RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 PHF14O94880 888 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 HMGB2P26583 209 aaKnown RBP10.08□□□□□ -0.8
TARDBP-213ENST00000611963 PDE4AP27815 886 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 SSFA2P28290 1259 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 POLD1P28340 1107 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 TCIRG1Q13488 830 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 UBE3BQ7Z3V4 1068 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 PPP1R42Q7Z4L9 355 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 NPM2Q86SE8 214 aaKnown RBP10.08□□□□□ -0.8
TARDBP-213ENST00000611963 FLAD1Q8NFF5 587 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 GCC1Q96CN9 775 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 KAZALD1Q96I82 304 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 ISCA1Q9BUE6 129 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 LNPKQ9C0E8 428 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 BICC1Q9H694 974 aaKnown RBP10.08□□□□□ -0.8
TARDBP-213ENST00000611963 DCTPP1Q9H773 170 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 CWC25Q9NXE8 425 aaPredicted RBP10.08□□□□□ -0.8
TARDBP-213ENST00000611963 COL15A1P39059 1388 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 IBTKQ9P2D0 1353 aaPredicted RBP10.08□□□□□ -0.8
TARDBP-213ENST00000611963 SCN7AQ01118 1682 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 CNTNAP4Q9C0A0 1308 aa10.07□□□□□ -0.8
TARDBP-213ENST00000611963 A0A087WZG4 1122 aa10.07□□□□□ -0.8
TARDBP-213ENST00000611963 GNPATO15228 680 aa10.07□□□□□ -0.8
TARDBP-213ENST00000611963 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-213ENST00000611963 GPTP24298 496 aa10.07□□□□□ -0.8
TARDBP-213ENST00000611963 CASP7P55210 303 aa10.07□□□□□ -0.8
TARDBP-213ENST00000611963 NUCB1Q02818 461 aa10.07□□□□□ -0.8
TARDBP-213ENST00000611963 RTL5Q5HYW3 569 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-213ENST00000611963 EPHA10Q5JZY3 1008 aa10.07□□□□□ -0.8
TARDBP-213ENST00000611963 ANKRD45Q5TZF3 282 aa10.07□□□□□ -0.8
TARDBP-213ENST00000611963 GIGYF2Q6Y7W6 1299 aaKnown RBP10.07□□□□□ -0.8
TARDBP-213ENST00000611963 EXOC6BQ9Y2D4 811 aa10.07□□□□□ -0.8
TARDBP-213ENST00000611963 C4AP0C0L4 1744 aa10.07□□□□□ -0.8
TARDBP-213ENST00000611963 ERVV-1B6SEH8 477 aa10.06□□□□□ -0.8
TARDBP-213ENST00000611963 POTEB2H3BUK9 544 aa10.06□□□□□ -0.8
TARDBP-213ENST00000611963 SRGAP3O43295 1099 aa10.06□□□□□ -0.8
TARDBP-213ENST00000611963 SMARCA5O60264 1052 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-213ENST00000611963 CAMTA2O94983 1202 aa10.06□□□□□ -0.8
TARDBP-213ENST00000611963 RC3H1Q5TC82 1133 aaKnown RBP10.06□□□□□ -0.8
TARDBP-213ENST00000611963 ZNF467Q7Z7K2 595 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-213ENST00000611963 CHD1LQ86WJ1 897 aa10.06□□□□□ -0.8
TARDBP-213ENST00000611963 CCDC191Q8NCU4 936 aa10.06□□□□□ -0.8
TARDBP-213ENST00000611963 NLGN2Q8NFZ4 835 aa10.06□□□□□ -0.8
TARDBP-213ENST00000611963 SSH3Q8TE77 659 aa10.06□□□□□ -0.8
TARDBP-213ENST00000611963 BCL11AQ9H165 835 aa10.06□□□□□ -0.8
TARDBP-213ENST00000611963 UTRNP46939 3433 aa10.06□□□□□ -0.8
TARDBP-213ENST00000611963 H7C1W4 665 aa10.05□□□□□ -0.8
TARDBP-213ENST00000611963 PSEN1P49768 467 aa10.05□□□□□ -0.8
TARDBP-213ENST00000611963 HSP90AB3PQ58FF7 597 aa10.05□□□□□ -0.8
TARDBP-213ENST00000611963 TSHZ2Q9NRE2 1034 aa10.05□□□□□ -0.8
TARDBP-213ENST00000611963 HDAC5Q9UQL6 1122 aa10.05□□□□□ -0.8
TARDBP-213ENST00000611963 RGL2O15211 777 aa10.04□□□□□ -0.8
TARDBP-213ENST00000611963 RPS6KA4O75676 772 aa10.04□□□□□ -0.8
TARDBP-213ENST00000611963 TRIM28Q13263 835 aaKnown RBP10.04□□□□□ -0.8
TARDBP-213ENST00000611963 MTX1Q13505 466 aa10.04□□□□□ -0.8
TARDBP-213ENST00000611963 NLRP10Q86W26 655 aa10.04□□□□□ -0.8
TARDBP-213ENST00000611963 ARHGEF1Q92888 912 aaKnown RBP10.04□□□□□ -0.8
TARDBP-213ENST00000611963 SRP68Q9UHB9 627 aaKnown RBP10.04□□□□□ -0.8
TARDBP-213ENST00000611963 METRNQ9UJH8 293 aa10.04□□□□□ -0.8
TARDBP-213ENST00000611963 PA2G4Q9UQ80 394 aaKnown RBP10.04□□□□□ -0.8
TARDBP-213ENST00000611963 RTCBQ9Y3I0 505 aaKnown RBP10.04□□□□□ -0.8
TARDBP-213ENST00000611963 UBN2Q6ZU65 1347 aa10.04□□□□□ -0.8
TARDBP-213ENST00000611963 POTEFA5A3E0 1075 aa10.03□□□□□ -0.8
TARDBP-213ENST00000611963 SURF6O75683 361 aaKnown RBP10.03□□□□□ -0.8
TARDBP-213ENST00000611963 PCCAP05165 728 aaPredicted RBP10.03□□□□□ -0.8
TARDBP-213ENST00000611963 DDX60Q8IY21 1712 aaKnown RBP10.03□□□□□ -0.8
TARDBP-213ENST00000611963 ZNF34Q8IZ26 560 aa10.03□□□□□ -0.8
TARDBP-213ENST00000611963 SYNE4Q8N205 404 aa10.03□□□□□ -0.8
TARDBP-213ENST00000611963 FAM89AQ96GI7 184 aa10.03□□□□□ -0.8
TARDBP-213ENST00000611963 LAMB2P55268 1798 aa10.03□□□□□ -0.8
TARDBP-213ENST00000611963 GOLGB1Q14789 3259 aaKnown RBP10.02□□□□□ -0.81
TARDBP-213ENST00000611963 FAM177BA6PVY3 158 aa10.02□□□□□ -0.81
TARDBP-213ENST00000611963 YY1P25490 414 aa10.02□□□□□ -0.81
TARDBP-213ENST00000611963 FOXO4P98177 505 aa10.02□□□□□ -0.81
TARDBP-213ENST00000611963 RABL6Q3YEC7 729 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-213ENST00000611963 TRAPPC3LQ5T215 181 aa10.02□□□□□ -0.81
TARDBP-213ENST00000611963 LMBR1LQ6UX01 489 aa10.02□□□□□ -0.81
TARDBP-213ENST00000611963 C16orf71Q8IYS4 520 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-213ENST00000611963 OTUD7AQ8TE49 926 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-213ENST00000611963 COLQQ9Y215 455 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-213ENST00000611963 CHMP3Q9Y3E7 222 aa10.02□□□□□ -0.81
TARDBP-213ENST00000611963 SPEF2Q9C093 1822 aa10.01□□□□□ -0.81
TARDBP-213ENST00000611963 MMP10P09238 476 aa10.01□□□□□ -0.81
TARDBP-213ENST00000611963 GYS1P13807 737 aa10.01□□□□□ -0.81
TARDBP-213ENST00000611963 OS9Q13438 667 aaPredicted RBP10.01□□□□□ -0.81
TARDBP-213ENST00000611963 SUSD4Q5VX71 490 aa10.01□□□□□ -0.81
TARDBP-213ENST00000611963 USPL1Q5W0Q7 1092 aa10.01□□□□□ -0.81
TARDBP-213ENST00000611963 LHX8Q68G74 356 aa10.01□□□□□ -0.81
TARDBP-213ENST00000611963 ZBTB38Q8NAP3 1195 aaPredicted RBP10.01□□□□□ -0.81
TARDBP-213ENST00000611963 KLHDC4Q8TBB5 520 aa10.01□□□□□ -0.81
TARDBP-213ENST00000611963 TRMT112Q9UI30 125 aaKnown RBP10.01□□□□□ -0.81
TARDBP-213ENST00000611963 NIP7Q9Y221 180 aaKnown RBP eCLIP10.01□□□□□ -0.81
TARDBP-213ENST00000611963 ZNF652Q9Y2D9 606 aa10.01□□□□□ -0.81
TARDBP-213ENST00000611963 CD2APQ9Y5K6 639 aa10.01□□□□□ -0.81
TARDBP-213ENST00000611963 AK9Q5TCS8 1911 aa10□□□□□ -0.81
TARDBP-213ENST00000611963 RAB11FIP3O75154 756 aa10□□□□□ -0.81
TARDBP-213ENST00000611963 YBX3P16989 372 aaKnown RBP eCLIP10□□□□□ -0.818e-13■□□□□ 8.1
TARDBP-213ENST00000611963 RFX5P48382 616 aaPredicted RBP10□□□□□ -0.81
TARDBP-213ENST00000611963 LRRCC1Q9C099 1032 aa10□□□□□ -0.81
TARDBP-213ENST00000611963 SIL1Q9H173 461 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms