RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 ERVK-7P63135 1459 aa15.96■□□□□ 0.15
GGA3-220ENST00000613421 RAD50Q92878 1312 aa15.96■□□□□ 0.15
GGA3-220ENST00000613421 KDM5DQ9BY66 1539 aa15.96■□□□□ 0.15
GGA3-220ENST00000613421 SYCP1Q15431 976 aa15.96■□□□□ 0.15
GGA3-220ENST00000613421 C16orf45Q96MC5 204 aaPredicted RBP15.96■□□□□ 0.15
GGA3-220ENST00000613421 PAG1Q9NWQ8 432 aa15.96■□□□□ 0.15
GGA3-220ENST00000613421 CLCN1P35523 988 aa15.96■□□□□ 0.14
GGA3-220ENST00000613421 PRIM1P49642 420 aaKnown RBP15.95■□□□□ 0.14
GGA3-220ENST00000613421 AXDND1Q5T1B0 1012 aaPredicted RBP15.95■□□□□ 0.14
GGA3-220ENST00000613421 ZFYVE27Q5T4F4 411 aa15.95■□□□□ 0.14
GGA3-220ENST00000613421 SLC26A6Q9BXS9 759 aa15.95■□□□□ 0.14
GGA3-220ENST00000613421 NEO1Q92859 1461 aa15.95■□□□□ 0.14
GGA3-220ENST00000613421 NLRP5P59047 1200 aa15.95■□□□□ 0.14
GGA3-220ENST00000613421 ZNF444Q8N0Y2 327 aaPredicted RBP15.95■□□□□ 0.14
GGA3-220ENST00000613421 BICC1Q9H694 974 aaKnown RBP15.95■□□□□ 0.14
GGA3-220ENST00000613421 DDX21Q9NR30 783 aaKnown RBP eCLIP15.95■□□□□ 0.14
GGA3-220ENST00000613421 EIF3JO75822 258 aaKnown RBP15.95■□□□□ 0.14
GGA3-220ENST00000613421 HOXB7P09629 217 aa15.95■□□□□ 0.14
GGA3-220ENST00000613421 KIAA1328Q86T90 577 aa15.94■□□□□ 0.14
GGA3-220ENST00000613421 DCAF5Q96JK2 942 aa15.94■□□□□ 0.14
GGA3-220ENST00000613421 LEKR1Q6ZMV7 388 aa15.94■□□□□ 0.14
GGA3-220ENST00000613421 TMC6Q7Z403 805 aa15.94■□□□□ 0.14
GGA3-220ENST00000613421 FAM200AQ8TCP9 573 aa15.94■□□□□ 0.14
GGA3-220ENST00000613421 PREX2Q70Z35 1606 aa15.94■□□□□ 0.14
GGA3-220ENST00000613421 TTC37Q6PGP7 1564 aa15.94■□□□□ 0.14
GGA3-220ENST00000613421 CCDC194A0A1B0GVG4 234 aa15.94■□□□□ 0.14
GGA3-220ENST00000613421 DACT1Q9NYF0 836 aa15.94■□□□□ 0.14
GGA3-220ENST00000613421 TFCP2Q12800 502 aa15.93■□□□□ 0.14
GGA3-220ENST00000613421 RUFY3Q7L099 469 aa15.93■□□□□ 0.14
GGA3-220ENST00000613421 TRMT2AQ8IZ69 625 aaKnown RBP15.93■□□□□ 0.14
GGA3-220ENST00000613421 TRMT1Q9NXH9 659 aaKnown RBP15.93■□□□□ 0.14
GGA3-220ENST00000613421 IQCEQ6IPM2 695 aa15.93■□□□□ 0.14
GGA3-220ENST00000613421 MYOM2P54296 1465 aa15.93■□□□□ 0.14
GGA3-220ENST00000613421 CCDC152Q4G0S7 254 aa15.93■□□□□ 0.14
GGA3-220ENST00000613421 ANO6Q4KMQ2 910 aa15.93■□□□□ 0.14
GGA3-220ENST00000613421 CCDC102BQ68D86 513 aa15.93■□□□□ 0.14
GGA3-220ENST00000613421 CABLES1Q8TDN4 633 aa15.93■□□□□ 0.14
GGA3-220ENST00000613421 C19orf44Q9H6X5 657 aa15.93■□□□□ 0.14
GGA3-220ENST00000613421 AOX1Q06278 1338 aa15.93■□□□□ 0.14
GGA3-220ENST00000613421 KIF24Q5T7B8 1368 aa15.93■□□□□ 0.14
GGA3-220ENST00000613421 KCNG4Q8TDN1 519 aa15.93■□□□□ 0.14
GGA3-220ENST00000613421 CCDC171Q6TFL3 1326 aa15.92■□□□□ 0.14
GGA3-220ENST00000613421 ZBTB43O43298 467 aa15.92■□□□□ 0.14
GGA3-220ENST00000613421 ZNF397Q8NF99 534 aaPredicted RBP15.92■□□□□ 0.14
GGA3-220ENST00000613421 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
GGA3-220ENST00000613421 MPHOSPH10O00566 681 aaKnown RBP15.92■□□□□ 0.14
GGA3-220ENST00000613421 ABCC4O15439 1325 aa15.92■□□□□ 0.14
GGA3-220ENST00000613421 USP19O94966 1318 aa15.92■□□□□ 0.14
GGA3-220ENST00000613421 ARHGEF10O15013 1369 aa15.92■□□□□ 0.14
GGA3-220ENST00000613421 URI1O94763 535 aaPredicted RBP15.92■□□□□ 0.14
GGA3-220ENST00000613421 KRT23Q9C075 422 aa15.92■□□□□ 0.14
GGA3-220ENST00000613421 ZNF76P36508 570 aa15.91■□□□□ 0.14
GGA3-220ENST00000613421 WTAPQ15007 396 aa15.91■□□□□ 0.14
GGA3-220ENST00000613421 MRPS27Q92552 414 aaKnown RBP15.91■□□□□ 0.14
GGA3-220ENST00000613421 ALG1Q9BT22 464 aa15.91■□□□□ 0.14
GGA3-220ENST00000613421 RNF113AO15541 343 aaKnown RBP15.91■□□□□ 0.14
GGA3-220ENST00000613421 PRDM15P57071 1507 aaPredicted RBP15.91■□□□□ 0.14
GGA3-220ENST00000613421 KIF5CO60282 957 aa15.91■□□□□ 0.14
GGA3-220ENST00000613421 TMCO3Q6UWJ1 677 aa15.91■□□□□ 0.14
GGA3-220ENST00000613421 CFAP74Q9C0B2 1584 aa15.91■□□□□ 0.14
GGA3-220ENST00000613421 KIF5BP33176 963 aa15.91■□□□□ 0.14
GGA3-220ENST00000613421 SYKP43405 635 aa15.91■□□□□ 0.14
GGA3-220ENST00000613421 SLC9C2Q5TAH2 1124 aa15.91■□□□□ 0.14
GGA3-220ENST00000613421 IL2RBP14784 551 aa15.9■□□□□ 0.14
GGA3-220ENST00000613421 CCDC148Q8NFR7 591 aa15.9■□□□□ 0.14
GGA3-220ENST00000613421 PLEKHG3A1L390 1219 aa15.9■□□□□ 0.14
GGA3-220ENST00000613421 CASQ1P31415 396 aa15.9■□□□□ 0.14
GGA3-220ENST00000613421 PDE4BQ07343 736 aa15.9■□□□□ 0.14
GGA3-220ENST00000613421 KANK3Q6NY19 840 aa15.9■□□□□ 0.14
GGA3-220ENST00000613421 CNNM2Q9H8M5 875 aa15.9■□□□□ 0.14
GGA3-220ENST00000613421 PRC1O43663 620 aa15.9■□□□□ 0.14
GGA3-220ENST00000613421 ISM2Q6H9L7 571 aa15.9■□□□□ 0.14
GGA3-220ENST00000613421 ZNF521Q96K83 1311 aa15.9■□□□□ 0.14
GGA3-220ENST00000613421 PNMA6EA0A0J9YXQ4 647 aa15.9■□□□□ 0.14
GGA3-220ENST00000613421 HMGB2P26583 209 aaKnown RBP15.9■□□□□ 0.14
GGA3-220ENST00000613421 FKBP15Q5T1M5 1219 aa15.9■□□□□ 0.14
GGA3-220ENST00000613421 TSPY2A6NKD2 308 aa15.89■□□□□ 0.13
GGA3-220ENST00000613421 SYT1P21579 422 aa15.89■□□□□ 0.13
GGA3-220ENST00000613421 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
GGA3-220ENST00000613421 RAB34Q9BZG1 259 aa15.89■□□□□ 0.13
GGA3-220ENST00000613421 ZKSCAN5Q9Y2L8 839 aa15.89■□□□□ 0.13
GGA3-220ENST00000613421 UGGT1Q9NYU2 1555 aa15.89■□□□□ 0.13
GGA3-220ENST00000613421 ZNF830Q96NB3 372 aaPredicted RBP15.89■□□□□ 0.13
GGA3-220ENST00000613421 SLF2Q8IX21 1173 aa15.89■□□□□ 0.13
GGA3-220ENST00000613421 CRACR2BQ8N4Y2 399 aaPredicted RBP15.89■□□□□ 0.13
GGA3-220ENST00000613421 CCDC150Q8NCX0 1101 aa15.89■□□□□ 0.13
GGA3-220ENST00000613421 PRIMPOLQ96LW4 560 aa15.89■□□□□ 0.13
GGA3-220ENST00000613421 PATL2C9JE40 543 aaKnown RBP15.89■□□□□ 0.13
GGA3-220ENST00000613421 SKIDA1Q1XH10 827 aa15.89■□□□□ 0.13
GGA3-220ENST00000613421 ZNF790Q6PG37 636 aa15.88■□□□□ 0.13
GGA3-220ENST00000613421 ERLIN2O94905 339 aa15.88■□□□□ 0.13
GGA3-220ENST00000613421 CPA1P15085 419 aa15.88■□□□□ 0.13
GGA3-220ENST00000613421 TMEM266Q2M3C6 531 aa15.88■□□□□ 0.13
GGA3-220ENST00000613421 DHX32Q7L7V1 743 aaKnown RBP15.88■□□□□ 0.13
GGA3-220ENST00000613421 TMTC2Q8N394 836 aa15.88■□□□□ 0.13
GGA3-220ENST00000613421 CPLX3Q8WVH0 158 aa15.88■□□□□ 0.13
GGA3-220ENST00000613421 PLEKHF1Q96S99 279 aa15.88■□□□□ 0.13
GGA3-220ENST00000613421 KAT14Q9H8E8 782 aa15.88■□□□□ 0.13
GGA3-220ENST00000613421 LGR6Q9HBX8 967 aa15.88■□□□□ 0.13
GGA3-220ENST00000613421 PODXL2Q9NZ53 605 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms