RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 ERFEQ4G0M1 354 aa16.73■□□□□ 0.27
HLA-F-230ENST00000606273 USPL1Q5W0Q7 1092 aa16.73■□□□□ 0.27
HLA-F-230ENST00000606273 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
HLA-F-230ENST00000606273 TMEM88BA6NKF7 163 aa16.72■□□□□ 0.27
HLA-F-230ENST00000606273 ZPR1O75312 459 aa16.72■□□□□ 0.27
HLA-F-230ENST00000606273 DDNO94850 711 aaPredicted RBP16.72■□□□□ 0.27
HLA-F-230ENST00000606273 NFIXQ14938 502 aa16.72■□□□□ 0.27
HLA-F-230ENST00000606273 C2CD5Q86YS7 1000 aa16.72■□□□□ 0.27
HLA-F-230ENST00000606273 NECTIN2Q92692 538 aa16.72■□□□□ 0.27
HLA-F-230ENST00000606273 H0YIN7 160 aa16.71■□□□□ 0.27
HLA-F-230ENST00000606273 HSP90AB1P08238 724 aaKnown RBP16.71■□□□□ 0.27
HLA-F-230ENST00000606273 EIF4G2P78344 907 aaKnown RBP eCLIP16.71■□□□□ 0.27
HLA-F-230ENST00000606273 ZNF516Q92618 1163 aa16.71■□□□□ 0.27
HLA-F-230ENST00000606273 ADGRG1Q9Y653 693 aa16.71■□□□□ 0.27
HLA-F-230ENST00000606273 SERPINB2P05120 415 aa16.7■□□□□ 0.26
HLA-F-230ENST00000606273 SLC4A3P48751 1232 aa16.7■□□□□ 0.26
HLA-F-230ENST00000606273 LDHDQ86WU2 507 aa16.69■□□□□ 0.26
HLA-F-230ENST00000606273 COL5A3P25940 1745 aaPredicted RBP16.69■□□□□ 0.26
HLA-F-230ENST00000606273 C21orf2O43822 256 aa16.68■□□□□ 0.26
HLA-F-230ENST00000606273 DNAJB2P25686 324 aa16.68■□□□□ 0.26
HLA-F-230ENST00000606273 MAP2K1Q02750 393 aaPredicted RBP16.68■□□□□ 0.26
HLA-F-230ENST00000606273 DEFB115Q30KQ5 88 aa16.68■□□□□ 0.26
HLA-F-230ENST00000606273 NFATC2IPQ8NCF5 419 aa16.68■□□□□ 0.26
HLA-F-230ENST00000606273 MYH14Q7Z406 1995 aaKnown RBP16.68■□□□□ 0.26
HLA-F-230ENST00000606273 RASSF10A6NK89 507 aa16.67■□□□□ 0.26
HLA-F-230ENST00000606273 CARD14Q9BXL6 1004 aa16.67■□□□□ 0.26
HLA-F-230ENST00000606273 NARFQ9UHQ1 456 aa16.67■□□□□ 0.26
HLA-F-230ENST00000606273 IQCA1LA6NCM1 817 aa16.66■□□□□ 0.26
HLA-F-230ENST00000606273 PLEKHO1Q53GL0 409 aaPredicted RBP16.66■□□□□ 0.26
HLA-F-230ENST00000606273 TAF1DQ9H5J8 278 aaPredicted RBP16.66■□□□□ 0.26
HLA-F-230ENST00000606273 TESPA1A2RU30 521 aaPredicted RBP16.65■□□□□ 0.26
HLA-F-230ENST00000606273 MTHFSP49914 203 aa16.65■□□□□ 0.26
HLA-F-230ENST00000606273 EIF4A2Q14240 407 aaKnown RBP16.65■□□□□ 0.26
HLA-F-230ENST00000606273 POLKQ9UBT6 870 aa16.65■□□□□ 0.26
HLA-F-230ENST00000606273 SOS1Q07889 1333 aaPredicted RBP16.65■□□□□ 0.26
HLA-F-230ENST00000606273 WDR33Q9C0J8 1336 aaKnown RBP16.65■□□□□ 0.26
HLA-F-230ENST00000606273 COPS2P61201 443 aa16.64■□□□□ 0.25
HLA-F-230ENST00000606273 DNAJC10Q8IXB1 793 aa16.64■□□□□ 0.25
HLA-F-230ENST00000606273 ZNF622Q969S3 477 aaKnown RBP eCLIP16.64■□□□□ 0.25
HLA-F-230ENST00000606273 TIAM2Q8IVF5 1701 aa16.63■□□□□ 0.25
HLA-F-230ENST00000606273 TAOK3Q9H2K8 898 aa16.63■□□□□ 0.25
HLA-F-230ENST00000606273 TMEM134Q9H6X4 195 aa16.63■□□□□ 0.25
HLA-F-230ENST00000606273 LTBP3Q9NS15 1303 aa16.63■□□□□ 0.25
HLA-F-230ENST00000606273 RCCD1A6NED2 376 aa16.62■□□□□ 0.25
HLA-F-230ENST00000606273 AMOTQ4VCS5 1084 aa16.62■□□□□ 0.25
HLA-F-230ENST00000606273 RBM26Q5T8P6 1007 aaKnown RBP16.62■□□□□ 0.25
HLA-F-230ENST00000606273 ZNF530Q6P9A1 599 aaPredicted RBP16.62■□□□□ 0.25
HLA-F-230ENST00000606273 CARMIL3Q8ND23 1372 aa16.62■□□□□ 0.25
HLA-F-230ENST00000606273 CYP19A1P11511 503 aaPredicted RBP16.61■□□□□ 0.25
HLA-F-230ENST00000606273 EAPPQ56P03 285 aaPredicted RBP16.61■□□□□ 0.25
HLA-F-230ENST00000606273 PPP1R18Q6NYC8 613 aa16.61■□□□□ 0.25
HLA-F-230ENST00000606273 NKX2-3Q8TAU0 364 aa16.61■□□□□ 0.25
HLA-F-230ENST00000606273 BRIP1Q9BX63 1249 aa16.61■□□□□ 0.25
HLA-F-230ENST00000606273 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
HLA-F-230ENST00000606273 ADAMTS7Q9UKP4 1686 aa16.6■□□□□ 0.25
HLA-F-230ENST00000606273 CNTROBQ8N137 903 aa16.6■□□□□ 0.25
HLA-F-230ENST00000606273 PDE6BP35913 854 aa16.59■□□□□ 0.25
HLA-F-230ENST00000606273 BICDL1Q6ZP65 573 aa16.59■□□□□ 0.25
HLA-F-230ENST00000606273 MAP1SQ66K74 1059 aaPredicted RBP16.58■□□□□ 0.24
HLA-F-230ENST00000606273 SMYD5Q6GMV2 418 aa16.58■□□□□ 0.24
HLA-F-230ENST00000606273 PRR14Q9BWN1 585 aa16.58■□□□□ 0.24
HLA-F-230ENST00000606273 NRXN2Q9P2S2 1712 aa16.58■□□□□ 0.24
HLA-F-230ENST00000606273 VIRMAQ69YN4 1812 aaKnown RBP16.58■□□□□ 0.24
HLA-F-230ENST00000606273 COL15A1P39059 1388 aa16.57■□□□□ 0.24
HLA-F-230ENST00000606273 C1orf141Q5JVX7 400 aa16.57■□□□□ 0.24
HLA-F-230ENST00000606273 BEGAINQ9BUH8 593 aa16.57■□□□□ 0.24
HLA-F-230ENST00000606273 HACL1Q9UJ83 578 aa16.57■□□□□ 0.24
HLA-F-230ENST00000606273 ABT1Q9ULW3 272 aaKnown RBP16.57■□□□□ 0.24
HLA-F-230ENST00000606273 ZBTB1Q9Y2K1 713 aa16.57■□□□□ 0.24
HLA-F-230ENST00000606273 CCDC88AQ3V6T2 1871 aa16.56■□□□□ 0.24
HLA-F-230ENST00000606273 EPHX2P34913 555 aa16.56■□□□□ 0.24
HLA-F-230ENST00000606273 HIC1Q14526 733 aa16.56■□□□□ 0.24
HLA-F-230ENST00000606273 PNMA8AQ86V59 439 aaPredicted RBP16.56■□□□□ 0.24
HLA-F-230ENST00000606273 CCDC24Q8N4L8 307 aa16.56■□□□□ 0.24
HLA-F-230ENST00000606273 GPR101Q96P66 508 aaPredicted RBP16.56■□□□□ 0.24
HLA-F-230ENST00000606273 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
HLA-F-230ENST00000606273 PCDHB3Q9Y5E6 796 aa16.56■□□□□ 0.24
HLA-F-230ENST00000606273 PRR5LQ6MZQ0 368 aa16.55■□□□□ 0.24
HLA-F-230ENST00000606273 CNKSR1Q969H4 720 aa16.55■□□□□ 0.24
HLA-F-230ENST00000606273 CAPNS2Q96L46 248 aa16.55■□□□□ 0.24
HLA-F-230ENST00000606273 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.55■□□□□ 0.24
HLA-F-230ENST00000606273 DLEC1Q9Y238 1755 aa16.55■□□□□ 0.24
HLA-F-230ENST00000606273 AFDNP55196 1824 aaKnown RBP16.54■□□□□ 0.24
HLA-F-230ENST00000606273 TJP1Q07157 1748 aa16.54■□□□□ 0.24
HLA-F-230ENST00000606273 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
HLA-F-230ENST00000606273 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
HLA-F-230ENST00000606273 CDCA8Q53HL2 280 aa16.54■□□□□ 0.24
HLA-F-230ENST00000606273 SOGA3Q5TF21 947 aa16.54■□□□□ 0.24
HLA-F-230ENST00000606273 TBC1D9BQ66K14 1250 aa16.54■□□□□ 0.24
HLA-F-230ENST00000606273 MCOLN1Q9GZU1 580 aa16.54■□□□□ 0.24
HLA-F-230ENST00000606273 DDX21Q9NR30 783 aaKnown RBP eCLIP16.54■□□□□ 0.24
HLA-F-230ENST00000606273 CANXP27824 592 aaKnown RBP16.53■□□□□ 0.24
HLA-F-230ENST00000606273 ECE1P42892 770 aa16.53■□□□□ 0.24
HLA-F-230ENST00000606273 STYK1Q6J9G0 422 aa16.53■□□□□ 0.24
HLA-F-230ENST00000606273 PRPF40BQ6NWY9 871 aaKnown RBP16.53■□□□□ 0.24
HLA-F-230ENST00000606273 PXYLP1Q8TE99 480 aa16.53■□□□□ 0.24
HLA-F-230ENST00000606273 C7orf43Q8WVR3 580 aa16.53■□□□□ 0.24
HLA-F-230ENST00000606273 PRKD2Q9BZL6 878 aa16.53■□□□□ 0.24
HLA-F-230ENST00000606273 KIF20BQ96Q89 1820 aa16.52■□□□□ 0.24
HLA-F-230ENST00000606273 ZNF541Q9H0D2 1346 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms