RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 RPGRQ92834 1020 aaKnown RBP11.1□□□□□ -0.63
ITGB5-212ENST00000608657 CHMP3Q9Y3E7 222 aa11.1□□□□□ -0.63
ITGB5-212ENST00000608657 LRRFIP2Q9Y608 721 aaKnown RBP11.1□□□□□ -0.63
ITGB5-212ENST00000608657 BRCA1P38398 1863 aaKnown RBP11.1□□□□□ -0.63
ITGB5-212ENST00000608657 H0YIN7 160 aa11.09□□□□□ -0.63
ITGB5-212ENST00000608657 TGFB2P61812 414 aa11.09□□□□□ -0.63
ITGB5-212ENST00000608657 CCDC152Q4G0S7 254 aa11.09□□□□□ -0.63
ITGB5-212ENST00000608657 B4GALNT3Q6L9W6 998 aa11.09□□□□□ -0.63
ITGB5-212ENST00000608657 C3orf67Q6ZVT6 689 aa11.09□□□□□ -0.63
ITGB5-212ENST00000608657 CCDC85AQ96PX6 553 aaPredicted RBP11.09□□□□□ -0.63
ITGB5-212ENST00000608657 FHDC1Q9C0D6 1143 aaPredicted RBP11.09□□□□□ -0.63
ITGB5-212ENST00000608657 BICC1Q9H694 974 aaKnown RBP11.09□□□□□ -0.63
ITGB5-212ENST00000608657 C1orf115Q9H7X2 142 aa11.09□□□□□ -0.63
ITGB5-212ENST00000608657 TAF1P21675 1872 aa11.08□□□□□ -0.64
ITGB5-212ENST00000608657 KLRG2A4D1S0 409 aaPredicted RBP11.08□□□□□ -0.64
ITGB5-212ENST00000608657 CHRNA5P30532 468 aa11.08□□□□□ -0.64
ITGB5-212ENST00000608657 FOXO4P98177 505 aa11.08□□□□□ -0.64
ITGB5-212ENST00000608657 SF3B3Q15393 1217 aaKnown RBP11.08□□□□□ -0.64
ITGB5-212ENST00000608657 CRY2Q49AN0 593 aa11.08□□□□□ -0.64
ITGB5-212ENST00000608657 EPHA10Q5JZY3 1008 aa11.08□□□□□ -0.64
ITGB5-212ENST00000608657 LMBR1LQ6UX01 489 aa11.08□□□□□ -0.64
ITGB5-212ENST00000608657 DDX46Q7L014 1031 aaKnown RBP11.08□□□□□ -0.64
ITGB5-212ENST00000608657 TTLL11Q8NHH1 800 aa11.08□□□□□ -0.64
ITGB5-212ENST00000608657 RBM17Q96I25 401 aaKnown RBP11.08□□□□□ -0.64
ITGB5-212ENST00000608657 KAZALD1Q96I82 304 aa11.08□□□□□ -0.64
ITGB5-212ENST00000608657 RTL9Q8NET4 1388 aa11.07□□□□□ -0.64
ITGB5-212ENST00000608657 SRGNP10124 158 aa11.07□□□□□ -0.64
ITGB5-212ENST00000608657 NPR1P16066 1061 aa11.07□□□□□ -0.64
ITGB5-212ENST00000608657 DPEP1P16444 411 aa11.07□□□□□ -0.64
ITGB5-212ENST00000608657 FAM161AQ3B820 660 aa11.07□□□□□ -0.64
ITGB5-212ENST00000608657 RABL6Q3YEC7 729 aaPredicted RBP11.07□□□□□ -0.64
ITGB5-212ENST00000608657 ANKRD44Q8N8A2 993 aa11.07□□□□□ -0.64
ITGB5-212ENST00000608657 NLGN2Q8NFZ4 835 aa11.07□□□□□ -0.64
ITGB5-212ENST00000608657 ZNF622Q969S3 477 aaKnown RBP eCLIP11.07□□□□□ -0.64
ITGB5-212ENST00000608657 MASTLQ96GX5 879 aa11.07□□□□□ -0.64
ITGB5-212ENST00000608657 ZBTB40Q9NUA8 1239 aa11.07□□□□□ -0.64
ITGB5-212ENST00000608657 A0A0G2JLW4 131 aa11.06□□□□□ -0.64
ITGB5-212ENST00000608657 ANKRD18BA2A2Z9 1011 aa11.06□□□□□ -0.64
ITGB5-212ENST00000608657 CSF1RP07333 972 aa11.06□□□□□ -0.64
ITGB5-212ENST00000608657 ALDH1B1P30837 517 aa11.06□□□□□ -0.64
ITGB5-212ENST00000608657 AAMPQ13685 434 aa11.06□□□□□ -0.64
ITGB5-212ENST00000608657 STYK1Q6J9G0 422 aa11.06□□□□□ -0.64
ITGB5-212ENST00000608657 EXOC6Q8TAG9 804 aa11.06□□□□□ -0.64
ITGB5-212ENST00000608657 SYT17Q9BSW7 474 aa11.06□□□□□ -0.64
ITGB5-212ENST00000608657 ANP32EQ9BTT0 268 aa11.06□□□□□ -0.64
ITGB5-212ENST00000608657 GREM2Q9H772 168 aa11.06□□□□□ -0.64
ITGB5-212ENST00000608657 ARFGEF1Q9Y6D6 1849 aa11.05□□□□□ -0.64
ITGB5-212ENST00000608657 LRRC37AA6NMS7 1700 aa11.05□□□□□ -0.64
ITGB5-212ENST00000608657 ITGA6P23229 1130 aa11.05□□□□□ -0.64
ITGB5-212ENST00000608657 HOXA10P31260 410 aaPredicted RBP11.05□□□□□ -0.64
ITGB5-212ENST00000608657 ANP32AP39687 249 aaKnown RBP11.05□□□□□ -0.64
ITGB5-212ENST00000608657 IFIT5Q13325 482 aaKnown RBP11.05□□□□□ -0.64
ITGB5-212ENST00000608657 GRAPQ13588 217 aa11.05□□□□□ -0.64
ITGB5-212ENST00000608657 CCDC57Q2TAC2 916 aa11.05□□□□□ -0.64
ITGB5-212ENST00000608657 TAF7LQ5H9L4 462 aa11.05□□□□□ -0.64
ITGB5-212ENST00000608657 GRAPLQ8TC17 118 aaPredicted RBP11.05□□□□□ -0.64
ITGB5-212ENST00000608657 CNKSR1Q969H4 720 aa11.05□□□□□ -0.64
ITGB5-212ENST00000608657 CRAMP1Q96RY5 1269 aa11.05□□□□□ -0.64
ITGB5-212ENST00000608657 CDC5LQ99459 802 aaKnown RBP11.05□□□□□ -0.64
ITGB5-212ENST00000608657 SEC31BQ9NQW1 1179 aa11.05□□□□□ -0.64
ITGB5-212ENST00000608657 PIM2Q9P1W9 311 aa11.05□□□□□ -0.64
ITGB5-212ENST00000608657 SLX4Q8IY92 1834 aa11.05□□□□□ -0.64
ITGB5-212ENST00000608657 COL4A1P02462 1669 aa11.04□□□□□ -0.64
ITGB5-212ENST00000608657 SRGAP3O43295 1099 aa11.04□□□□□ -0.64
ITGB5-212ENST00000608657 IGHMBP2P38935 993 aaKnown RBP11.04□□□□□ -0.64
ITGB5-212ENST00000608657 MTX1Q13505 466 aa11.04□□□□□ -0.64
ITGB5-212ENST00000608657 CEP85Q6P2H3 762 aa11.04□□□□□ -0.64
ITGB5-212ENST00000608657 ANKRD18AQ8IVF6 992 aa11.04□□□□□ -0.64
ITGB5-212ENST00000608657 TTLL6Q8N841 843 aa11.04□□□□□ -0.64
ITGB5-212ENST00000608657 WWC3Q9ULE0 1092 aa11.04□□□□□ -0.64
ITGB5-212ENST00000608657 A0A1B0GUL6 1792 aa11.03□□□□□ -0.64
ITGB5-212ENST00000608657 PPEF1O14829 653 aaPredicted RBP11.03□□□□□ -0.64
ITGB5-212ENST00000608657 KCNA3P22001 575 aa11.03□□□□□ -0.64
ITGB5-212ENST00000608657 ATP8B2P98198 1209 aa11.03□□□□□ -0.64
ITGB5-212ENST00000608657 DALRD3Q5D0E6 543 aaKnown RBP11.03□□□□□ -0.64
ITGB5-212ENST00000608657 PRPF40BQ6NWY9 871 aaKnown RBP11.03□□□□□ -0.64
ITGB5-212ENST00000608657 RPAP2Q8IXW5 612 aaPredicted RBP11.03□□□□□ -0.64
ITGB5-212ENST00000608657 CELF1Q92879 486 aaKnown RBP11.03□□□□□ -0.64
ITGB5-212ENST00000608657 PNMA6EA0A0J9YXQ4 647 aa11.02□□□□□ -0.65
ITGB5-212ENST00000608657 HMMRO75330 724 aa11.02□□□□□ -0.65
ITGB5-212ENST00000608657 BBOX1O75936 387 aa11.02□□□□□ -0.65
ITGB5-212ENST00000608657 RPS8P62241 208 aaKnown RBP11.02□□□□□ -0.65
ITGB5-212ENST00000608657 TMC4Q7Z404 712 aa11.02□□□□□ -0.65
ITGB5-212ENST00000608657 ZNF594Q96JF6 807 aaPredicted RBP11.02□□□□□ -0.65
ITGB5-212ENST00000608657 MPHOSPH8Q99549 860 aa11.02□□□□□ -0.65
ITGB5-212ENST00000608657 TMX4Q9H1E5 349 aaPredicted RBP11.02□□□□□ -0.65
ITGB5-212ENST00000608657 BCS1LQ9Y276 419 aa11.02□□□□□ -0.65
ITGB5-212ENST00000608657 RFX5P48382 616 aaPredicted RBP11.01□□□□□ -0.65
ITGB5-212ENST00000608657 KLHDC4Q8TBB5 520 aa11.01□□□□□ -0.65
ITGB5-212ENST00000608657 SSH3Q8TE77 659 aa11.01□□□□□ -0.65
ITGB5-212ENST00000608657 CNNM1Q9NRU3 951 aa11.01□□□□□ -0.65
ITGB5-212ENST00000608657 ZNF219Q9P2Y4 722 aaPredicted RBP11.01□□□□□ -0.65
ITGB5-212ENST00000608657 PTPN12Q05209 780 aaKnown RBP11□□□□□ -0.65
ITGB5-212ENST00000608657 POLA2Q14181 598 aa11□□□□□ -0.65
ITGB5-212ENST00000608657 LDHAL6AQ6ZMR3 332 aa11□□□□□ -0.65
ITGB5-212ENST00000608657 SIL1Q9H173 461 aa11□□□□□ -0.65
ITGB5-212ENST00000608657 COPRSQ9NQ92 184 aa11□□□□□ -0.65
ITGB5-212ENST00000608657 BSDC1Q9NW68 430 aaPredicted RBP11□□□□□ -0.65
ITGB5-212ENST00000608657 PA2G4Q9UQ80 394 aaKnown RBP11□□□□□ -0.65
ITGB5-212ENST00000608657 EYA2O00167 538 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms