RNA–Protein interactions for RNA: ENST00000610096.1

SYT6-207, Transcript of synaptotagmin 6, humanhuman

TSL 1 (best)

Gene SYT6, Length 1,897 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT6-207ENST00000610096 GREM2Q9H772 168 aa29.17■■■□□ 2.26
SYT6-207ENST00000610096 PA2G4Q9UQ80 394 aaKnown RBP29.17■■■□□ 2.26
SYT6-207ENST00000610096 HDAC5Q9UQL6 1122 aa29.17■■■□□ 2.26
SYT6-207ENST00000610096 SPEF2Q9C093 1822 aa29.16■■■□□ 2.26
SYT6-207ENST00000610096 MTX1Q13505 466 aa29.15■■■□□ 2.26
SYT6-207ENST00000610096 PELP1Q8IZL8 1130 aaKnown RBP29.15■■■□□ 2.26
SYT6-207ENST00000610096 ST5P78524 1137 aa29.14■■■□□ 2.26
SYT6-207ENST00000610096 HDAC1Q13547 482 aaPredicted RBP29.14■■■□□ 2.26
SYT6-207ENST00000610096 SSH3Q8TE77 659 aa29.14■■■□□ 2.26
SYT6-207ENST00000610096 CSF1RP07333 972 aa29.14■■■□□ 2.26
SYT6-207ENST00000610096 POLA2Q14181 598 aa29.14■■■□□ 2.26
SYT6-207ENST00000610096 SLC10A5Q5PT55 438 aa29.14■■■□□ 2.26
SYT6-207ENST00000610096 ZNF594Q96JF6 807 aaPredicted RBP29.14■■■□□ 2.26
SYT6-207ENST00000610096 RWDD1Q9H446 243 aaPredicted RBP29.14■■■□□ 2.26
SYT6-207ENST00000610096 MTFR1LQ9H019 292 aa29.13■■■□□ 2.25
SYT6-207ENST00000610096 SEC31BQ9NQW1 1179 aa29.12■■■□□ 2.25
SYT6-207ENST00000610096 EXOC6BQ9Y2D4 811 aa29.12■■■□□ 2.25
SYT6-207ENST00000610096 KDM2BQ8NHM5 1336 aa29.12■■■□□ 2.25
SYT6-207ENST00000610096 APBB1O00213 710 aa29.12■■■□□ 2.25
SYT6-207ENST00000610096 RFX5P48382 616 aaPredicted RBP29.11■■■□□ 2.25
SYT6-207ENST00000610096 BCL11AQ9H165 835 aa29.11■■■□□ 2.25
SYT6-207ENST00000610096 SIL1Q9H173 461 aa29.11■■■□□ 2.25
SYT6-207ENST00000610096 NLRP3Q96P20 1036 aa29.1■■■□□ 2.25
SYT6-207ENST00000610096 COL11A2P13942 1736 aaPredicted RBP29.1■■■□□ 2.25
SYT6-207ENST00000610096 HMMRO75330 724 aa29.1■■■□□ 2.25
SYT6-207ENST00000610096 ITGA6P23229 1130 aa29.1■■■□□ 2.25
SYT6-207ENST00000610096 PTPN12Q05209 780 aaKnown RBP29.08■■■□□ 2.25
SYT6-207ENST00000610096 CCDC57Q2TAC2 916 aa29.08■■■□□ 2.25
SYT6-207ENST00000610096 CCDC152Q4G0S7 254 aa29.08■■■□□ 2.25
SYT6-207ENST00000610096 SKAP1Q86WV1 359 aa29.08■■■□□ 2.25
SYT6-207ENST00000610096 SURF6O75683 361 aaKnown RBP29.07■■■□□ 2.24
SYT6-207ENST00000610096 IFIT5Q13325 482 aaKnown RBP29.07■■■□□ 2.24
SYT6-207ENST00000610096 SOCS7O14512 581 aa29.06■■■□□ 2.24
SYT6-207ENST00000610096 HSP90B1P14625 803 aaKnown RBP29.06■■■□□ 2.24
SYT6-207ENST00000610096 SF3B3Q15393 1217 aaKnown RBP29.06■■■□□ 2.24
SYT6-207ENST00000610096 PUS3Q9BZE2 481 aaKnown RBP29.05■■■□□ 2.24
SYT6-207ENST00000610096 DCTPP1Q9H773 170 aa29.05■■■□□ 2.24
SYT6-207ENST00000610096 CACNA1SQ13698 1873 aa29.05■■■□□ 2.24
SYT6-207ENST00000610096 RIC1Q4ADV7 1423 aa29.05■■■□□ 2.24
SYT6-207ENST00000610096 SLC51AQ86UW1 340 aa29.04■■■□□ 2.24
SYT6-207ENST00000610096 ANKRD18BA2A2Z9 1011 aa29.04■■■□□ 2.24
SYT6-207ENST00000610096 CENPQQ7L2Z9 268 aaPredicted RBP29.04■■■□□ 2.24
SYT6-207ENST00000610096 BRIP1Q9BX63 1249 aa29.04■■■□□ 2.24
SYT6-207ENST00000610096 POLD1P28340 1107 aa29.03■■■□□ 2.24
SYT6-207ENST00000610096 LRRC24Q50LG9 513 aa29.03■■■□□ 2.24
SYT6-207ENST00000610096 TAF7LQ5H9L4 462 aa29.03■■■□□ 2.24
SYT6-207ENST00000610096 SGIP1Q9BQI5 828 aa29.03■■■□□ 2.24
SYT6-207ENST00000610096 PTGER2P43116 358 aa29.02■■■□□ 2.24
SYT6-207ENST00000610096 CELF1Q92879 486 aaKnown RBP29.02■■■□□ 2.24
SYT6-207ENST00000610096 C10orf71Q711Q0 1435 aa29.02■■■□□ 2.24
SYT6-207ENST00000610096 SMC5Q8IY18 1101 aa29.02■■■□□ 2.24
SYT6-207ENST00000610096 COPRSQ9NQ92 184 aa29.02■■■□□ 2.24
SYT6-207ENST00000610096 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.02■■■□□ 2.24
SYT6-207ENST00000610096 SMARCA5O60264 1052 aaPredicted RBP29.01■■■□□ 2.23
SYT6-207ENST00000610096 CRY2Q49AN0 593 aa29.01■■■□□ 2.23
SYT6-207ENST00000610096 OS9Q13438 667 aaPredicted RBP29■■■□□ 2.23
SYT6-207ENST00000610096 RPGRQ92834 1020 aaKnown RBP29■■■□□ 2.23
SYT6-207ENST00000610096 RTL9Q8NET4 1388 aa29■■■□□ 2.23
SYT6-207ENST00000610096 CHRNA5P30532 468 aa29■■■□□ 2.23
SYT6-207ENST00000610096 LRP5O75197 1615 aa28.99■■■□□ 2.23
SYT6-207ENST00000610096 KIF13BQ9NQT8 1826 aa28.99■■■□□ 2.23
SYT6-207ENST00000610096 KLHL34Q8N239 644 aa28.99■■■□□ 2.23
SYT6-207ENST00000610096 GCC1Q96CN9 775 aa28.99■■■□□ 2.23
SYT6-207ENST00000610096 PPP1R1BQ9UD71 204 aaPredicted RBP28.98■■■□□ 2.23
SYT6-207ENST00000610096 NOP58Q9Y2X3 529 aaKnown RBP28.98■■■□□ 2.23
SYT6-207ENST00000610096 KLRG2A4D1S0 409 aaPredicted RBP28.97■■■□□ 2.23
SYT6-207ENST00000610096 ANKRD45Q5TZF3 282 aa28.97■■■□□ 2.23
SYT6-207ENST00000610096 DDX46Q7L014 1031 aaKnown RBP28.97■■■□□ 2.23
SYT6-207ENST00000610096 ATG9AQ7Z3C6 839 aa28.97■■■□□ 2.23
SYT6-207ENST00000610096 PDE6BP35913 854 aa28.97■■■□□ 2.23
SYT6-207ENST00000610096 SRGNP10124 158 aa28.96■■■□□ 2.23
SYT6-207ENST00000610096 G3BP1Q13283 466 aaKnown RBP eCLIP28.96■■■□□ 2.23
SYT6-207ENST00000610096 LDHAL6AQ6ZMR3 332 aa28.96■■■□□ 2.23
SYT6-207ENST00000610096 C2CD5Q86YS7 1000 aa28.96■■■□□ 2.23
SYT6-207ENST00000610096 IL1RAPL2Q9NP60 686 aa28.96■■■□□ 2.23
SYT6-207ENST00000610096 PDZRN3Q9UPQ7 1066 aa28.96■■■□□ 2.23
SYT6-207ENST00000610096 SASH1O94885 1247 aa28.95■■■□□ 2.23
SYT6-207ENST00000610096 EYA2O00167 538 aa28.95■■■□□ 2.22
SYT6-207ENST00000610096 LNPKQ9C0E8 428 aa28.95■■■□□ 2.22
SYT6-207ENST00000610096 CNNM1Q9NRU3 951 aa28.95■■■□□ 2.22
SYT6-207ENST00000610096 ANKRD18AQ8IVF6 992 aa28.94■■■□□ 2.22
SYT6-207ENST00000610096 CDC5LQ99459 802 aaKnown RBP28.94■■■□□ 2.22
SYT6-207ENST00000610096 KIAA1551Q9HCM1 1747 aa28.94■■■□□ 2.22
SYT6-207ENST00000610096 A0A1B0GUL6 1792 aa28.94■■■□□ 2.22
SYT6-207ENST00000610096 IGHMBP2P38935 993 aaKnown RBP28.93■■■□□ 2.22
SYT6-207ENST00000610096 RHPN1Q8TCX5 695 aa28.93■■■□□ 2.22
SYT6-207ENST00000610096 MPHOSPH8Q99549 860 aa28.93■■■□□ 2.22
SYT6-207ENST00000610096 SPON1Q9HCB6 807 aa28.93■■■□□ 2.22
SYT6-207ENST00000610096 ZNF622Q969S3 477 aaKnown RBP eCLIP28.93■■■□□ 2.22
SYT6-207ENST00000610096 WWC3Q9ULE0 1092 aa28.93■■■□□ 2.22
SYT6-207ENST00000610096 TFCP2Q12800 502 aa28.92■■■□□ 2.22
SYT6-207ENST00000610096 GRAPQ13588 217 aa28.92■■■□□ 2.22
SYT6-207ENST00000610096 GRAPLQ8TC17 118 aaPredicted RBP28.92■■■□□ 2.22
SYT6-207ENST00000610096 RBM17Q96I25 401 aaKnown RBP28.92■■■□□ 2.22
SYT6-207ENST00000610096 DLEC1Q9Y238 1755 aa28.92■■■□□ 2.22
SYT6-207ENST00000610096 RPS8P62241 208 aaKnown RBP28.91■■■□□ 2.22
SYT6-207ENST00000610096 NUCB1Q02818 461 aa28.91■■■□□ 2.22
SYT6-207ENST00000610096 HELBQ8NG08 1087 aaPredicted RBP28.91■■■□□ 2.22
SYT6-207ENST00000610096 LRRCC1Q9C099 1032 aa28.91■■■□□ 2.22
SYT6-207ENST00000610096 A0A0G2JLW4 131 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms