RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 LTV1Q96GA3 475 aaPredicted RBP14.74□□□□□ -0.05
MSH6-212ENST00000607272 CLIP2Q9UDT6 1046 aa14.74□□□□□ -0.05
MSH6-212ENST00000607272 AMOTL2Q9Y2J4 779 aa14.74□□□□□ -0.05
MSH6-212ENST00000607272 PIK3C2AO00443 1686 aa14.74□□□□□ -0.05
MSH6-212ENST00000607272 CCDC112Q8NEF3 446 aa14.74□□□□□ -0.05
MSH6-212ENST00000607272 NRBP1Q9UHY1 535 aa14.74□□□□□ -0.05
MSH6-212ENST00000607272 UBR1Q8IWV7 1749 aa14.74□□□□□ -0.05
MSH6-212ENST00000607272 NEMFO60524 1076 aa14.73□□□□□ -0.05
MSH6-212ENST00000607272 NR1I2O75469 434 aa14.73□□□□□ -0.05
MSH6-212ENST00000607272 TOB2Q14106 344 aaPredicted RBP14.73□□□□□ -0.05
MSH6-212ENST00000607272 BICD2Q8TD16 824 aa14.73□□□□□ -0.05
MSH6-212ENST00000607272 CGNQ9P2M7 1197 aaKnown RBP14.73□□□□□ -0.05
MSH6-212ENST00000607272 PA2G4Q9UQ80 394 aaKnown RBP14.73□□□□□ -0.05
MSH6-212ENST00000607272 G3BP1Q13283 466 aaKnown RBP eCLIP14.73□□□□□ -0.05
MSH6-212ENST00000607272 KRT32Q14532 448 aa14.72□□□□□ -0.05
MSH6-212ENST00000607272 TPD52L1Q16890 204 aaPredicted RBP14.72□□□□□ -0.05
MSH6-212ENST00000607272 KSR2Q6VAB6 950 aa14.72□□□□□ -0.05
MSH6-212ENST00000607272 SLC26A8Q96RN1 970 aa14.72□□□□□ -0.05
MSH6-212ENST00000607272 ZSCAN16Q9H4T2 348 aaPredicted RBP14.72□□□□□ -0.05
MSH6-212ENST00000607272 CFAP45Q9UL16 551 aa14.72□□□□□ -0.05
MSH6-212ENST00000607272 MAP3K2Q9Y2U5 619 aa14.72□□□□□ -0.05
MSH6-212ENST00000607272 TEFQ10587 303 aa14.72□□□□□ -0.05
MSH6-212ENST00000607272 SARM1Q6SZW1 724 aa14.72□□□□□ -0.05
MSH6-212ENST00000607272 PGBD1Q96JS3 809 aa14.72□□□□□ -0.05
MSH6-212ENST00000607272 FSD1Q9BTV5 496 aa14.72□□□□□ -0.05
MSH6-212ENST00000607272 DNAJC25Q9H1X3 360 aa14.72□□□□□ -0.05
MSH6-212ENST00000607272 LGR6Q9HBX8 967 aa14.72□□□□□ -0.05
MSH6-212ENST00000607272 CTNNA3Q9UI47 895 aa14.72□□□□□ -0.05
MSH6-212ENST00000607272 NPHP4O75161 1426 aaPredicted RBP14.71□□□□□ -0.05
MSH6-212ENST00000607272 A0A0D9SFI3 127 aa14.71□□□□□ -0.05
MSH6-212ENST00000607272 BTBD11A6QL63 1104 aa14.71□□□□□ -0.05
MSH6-212ENST00000607272 GOLGA6L19H0YKK7 550 aa14.71□□□□□ -0.05
MSH6-212ENST00000607272 MED1Q15648 1581 aaPredicted RBP14.71□□□□□ -0.05
MSH6-212ENST00000607272 ABTB2Q8N961 1025 aa14.71□□□□□ -0.05
MSH6-212ENST00000607272 CACTINQ8WUQ7 758 aaKnown RBP14.71□□□□□ -0.05
MSH6-212ENST00000607272 EAF2Q96CJ1 260 aaPredicted RBP14.71□□□□□ -0.05
MSH6-212ENST00000607272 EID1Q9Y6B2 187 aa14.71□□□□□ -0.05
MSH6-212ENST00000607272 MED23Q9ULK4 1368 aa14.71□□□□□ -0.05
MSH6-212ENST00000607272 CTAGE5O15320 804 aa14.7□□□□□ -0.06
MSH6-212ENST00000607272 SASH1O94885 1247 aa14.7□□□□□ -0.06
MSH6-212ENST00000607272 ANXA1P04083 346 aa14.7□□□□□ -0.06
MSH6-212ENST00000607272 USHBP1Q8N6Y0 703 aa14.7□□□□□ -0.06
MSH6-212ENST00000607272 MRFAP1L1Q96HT8 127 aa14.7□□□□□ -0.06
MSH6-212ENST00000607272 TCEANC2Q96MN5 208 aa14.7□□□□□ -0.06
MSH6-212ENST00000607272 NUTM2GQ5VZR2 741 aa14.7□□□□□ -0.06
MSH6-212ENST00000607272 CEP135Q66GS9 1140 aa14.7□□□□□ -0.06
MSH6-212ENST00000607272 GTF3C6Q969F1 213 aa14.7□□□□□ -0.06
MSH6-212ENST00000607272 JCADQ9P266 1359 aa14.7□□□□□ -0.06
MSH6-212ENST00000607272 KCNQ3O43525 872 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 RBM6P78332 1123 aaKnown RBP14.69□□□□□ -0.06
MSH6-212ENST00000607272 RESTQ13127 1097 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 STK3Q13188 491 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 COL9A3Q14050 684 aaPredicted RBP14.69□□□□□ -0.06
MSH6-212ENST00000607272 USPL1Q5W0Q7 1092 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 LRRC8AQ8IWT6 810 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 LINS1Q8NG48 757 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 CCDC8Q9H0W5 538 aaPredicted RBP14.69□□□□□ -0.06
MSH6-212ENST00000607272 TBX22Q9Y458 520 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 DIP2AQ14689 1571 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 UTYO14607 1347 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 ANKARQ7Z5J8 1434 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 H3BQV1 296 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 GRM8O00222 908 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 IQCB1Q15051 598 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 AKAP4Q5JQC9 854 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 IFFO2Q5TF58 517 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 BOLA2Q9H3K6 86 aa14.69□□□□□ -0.06
MSH6-212ENST00000607272 DDX41Q9UJV9 622 aaKnown RBP14.69□□□□□ -0.06
MSH6-212ENST00000607272 TAF5LO75529 589 aa14.68□□□□□ -0.06
MSH6-212ENST00000607272 GABPB1Q06547 395 aaPredicted RBP14.68□□□□□ -0.06
MSH6-212ENST00000607272 CCDC144BQ3MJ40 725 aa14.68□□□□□ -0.06
MSH6-212ENST00000607272 CYB5RLQ6IPT4 315 aa14.68□□□□□ -0.06
MSH6-212ENST00000607272 CCDC144CPQ8IYA2 1237 aa14.68□□□□□ -0.06
MSH6-212ENST00000607272 IP6K1Q92551 441 aa14.68□□□□□ -0.06
MSH6-212ENST00000607272 STX1AQ16623 288 aa14.68□□□□□ -0.06
MSH6-212ENST00000607272 CWF19L2Q2TBE0 894 aaKnown RBP14.68□□□□□ -0.06
MSH6-212ENST00000607272 BRF1Q92994 677 aa14.68□□□□□ -0.06
MSH6-212ENST00000607272 KDM3BQ7LBC6 1761 aa14.67□□□□□ -0.06
MSH6-212ENST00000607272 SUCLG2Q96I99 432 aa14.67□□□□□ -0.06
MSH6-212ENST00000607272 NEK1Q96PY6 1258 aa14.67□□□□□ -0.06
MSH6-212ENST00000607272 BICC1Q9H694 974 aaKnown RBP14.67□□□□□ -0.06
MSH6-212ENST00000607272 TAF6LQ9Y6J9 622 aa14.67□□□□□ -0.06
MSH6-212ENST00000607272 TSPOAP1O95153 1857 aa14.67□□□□□ -0.06
MSH6-212ENST00000607272 DDX58O95786 925 aaKnown RBP14.66□□□□□ -0.06
MSH6-212ENST00000607272 PTPN14Q15678 1187 aa14.66□□□□□ -0.06
MSH6-212ENST00000607272 NBPF6Q5VWK0 638 aa14.66□□□□□ -0.06
MSH6-212ENST00000607272 ZNF589Q86UQ0 364 aaPredicted RBP14.66□□□□□ -0.06
MSH6-212ENST00000607272 NBPF4Q96M43 638 aa14.66□□□□□ -0.06
MSH6-212ENST00000607272 LLPHQ9BRT6 129 aaKnown RBP14.66□□□□□ -0.06
MSH6-212ENST00000607272 MORC2Q9Y6X9 1032 aaPredicted RBP14.66□□□□□ -0.06
MSH6-212ENST00000607272 SLIT1O75093 1534 aa14.66□□□□□ -0.06
MSH6-212ENST00000607272 JAK2O60674 1132 aa14.66□□□□□ -0.06
MSH6-212ENST00000607272 PLEKHO1Q53GL0 409 aaPredicted RBP14.66□□□□□ -0.06
MSH6-212ENST00000607272 TAF3Q5VWG9 929 aa14.66□□□□□ -0.06
MSH6-212ENST00000607272 ATL3Q6DD88 541 aa14.66□□□□□ -0.06
MSH6-212ENST00000607272 KAZALD1Q96I82 304 aa14.66□□□□□ -0.06
MSH6-212ENST00000607272 TLR7Q9NYK1 1049 aaKnown RBP14.66□□□□□ -0.06
MSH6-212ENST00000607272 USP54Q70EL1 1684 aa14.66□□□□□ -0.06
MSH6-212ENST00000607272 BECN2A8MW95 431 aa14.65□□□□□ -0.06
MSH6-212ENST00000607272 SKILP12757 684 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms