RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 SUPT16HQ9Y5B9 1047 aaKnown RBP10.89□□□□□ -0.67
FAM228B-206ENST00000611138 RNF123Q5XPI4 1314 aa10.88□□□□□ -0.67
FAM228B-206ENST00000611138 GRM8O00222 908 aa10.88□□□□□ -0.67
FAM228B-206ENST00000611138 PCCAP05165 728 aaPredicted RBP10.88□□□□□ -0.67
FAM228B-206ENST00000611138 MS4A1P11836 297 aa10.88□□□□□ -0.67
FAM228B-206ENST00000611138 HCLS1P14317 486 aaPredicted RBP10.88□□□□□ -0.67
FAM228B-206ENST00000611138 RIC1Q4ADV7 1423 aa10.88□□□□□ -0.67
FAM228B-206ENST00000611138 INTS3Q68E01 1043 aaKnown RBP10.88□□□□□ -0.67
FAM228B-206ENST00000611138 ITPRIPQ8IWB1 547 aa10.88□□□□□ -0.67
FAM228B-206ENST00000611138 ZBTB38Q8NAP3 1195 aaPredicted RBP10.88□□□□□ -0.67
FAM228B-206ENST00000611138 POTEB2H3BUK9 544 aa10.87□□□□□ -0.67
FAM228B-206ENST00000611138 IRS4O14654 1257 aaPredicted RBP10.87□□□□□ -0.67
FAM228B-206ENST00000611138 FHDC1Q9C0D6 1143 aaPredicted RBP10.87□□□□□ -0.67
FAM228B-206ENST00000611138 COG6Q9Y2V7 657 aa10.87□□□□□ -0.67
FAM228B-206ENST00000611138 CDHR2Q9BYE9 1310 aa10.86□□□□□ -0.67
FAM228B-206ENST00000611138 COL4A1P02462 1669 aa10.86□□□□□ -0.67
FAM228B-206ENST00000611138 A0A1B0GUL6 1792 aa10.86□□□□□ -0.67
FAM228B-206ENST00000611138 H7C1W4 665 aa10.86□□□□□ -0.67
FAM228B-206ENST00000611138 NBPF7P0C2Y1 421 aaPredicted RBP10.86□□□□□ -0.67
FAM228B-206ENST00000611138 CHRNA5P30532 468 aa10.86□□□□□ -0.67
FAM228B-206ENST00000611138 CASP7P55210 303 aa10.86□□□□□ -0.67
FAM228B-206ENST00000611138 C3orf67Q6ZVT6 689 aa10.86□□□□□ -0.67
FAM228B-206ENST00000611138 MEIS3Q99687 375 aa10.86□□□□□ -0.67
FAM228B-206ENST00000611138 BRIP1Q9BX63 1249 aa10.86□□□□□ -0.67
FAM228B-206ENST00000611138 ARFGEF1Q9Y6D6 1849 aa10.86□□□□□ -0.67
FAM228B-206ENST00000611138 PDE6BP35913 854 aa10.85□□□□□ -0.67
FAM228B-206ENST00000611138 PDE3AQ14432 1141 aa10.85□□□□□ -0.67
FAM228B-206ENST00000611138 MVPQ14764 893 aaKnown RBP10.85□□□□□ -0.67
FAM228B-206ENST00000611138 C2CD5Q86YS7 1000 aa10.85□□□□□ -0.67
FAM228B-206ENST00000611138 NLGN2Q8NFZ4 835 aa10.85□□□□□ -0.67
FAM228B-206ENST00000611138 CCDC85AQ96PX6 553 aaPredicted RBP10.85□□□□□ -0.67
FAM228B-206ENST00000611138 USP44Q9H0E7 712 aa10.85□□□□□ -0.67
FAM228B-206ENST00000611138 WWC3Q9ULE0 1092 aa10.85□□□□□ -0.67
FAM228B-206ENST00000611138 CD2APQ9Y5K6 639 aa10.85□□□□□ -0.67
FAM228B-206ENST00000611138 SLX4Q8IY92 1834 aa10.85□□□□□ -0.67
FAM228B-206ENST00000611138 UTYO14607 1347 aa10.84□□□□□ -0.67
FAM228B-206ENST00000611138 PDE8AO60658 829 aa10.84□□□□□ -0.67
FAM228B-206ENST00000611138 UBTFL1P0CB47 393 aaPredicted RBP10.84□□□□□ -0.67
FAM228B-206ENST00000611138 DPEP1P16444 411 aa10.84□□□□□ -0.67
FAM228B-206ENST00000611138 IRX6P78412 446 aaPredicted RBP10.84□□□□□ -0.67
FAM228B-206ENST00000611138 SLC10A5Q5PT55 438 aa10.84□□□□□ -0.67
FAM228B-206ENST00000611138 SUCLG2Q96I99 432 aa10.84□□□□□ -0.67
FAM228B-206ENST00000611138 NLRP3Q96P20 1036 aa10.84□□□□□ -0.67
FAM228B-206ENST00000611138 LRRC37AA6NMS7 1700 aa10.84□□□□□ -0.67
FAM228B-206ENST00000611138 A0A0G2JLW4 131 aa10.83□□□□□ -0.68
FAM228B-206ENST00000611138 H0YIN7 160 aa10.83□□□□□ -0.68
FAM228B-206ENST00000611138 HSP90B1P14625 803 aaKnown RBP10.83□□□□□ -0.68
FAM228B-206ENST00000611138 CTSWP56202 376 aa10.83□□□□□ -0.68
FAM228B-206ENST00000611138 EPHA10Q5JZY3 1008 aa10.83□□□□□ -0.68
FAM228B-206ENST00000611138 RPGRQ92834 1020 aaKnown RBP10.83□□□□□ -0.68
FAM228B-206ENST00000611138 CRBNQ96SW2 442 aa10.83□□□□□ -0.68
FAM228B-206ENST00000611138 SYT17Q9BSW7 474 aa10.83□□□□□ -0.68
FAM228B-206ENST00000611138 C1orf115Q9H7X2 142 aa10.83□□□□□ -0.68
FAM228B-206ENST00000611138 CHMP3Q9Y3E7 222 aa10.83□□□□□ -0.68
FAM228B-206ENST00000611138 LRRFIP2Q9Y608 721 aaKnown RBP10.83□□□□□ -0.68
FAM228B-206ENST00000611138 GNAI3P08754 354 aa10.82□□□□□ -0.68
FAM228B-206ENST00000611138 TGFB2P61812 414 aa10.82□□□□□ -0.68
FAM228B-206ENST00000611138 FOXO4P98177 505 aa10.82□□□□□ -0.68
FAM228B-206ENST00000611138 ZNF622Q969S3 477 aaKnown RBP eCLIP10.82□□□□□ -0.68
FAM228B-206ENST00000611138 KAZALD1Q96I82 304 aa10.82□□□□□ -0.68
FAM228B-206ENST00000611138 PLA2G12BQ9BX93 195 aa10.82□□□□□ -0.68
FAM228B-206ENST00000611138 BICC1Q9H694 974 aaKnown RBP10.82□□□□□ -0.68
FAM228B-206ENST00000611138 DDX19BQ9UMR2 479 aa10.82□□□□□ -0.68
FAM228B-206ENST00000611138 SRCAPQ6ZRS2 3230 aa10.81□□□□□ -0.68
FAM228B-206ENST00000611138 KLRG2A4D1S0 409 aaPredicted RBP10.81□□□□□ -0.68
FAM228B-206ENST00000611138 ZBTB7BO15156 539 aaPredicted RBP10.81□□□□□ -0.68
FAM228B-206ENST00000611138 GNAI2P04899 355 aa10.81□□□□□ -0.68
FAM228B-206ENST00000611138 SRGNP10124 158 aa10.81□□□□□ -0.68
FAM228B-206ENST00000611138 NPR1P16066 1061 aa10.81□□□□□ -0.68
FAM228B-206ENST00000611138 FAM161AQ3B820 660 aa10.81□□□□□ -0.68
FAM228B-206ENST00000611138 CRY2Q49AN0 593 aa10.81□□□□□ -0.68
FAM228B-206ENST00000611138 CCDC152Q4G0S7 254 aa10.81□□□□□ -0.68
FAM228B-206ENST00000611138 LMBR1LQ6UX01 489 aa10.81□□□□□ -0.68
FAM228B-206ENST00000611138 GREM2Q9H772 168 aa10.81□□□□□ -0.68
FAM228B-206ENST00000611138 CCDC88AQ3V6T2 1871 aa10.81□□□□□ -0.68
FAM228B-206ENST00000611138 KCNA3P22001 575 aa10.8□□□□□ -0.68
FAM228B-206ENST00000611138 SF3B3Q15393 1217 aaKnown RBP10.8□□□□□ -0.68
FAM228B-206ENST00000611138 STYK1Q6J9G0 422 aa10.8□□□□□ -0.68
FAM228B-206ENST00000611138 DDX46Q7L014 1031 aaKnown RBP10.8□□□□□ -0.68
FAM228B-206ENST00000611138 ANKRD44Q8N8A2 993 aa10.8□□□□□ -0.68
FAM228B-206ENST00000611138 TTLL11Q8NHH1 800 aa10.8□□□□□ -0.68
FAM228B-206ENST00000611138 MASTLQ96GX5 879 aa10.8□□□□□ -0.68
FAM228B-206ENST00000611138 RBM17Q96I25 401 aaKnown RBP10.8□□□□□ -0.68
FAM228B-206ENST00000611138 SEC31BQ9NQW1 1179 aa10.8□□□□□ -0.68
FAM228B-206ENST00000611138 PDZRN3Q9UPQ7 1066 aa10.8□□□□□ -0.68
FAM228B-206ENST00000611138 RTL9Q8NET4 1388 aa10.79□□□□□ -0.68
FAM228B-206ENST00000611138 FER1L6Q2WGJ9 1857 aa10.79□□□□□ -0.68
FAM228B-206ENST00000611138 CSF1RP07333 972 aa10.79□□□□□ -0.68
FAM228B-206ENST00000611138 PELP1Q8IZL8 1130 aaKnown RBP10.79□□□□□ -0.68
FAM228B-206ENST00000611138 PIM2Q9P1W9 311 aa10.79□□□□□ -0.68
FAM228B-206ENST00000611138 HDAC5Q9UQL6 1122 aa10.79□□□□□ -0.68
FAM228B-206ENST00000611138 LTBP1Q14766 1721 aa10.78□□□□□ -0.68
FAM228B-206ENST00000611138 ITGA6P23229 1130 aa10.78□□□□□ -0.68
FAM228B-206ENST00000611138 HOXA10P31260 410 aaPredicted RBP10.78□□□□□ -0.68
FAM228B-206ENST00000611138 GRAPQ13588 217 aa10.78□□□□□ -0.68
FAM228B-206ENST00000611138 RABL6Q3YEC7 729 aaPredicted RBP10.78□□□□□ -0.68
FAM228B-206ENST00000611138 PRPF40BQ6NWY9 871 aaKnown RBP10.78□□□□□ -0.68
FAM228B-206ENST00000611138 SLC51AQ86UW1 340 aa10.78□□□□□ -0.68
FAM228B-206ENST00000611138 TTLL6Q8N841 843 aa10.78□□□□□ -0.68
FAM228B-206ENST00000611138 EXOC6Q8TAG9 804 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms