RNA–Protein interactions for RNA: ENST00000610559.4

DDX3X-207, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 4

Gene DDX3X, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-207ENST00000610559 MYO3AQ8NEV4 1616 aa12□□□□□ -0.49
DDX3X-207ENST00000610559 CLTCQ00610 1675 aaKnown RBP12□□□□□ -0.49
DDX3X-207ENST00000610559 TNFRSF10AO00220 468 aa12□□□□□ -0.49
DDX3X-207ENST00000610559 POLIQ9UNA4 740 aa12□□□□□ -0.49
DDX3X-207ENST00000610559 GPR182O15218 404 aa11.99□□□□□ -0.49
DDX3X-207ENST00000610559 TXLNAP40222 546 aa11.99□□□□□ -0.49
DDX3X-207ENST00000610559 EHHADHQ08426 723 aa11.99□□□□□ -0.49
DDX3X-207ENST00000610559 C1orf53Q5VUE5 145 aa11.99□□□□□ -0.49
DDX3X-207ENST00000610559 MEIOBQ8N635 442 aa11.99□□□□□ -0.49
DDX3X-207ENST00000610559 PLXNC1O60486 1568 aa11.99□□□□□ -0.49
DDX3X-207ENST00000610559 TCF3P15923 654 aa11.98□□□□□ -0.49
DDX3X-207ENST00000610559 PDE3BQ13370 1112 aa11.98□□□□□ -0.49
DDX3X-207ENST00000610559 INO80Q9ULG1 1556 aaPredicted RBP11.97□□□□□ -0.49
DDX3X-207ENST00000610559 MZF1P28698 734 aaPredicted RBP11.97□□□□□ -0.49
DDX3X-207ENST00000610559 GTF2E1P29083 439 aaPredicted RBP11.97□□□□□ -0.49
DDX3X-207ENST00000610559 GPC1P35052 558 aa11.97□□□□□ -0.49
DDX3X-207ENST00000610559 ZAP70P43403 619 aa11.97□□□□□ -0.49
DDX3X-207ENST00000610559 MAPK8P45983 427 aa11.97□□□□□ -0.49
DDX3X-207ENST00000610559 RNF144AP50876 292 aaPredicted RBP11.97□□□□□ -0.49
DDX3X-207ENST00000610559 DNM1Q05193 864 aaKnown RBP11.97□□□□□ -0.49
DDX3X-207ENST00000610559 EDEM1Q92611 657 aa11.97□□□□□ -0.49
DDX3X-207ENST00000610559 PLA2G2EQ9NZK7 142 aa11.97□□□□□ -0.49
DDX3X-207ENST00000610559 RECKO95980 971 aa11.96□□□□□ -0.49
DDX3X-207ENST00000610559 C4orf17Q53FE4 359 aa11.96□□□□□ -0.49
DDX3X-207ENST00000610559 SLC27A3Q5K4L6 730 aa11.96□□□□□ -0.49
DDX3X-207ENST00000610559 GJD3Q8N144 294 aa11.96□□□□□ -0.49
DDX3X-207ENST00000610559 C7orf43Q8WVR3 580 aa11.96□□□□□ -0.49
DDX3X-207ENST00000610559 HPS1Q92902 700 aa11.96□□□□□ -0.49
DDX3X-207ENST00000610559 ALKBH8Q96BT7 664 aaKnown RBP11.96□□□□□ -0.49
DDX3X-207ENST00000610559 INSM2Q96T92 566 aaPredicted RBP11.96□□□□□ -0.49
DDX3X-207ENST00000610559 NIF3L1Q9GZT8 377 aa11.96□□□□□ -0.49
DDX3X-207ENST00000610559 BCS1LQ9Y276 419 aa11.96□□□□□ -0.49
DDX3X-207ENST00000610559 NPATQ14207 1427 aa11.95□□□□□ -0.5
DDX3X-207ENST00000610559 PDGFAP04085 211 aa11.95□□□□□ -0.5
DDX3X-207ENST00000610559 LDHBP07195 334 aaKnown RBP11.95□□□□□ -0.5
DDX3X-207ENST00000610559 TRIM67Q6ZTA4 783 aa11.95□□□□□ -0.5
DDX3X-207ENST00000610559 CEP170BQ9Y4F5 1589 aaPredicted RBP11.95□□□□□ -0.5
DDX3X-207ENST00000610559 SYCP2Q9BX26 1530 aa11.95□□□□□ -0.5
DDX3X-207ENST00000610559 TCOF1Q13428 1488 aaKnown RBP11.95□□□□□ -0.5
DDX3X-207ENST00000610559 PLA2G4AP47712 749 aa11.94□□□□□ -0.5
DDX3X-207ENST00000610559 GNASQ5JWF2 1037 aa11.94□□□□□ -0.5
DDX3X-207ENST00000610559 TREML1Q86YW5 311 aa11.94□□□□□ -0.5
DDX3X-207ENST00000610559 TSEN34Q9BSV6 310 aaKnown RBP11.94□□□□□ -0.5
DDX3X-207ENST00000610559 WWC3Q9ULE0 1092 aa11.94□□□□□ -0.5
DDX3X-207ENST00000610559 CLIP1P30622 1438 aa11.94□□□□□ -0.5
DDX3X-207ENST00000610559 CNTLNQ9NXG0 1405 aa11.94□□□□□ -0.5
DDX3X-207ENST00000610559 ZNF335Q9H4Z2 1342 aaPredicted RBP11.93□□□□□ -0.5
DDX3X-207ENST00000610559 SPINT1O43278 529 aa11.93□□□□□ -0.5
DDX3X-207ENST00000610559 MRPL58Q14197 206 aaKnown RBP11.93□□□□□ -0.5
DDX3X-207ENST00000610559 RNF19AQ9NV58 838 aa11.93□□□□□ -0.5
DDX3X-207ENST00000610559 POLR1AO95602 1720 aaPredicted RBP11.93□□□□□ -0.5
DDX3X-207ENST00000610559 ALKQ9UM73 1620 aa11.93□□□□□ -0.5
DDX3X-207ENST00000610559 ATP7AQ04656 1500 aa11.92□□□□□ -0.5
DDX3X-207ENST00000610559 PLA2R1Q13018 1463 aa11.92□□□□□ -0.5
DDX3X-207ENST00000610559 USP5P45974 858 aa11.92□□□□□ -0.5
DDX3X-207ENST00000610559 TSNAXIP1Q2TAA8 658 aa11.92□□□□□ -0.5
DDX3X-207ENST00000610559 AIDAQ96BJ3 306 aa11.92□□□□□ -0.5
DDX3X-207ENST00000610559 KLRG1Q96E93 195 aa11.92□□□□□ -0.5
DDX3X-207ENST00000610559 PTPRKQ15262 1439 aa11.92□□□□□ -0.5
DDX3X-207ENST00000610559 CASKIN1Q8WXD9 1431 aa11.92□□□□□ -0.5
DDX3X-207ENST00000610559 NEURL4Q96JN8 1562 aa11.92□□□□□ -0.5
DDX3X-207ENST00000610559 DNMT1P26358 1616 aaKnown RBP11.91□□□□□ -0.5
DDX3X-207ENST00000610559 PRPF40AO75400 957 aaKnown RBP11.91□□□□□ -0.5
DDX3X-207ENST00000610559 CTSOP43234 321 aaPredicted RBP11.91□□□□□ -0.5
DDX3X-207ENST00000610559 PHKA2P46019 1235 aa11.91□□□□□ -0.5
DDX3X-207ENST00000610559 GPR152Q8TDT2 470 aa11.91□□□□□ -0.5
DDX3X-207ENST00000610559 SETDB2Q96T68 719 aa11.91□□□□□ -0.5
DDX3X-207ENST00000610559 DUSP9Q99956 384 aaKnown RBP11.91□□□□□ -0.5
DDX3X-207ENST00000610559 BACH2Q9BYV9 841 aa11.91□□□□□ -0.5
DDX3X-207ENST00000610559 BCL11AQ9H165 835 aa11.91□□□□□ -0.5
DDX3X-207ENST00000610559 PARP2Q9UGN5 583 aa11.91□□□□□ -0.5
DDX3X-207ENST00000610559 ZMYM3Q14202 1370 aa11.91□□□□□ -0.5
DDX3X-207ENST00000610559 GPATCH8Q9UKJ3 1502 aaKnown RBP11.91□□□□□ -0.5
DDX3X-207ENST00000610559 ADGBQ8N7X0 1667 aa11.91□□□□□ -0.5
DDX3X-207ENST00000610559 CCDC18Q5T9S5 1454 aa11.9□□□□□ -0.5
DDX3X-207ENST00000610559 SPATA31C2B4DYI2 1134 aa11.9□□□□□ -0.5
DDX3X-207ENST00000610559 PRR20EP86478 221 aa11.9□□□□□ -0.5
DDX3X-207ENST00000610559 PRR20CP86479 221 aa11.9□□□□□ -0.5
DDX3X-207ENST00000610559 PRR20DP86480 221 aa11.9□□□□□ -0.5
DDX3X-207ENST00000610559 PRR20BP86481 221 aa11.9□□□□□ -0.5
DDX3X-207ENST00000610559 PRR20AP86496 221 aa11.9□□□□□ -0.5
DDX3X-207ENST00000610559 RHPN1Q8TCX5 695 aa11.9□□□□□ -0.5
DDX3X-207ENST00000610559 FAM161BQ96MY7 647 aa11.9□□□□□ -0.5
DDX3X-207ENST00000610559 POLMQ9NP87 494 aaPredicted RBP11.9□□□□□ -0.5
DDX3X-207ENST00000610559 CDK11AQ9UQ88 783 aaPredicted RBP11.9□□□□□ -0.5
DDX3X-207ENST00000610559 MED1Q15648 1581 aaPredicted RBP11.89□□□□□ -0.51
DDX3X-207ENST00000610559 MICAL2O94851 1124 aa11.89□□□□□ -0.51
DDX3X-207ENST00000610559 FGD1P98174 961 aa11.89□□□□□ -0.51
DDX3X-207ENST00000610559 XPCQ01831 940 aaPredicted RBP11.89□□□□□ -0.51
DDX3X-207ENST00000610559 ENOX2Q16206 610 aaKnown RBP11.89□□□□□ -0.51
DDX3X-207ENST00000610559 LINC00528Q8N1L1 170 aa11.89□□□□□ -0.51
DDX3X-207ENST00000610559 NUDT16Q96DE0 195 aaKnown RBP11.89□□□□□ -0.51
DDX3X-207ENST00000610559 GGNBP2Q9H3C7 697 aa11.89□□□□□ -0.51
DDX3X-207ENST00000610559 ZDHHC3Q9NYG2 299 aa11.89□□□□□ -0.51
DDX3X-207ENST00000610559 STRCP1A6NGW2 1772 aa11.89□□□□□ -0.51
DDX3X-207ENST00000610559 NBPF1Q3BBV0 1214 aa11.88□□□□□ -0.51
DDX3X-207ENST00000610559 LDLRAD1Q5T700 205 aa11.88□□□□□ -0.51
DDX3X-207ENST00000610559 ZNF280CQ8ND82 737 aa11.88□□□□□ -0.51
DDX3X-207ENST00000610559 PNMA6FA0A0J9YX94 578 aa11.87□□□□□ -0.51
DDX3X-207ENST00000610559 OPLAHO14841 1288 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms