RNA–Protein interactions for RNA: ENST00000606671.5

ZEB1-225, Transcript of zinc finger E-box binding homeobox 1, human

TSL 4

Gene ZEB1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-225	ENST00000606671	ALKBH8	Q96BT7	664 aa	Known RBP	7.03	□□□□□ -1.28
ZEB1-225	ENST00000606671	ZNF775	Q96BV0	537 aa	Predicted RBP	7.03	□□□□□ -1.28
ZEB1-225	ENST00000606671	NIF3L1	Q9GZT8	377 aa		7.03	□□□□□ -1.28
ZEB1-225	ENST00000606671	MBIP	Q9NS73	344 aa		7.03	□□□□□ -1.28
ZEB1-225	ENST00000606671	FOXD3	Q9UJU5	478 aa	Predicted RBP	7.03	□□□□□ -1.28
ZEB1-225	ENST00000606671	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	7.03	□□□□□ -1.28
ZEB1-225	ENST00000606671	MMP20	O60882	483 aa		7.02	□□□□□ -1.29
ZEB1-225	ENST00000606671	TNFRSF21	O75509	655 aa		7.02	□□□□□ -1.29
ZEB1-225	ENST00000606671	RARA	P10276	462 aa		7.02	□□□□□ -1.29
ZEB1-225	ENST00000606671	FMR1	Q06787	632 aa	Known RBP eCLIP	7.02	□□□□□ -1.29
ZEB1-225	ENST00000606671	ORC1	Q13415	861 aa		7.02	□□□□□ -1.29
ZEB1-225	ENST00000606671	PNMA5	Q96PV4	448 aa		7.02	□□□□□ -1.29
ZEB1-225	ENST00000606671	PRR12	Q9ULL5	1215 aa		7.02	□□□□□ -1.29
ZEB1-225	ENST00000606671	IGF1R	P08069	1367 aa		7.01	□□□□□ -1.29
ZEB1-225	ENST00000606671	P4HB	P07237	508 aa	Known RBP	7.01	□□□□□ -1.29
ZEB1-225	ENST00000606671	ERCC3	P19447	782 aa		7.01	□□□□□ -1.29
ZEB1-225	ENST00000606671	PCBP4	P57723	403 aa	Known RBP	7.01	□□□□□ -1.29
ZEB1-225	ENST00000606671	ZNF468	Q5VIY5	522 aa	Predicted RBP	7.01	□□□□□ -1.29
ZEB1-225	ENST00000606671	SYT9	Q86SS6	491 aa		7.01	□□□□□ -1.29
ZEB1-225	ENST00000606671	CNTNAP3B	Q96NU0	1288 aa		7.01	□□□□□ -1.29
ZEB1-225	ENST00000606671	CNTNAP3	Q9BZ76	1288 aa		7.01	□□□□□ -1.29
ZEB1-225	ENST00000606671	CHRD	Q9H2X0	955 aa		7.01	□□□□□ -1.29
ZEB1-225	ENST00000606671	ABI2	Q9NYB9	513 aa	Predicted RBP	7.01	□□□□□ -1.29
ZEB1-225	ENST00000606671	CNTN3	Q9P232	1028 aa		7.01	□□□□□ -1.29
ZEB1-225	ENST00000606671	WFS1	O76024	890 aa		7	□□□□□ -1.29
ZEB1-225	ENST00000606671	CYP2E1	P05181	493 aa	Predicted RBP	7	□□□□□ -1.29
ZEB1-225	ENST00000606671	GMPR	P36959	345 aa		7	□□□□□ -1.29
ZEB1-225	ENST00000606671	C1orf127	Q8N9H9	656 aa		7	□□□□□ -1.29
ZEB1-225	ENST00000606671	SNX29	Q8TEQ0	813 aa		7	□□□□□ -1.29
ZEB1-225	ENST00000606671	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7	□□□□□ -1.29
ZEB1-225	ENST00000606671	EFCC1	Q9HA90	598 aa		7	□□□□□ -1.29
ZEB1-225	ENST00000606671	KLF15	Q9UIH9	416 aa		7	□□□□□ -1.29
ZEB1-225	ENST00000606671	MAP3K6	O95382	1288 aa		6.99	□□□□□ -1.29
ZEB1-225	ENST00000606671	MAPK8	P45983	427 aa		6.99	□□□□□ -1.29
ZEB1-225	ENST00000606671	MAP2K3	P46734	347 aa		6.99	□□□□□ -1.29
ZEB1-225	ENST00000606671	PLCB3	Q01970	1234 aa		6.99	□□□□□ -1.29
ZEB1-225	ENST00000606671	NEUROD1	Q13562	356 aa		6.99	□□□□□ -1.29
ZEB1-225	ENST00000606671	TTC39B	Q5VTQ0	682 aa	Predicted RBP	6.99	□□□□□ -1.29
ZEB1-225	ENST00000606671	TLR7	Q9NYK1	1049 aa	Known RBP	6.99	□□□□□ -1.29
ZEB1-225	ENST00000606671	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	6.99	□□□□□ -1.29
ZEB1-225	ENST00000606671	EIF1AY	O14602	144 aa	Known RBP	6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	PHACTR2	O75167	634 aa		6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	ARAF	P10398	606 aa		6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	SRSF11	Q05519	484 aa	Known RBP	6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	LCE2A	Q5TA79	106 aa	Predicted RBP	6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	USPL1	Q5W0Q7	1092 aa		6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	DHX32	Q7L7V1	743 aa	Known RBP	6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	FBXO33	Q7Z6M2	555 aa		6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	OR13H1	Q8NG92	308 aa		6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	CSRNP1	Q96S65	589 aa		6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	SETDB2	Q96T68	719 aa		6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	ZFYVE28	Q9HCC9	887 aa		6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	AVEN	Q9NQS1	362 aa	Predicted RBP	6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	KANSL3	Q9P2N6	904 aa		6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	NSFL1C	Q9UNZ2	370 aa	Known RBP	6.98	□□□□□ -1.29
ZEB1-225	ENST00000606671	PNMA6F	A0A0J9YX94	578 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	NEURL1B	A8MQ27	555 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	ZBTB42	B2RXF5	422 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	EREG	O14944	169 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	SIN3B	O75182	1162 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	ADAMTS2	O95450	1211 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	ADH6	P28332	368 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	TAGLN	Q01995	201 aa	Known RBP	6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	COL19A1	Q14993	1142 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	ENOX2	Q16206	610 aa	Known RBP	6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	EAPP	Q56P03	285 aa	Predicted RBP	6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	TREML4	Q6UXN2	200 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	FCHSD1	Q86WN1	690 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	IGFLR1	Q9H665	355 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	GGA1	Q9UJY5	639 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	WWC3	Q9ULE0	1092 aa		6.97	□□□□□ -1.29
ZEB1-225	ENST00000606671	CPNE3	O75131	537 aa	Known RBP	6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	POLR3D	P05423	398 aa	Predicted RBP	6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	PSAP	P07602	524 aa		6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	CES1	P23141	567 aa		6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	SOX18	P35713	384 aa		6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	TBC1D8B	Q0IIM8	1120 aa		6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	COL13A1	Q5TAT6	717 aa	Predicted RBP	6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	TRPM4	Q8TD43	1214 aa		6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	TNFRSF25	Q93038	417 aa		6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	ACD	Q96AP0	544 aa		6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	NSUN5	Q96P11	429 aa	Known RBP	6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	MDFI	Q99750	246 aa		6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	BCL2L13	Q9BXK5	485 aa		6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	OXCT2	Q9BYC2	517 aa	Predicted RBP	6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	UBE2O	Q9C0C9	1292 aa	Known RBP	6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	DNAJC25	Q9H1X3	360 aa		6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	DNAJB12	Q9NXW2	375 aa	Known RBP	6.96	□□□□□ -1.3
ZEB1-225	ENST00000606671	NEFL	P07196	543 aa		6.95	□□□□□ -1.3
ZEB1-225	ENST00000606671	HOXD8	P13378	290 aa	Predicted RBP	6.95	□□□□□ -1.3
ZEB1-225	ENST00000606671	GPLD1	P80108	840 aa		6.95	□□□□□ -1.3
ZEB1-225	ENST00000606671	MLLT1	Q03111	559 aa	Predicted RBP	6.95	□□□□□ -1.3
ZEB1-225	ENST00000606671	PLAUR	Q03405	335 aa		6.95	□□□□□ -1.3
ZEB1-225	ENST00000606671	C1orf229	Q6ZS94	237 aa	Predicted RBP	6.95	□□□□□ -1.3
ZEB1-225	ENST00000606671	AMOTL2	Q9Y2J4	779 aa		6.95	□□□□□ -1.3
ZEB1-225	ENST00000606671	PHF20L1	A8MW92	1017 aa		6.94	□□□□□ -1.3
ZEB1-225	ENST00000606671	LDHB	P07195	334 aa	Known RBP	6.94	□□□□□ -1.3
ZEB1-225	ENST00000606671	SLURP2	P0DP57	97 aa		6.94	□□□□□ -1.3
ZEB1-225	ENST00000606671	NRL	P54845	237 aa		6.94	□□□□□ -1.3
ZEB1-225	ENST00000606671	SLCO4C1	Q6ZQN7	724 aa		6.94	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms