RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 JPH2Q9BR39 696 aaPredicted RBP5.49□□□□□ -1.53
HDDC2-208ENST00000609021 ARGLU1Q9NWB6 273 aaPredicted RBP5.49□□□□□ -1.53
HDDC2-208ENST00000609021 SPATA7Q9P0W8 599 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 CHMP3Q9Y3E7 222 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 NPHP1O15259 732 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 LMAN1P49257 510 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 ICA1Q05084 483 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 SFSWAPQ12872 951 aaKnown RBP5.49□□□□□ -1.53
HDDC2-208ENST00000609021 NAA25Q14CX7 972 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 C1orf131Q8NDD1 294 aaKnown RBP5.49□□□□□ -1.53
HDDC2-208ENST00000609021 STAG1Q8WVM7 1258 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 ZNHIT6Q9NWK9 470 aaKnown RBP5.49□□□□□ -1.53
HDDC2-208ENST00000609021 CAMSAP1Q5T5Y3 1602 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 ATP10AO60312 1499 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 PLA2R1Q13018 1463 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 EIF3CLB5ME19 914 aaKnown RBP5.49□□□□□ -1.53
HDDC2-208ENST00000609021 FOSL1P15407 271 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 SLC7A5Q01650 507 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 RNF20Q5VTR2 975 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 MYSM1Q5VVJ2 828 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 SKAP1Q86WV1 359 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 GAS2L2Q8NHY3 880 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 DYDC1Q8WWB3 177 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 PLEKHG4BQ96PX9 1271 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 EIF3CQ99613 913 aaKnown RBP5.49□□□□□ -1.53
HDDC2-208ENST00000609021 ACBD3Q9H3P7 528 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 ODF2LQ9ULJ1 636 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 ASXL2Q76L83 1435 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 IQGAP1P46940 1657 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 ZNF189O75820 626 aaPredicted RBP5.48□□□□□ -1.53
HDDC2-208ENST00000609021 FAAH2Q6GMR7 532 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 UBE2Q1Q7Z7E8 422 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 HOOK3Q86VS8 718 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 MYOCDQ8IZQ8 938 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 ZNF483Q8TF39 744 aaPredicted RBP5.48□□□□□ -1.53
HDDC2-208ENST00000609021 FAXDC2Q96IV6 333 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 BAG1Q99933 345 aaPredicted RBP5.48□□□□□ -1.53
HDDC2-208ENST00000609021 GABBR1Q9UBS5 961 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 LCMT1Q9UIC8 334 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 TRAK1Q9UPV9 953 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 TPPPO94811 219 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 PYGLP06737 847 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 FAM160A1Q05DH4 1040 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 LAMB3Q13751 1172 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 TBC1D25Q3MII6 688 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 PMFBP1Q8TBY8 1022 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 ANKRD24Q8TF21 1146 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 CTNNBL1Q8WYA6 563 aaPredicted RBP5.48□□□□□ -1.53
HDDC2-208ENST00000609021 ZBTB10Q96DT7 871 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 MTRQ99707 1265 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.48□□□□□ -1.53
HDDC2-208ENST00000609021 CFAP65Q6ZU64 1925 aaKnown RBP5.48□□□□□ -1.53
HDDC2-208ENST00000609021 KIAA1210Q9ULL0 1709 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 CLTCL1P53675 1640 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 SNX1Q13596 522 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 KBTBD12Q3ZCT8 623 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 CLEC4GQ6UXB4 293 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 STAG2Q8N3U4 1231 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 TCHPQ9BT92 498 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 MMTAG2Q9BU76 263 aaKnown RBP5.48□□□□□ -1.53
HDDC2-208ENST00000609021 TSPYL2Q9H2G4 693 aaPredicted RBP5.48□□□□□ -1.53
HDDC2-208ENST00000609021 IKBKGQ9Y6K9 419 aa5.48□□□□□ -1.53
HDDC2-208ENST00000609021 SPAG9O60271 1321 aaKnown RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 KTN1Q86UP2 1357 aaKnown RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 KDM5AP29375 1690 aaKnown RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 VDRP11473 427 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 STIP1P31948 543 aaKnown RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 TBC1D8BQ0IIM8 1120 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 ZNF662Q6ZS27 426 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 SMG6Q86US8 1419 aaKnown RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 GTF3C6Q969F1 213 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 ZMAT2Q96NC0 199 aaKnown RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 AGAP3Q96P47 875 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 RETREG1Q9H6L5 497 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 KIF9Q9HAQ2 790 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 ZNF446Q9NWS9 450 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 COG6Q9Y2V7 657 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 ATP7AQ04656 1500 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 RAB3GAP2Q9H2M9 1393 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 SYNMO15061 1565 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 A0A087WUV0 522 aaPredicted RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 ERC2O15083 957 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 TIMM44O43615 452 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 C21orf2O43822 256 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 ERLIN2O94905 339 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 BDNFP23560 247 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 NCBP1Q09161 790 aaKnown RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 FKBP5Q13451 457 aaPredicted RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 KIF4BQ2VIQ3 1234 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 GIGYF2Q6Y7W6 1299 aaKnown RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 SPATA21Q7Z572 469 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 PARP9Q8IXQ6 854 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 OSCARQ8IYS5 282 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 B4GALNT2Q8NHY0 566 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 CHMP7Q8WUX9 453 aaPredicted RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 WDR70Q9NW82 654 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 FAM163BP0C2L3 166 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 MYCLP1P12525 358 aaPredicted RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 TRPC1P48995 793 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 CCNHP51946 323 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms