RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 PCNTO95613 3336 aa18.01■□□□□ 0.47
CTSA-211ENST00000606066 GRM8O00222 908 aa18.01■□□□□ 0.47
CTSA-211ENST00000606066 SF3B3Q15393 1217 aaKnown RBP18.01■□□□□ 0.47
CTSA-211ENST00000606066 C3orf67Q6ZVT6 689 aa18.01■□□□□ 0.47
CTSA-211ENST00000606066 JARID2Q92833 1246 aaPredicted RBP18.01■□□□□ 0.47
CTSA-211ENST00000606066 CRAMP1Q96RY5 1269 aa18.01■□□□□ 0.47
CTSA-211ENST00000606066 TRIM27P14373 513 aa18■□□□□ 0.47
CTSA-211ENST00000606066 DDX46Q7L014 1031 aaKnown RBP18■□□□□ 0.47
CTSA-211ENST00000606066 LMNB1P20700 586 aa17.99■□□□□ 0.47
CTSA-211ENST00000606066 CCDC152Q4G0S7 254 aa17.99■□□□□ 0.47
CTSA-211ENST00000606066 PRPF40BQ6NWY9 871 aaKnown RBP17.99■□□□□ 0.47
CTSA-211ENST00000606066 SMC1BQ8NDV3 1235 aa17.99■□□□□ 0.47
CTSA-211ENST00000606066 PLA2G12BQ9BX93 195 aa17.99■□□□□ 0.47
CTSA-211ENST00000606066 ANKRD31Q8N7Z5 1873 aa17.99■□□□□ 0.47
CTSA-211ENST00000606066 GLTPD2A6NH11 291 aa17.98■□□□□ 0.47
CTSA-211ENST00000606066 MS4A1P11836 297 aa17.98■□□□□ 0.47
CTSA-211ENST00000606066 CASP7P55210 303 aa17.98■□□□□ 0.47
CTSA-211ENST00000606066 SOGA3Q5TF21 947 aa17.98■□□□□ 0.47
CTSA-211ENST00000606066 TMX4Q9H1E5 349 aaPredicted RBP17.98■□□□□ 0.47
CTSA-211ENST00000606066 N4BP2Q86UW6 1770 aaPredicted RBP17.98■□□□□ 0.47
CTSA-211ENST00000606066 ABCC4O15439 1325 aa17.98■□□□□ 0.47
CTSA-211ENST00000606066 BBOX1O75936 387 aa17.97■□□□□ 0.47
CTSA-211ENST00000606066 VEGFAP15692 232 aaPredicted RBP17.97■□□□□ 0.47
CTSA-211ENST00000606066 CTSWP56202 376 aa17.97■□□□□ 0.47
CTSA-211ENST00000606066 HTRA3P83110 453 aa17.97■□□□□ 0.47
CTSA-211ENST00000606066 INTS3Q68E01 1043 aaKnown RBP17.97■□□□□ 0.47
CTSA-211ENST00000606066 FTSJ3Q8IY81 847 aaKnown RBP17.97■□□□□ 0.47
CTSA-211ENST00000606066 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.97■□□□□ 0.47
CTSA-211ENST00000606066 HDAC5Q9UQL6 1122 aa17.97■□□□□ 0.47
CTSA-211ENST00000606066 UTYO14607 1347 aa17.97■□□□□ 0.47
CTSA-211ENST00000606066 GRAPQ13588 217 aa17.96■□□□□ 0.47
CTSA-211ENST00000606066 GRAPLQ8TC17 118 aaPredicted RBP17.96■□□□□ 0.47
CTSA-211ENST00000606066 CLUAP1Q96AJ1 413 aa17.96■□□□□ 0.47
CTSA-211ENST00000606066 TNRC6CQ9HCJ0 1690 aaKnown RBP17.96■□□□□ 0.47
CTSA-211ENST00000606066 C21orf2O43822 256 aa17.95■□□□□ 0.46
CTSA-211ENST00000606066 NBPF7P0C2Y1 421 aaPredicted RBP17.95■□□□□ 0.46
CTSA-211ENST00000606066 PRELPP51888 382 aa17.95■□□□□ 0.46
CTSA-211ENST00000606066 CC2D2BQ6DHV5 1058 aa17.95■□□□□ 0.46
CTSA-211ENST00000606066 TMC4Q7Z404 712 aa17.95■□□□□ 0.46
CTSA-211ENST00000606066 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
CTSA-211ENST00000606066 TTLL11Q8NHH1 800 aa17.95■□□□□ 0.46
CTSA-211ENST00000606066 USP44Q9H0E7 712 aa17.95■□□□□ 0.46
CTSA-211ENST00000606066 PPEF1O14829 653 aaPredicted RBP17.94■□□□□ 0.46
CTSA-211ENST00000606066 RASSF7Q02833 373 aa17.94■□□□□ 0.46
CTSA-211ENST00000606066 GRIPAP1Q4V328 841 aa17.94■□□□□ 0.46
CTSA-211ENST00000606066 ZNF219Q9P2Y4 722 aaPredicted RBP17.94■□□□□ 0.46
CTSA-211ENST00000606066 COL11A2P13942 1736 aaPredicted RBP17.93■□□□□ 0.46
CTSA-211ENST00000606066 CSF1RP07333 972 aa17.93■□□□□ 0.46
CTSA-211ENST00000606066 CCDC93Q567U6 631 aa17.93■□□□□ 0.46
CTSA-211ENST00000606066 C7orf43Q8WVR3 580 aa17.93■□□□□ 0.46
CTSA-211ENST00000606066 CCDC85AQ96PX6 553 aaPredicted RBP17.93■□□□□ 0.46
CTSA-211ENST00000606066 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
CTSA-211ENST00000606066 DLEC1Q9Y238 1755 aa17.93■□□□□ 0.46
CTSA-211ENST00000606066 NFKBIEO00221 500 aa17.92■□□□□ 0.46
CTSA-211ENST00000606066 GNAI3P08754 354 aa17.92■□□□□ 0.46
CTSA-211ENST00000606066 UBTFL1P0CB47 393 aaPredicted RBP17.92■□□□□ 0.46
CTSA-211ENST00000606066 RPS8P62241 208 aaKnown RBP17.92■□□□□ 0.46
CTSA-211ENST00000606066 FOXO4P98177 505 aa17.92■□□□□ 0.46
CTSA-211ENST00000606066 COL13A1Q5TAT6 717 aaPredicted RBP17.92■□□□□ 0.46
CTSA-211ENST00000606066 RTKN2Q8IZC4 609 aa17.92■□□□□ 0.46
CTSA-211ENST00000606066 TMEM57Q8N5G2 664 aa17.92■□□□□ 0.46
CTSA-211ENST00000606066 ATP6V0A2Q9Y487 856 aa17.92■□□□□ 0.46
CTSA-211ENST00000606066 RTL9Q8NET4 1388 aa17.91■□□□□ 0.46
CTSA-211ENST00000606066 DPY19L2Q6NUT2 758 aa17.91■□□□□ 0.46
CTSA-211ENST00000606066 ANKRD18AQ8IVF6 992 aa17.91■□□□□ 0.46
CTSA-211ENST00000606066 SP8Q8IXZ3 490 aa17.91■□□□□ 0.46
CTSA-211ENST00000606066 CELF1Q92879 486 aaKnown RBP17.91■□□□□ 0.46
CTSA-211ENST00000606066 SUCLG2Q96I99 432 aa17.91■□□□□ 0.46
CTSA-211ENST00000606066 GREM2Q9H772 168 aa17.91■□□□□ 0.46
CTSA-211ENST00000606066 TNNQ9UQP3 1299 aa17.91■□□□□ 0.46
CTSA-211ENST00000606066 DDX60Q8IY21 1712 aaKnown RBP17.9■□□□□ 0.46
CTSA-211ENST00000606066 POTECB2RU33 542 aa17.9■□□□□ 0.46
CTSA-211ENST00000606066 IFIT5Q13325 482 aaKnown RBP17.9■□□□□ 0.46
CTSA-211ENST00000606066 LMBR1LQ6UX01 489 aa17.9■□□□□ 0.46
CTSA-211ENST00000606066 SEC31BQ9NQW1 1179 aa17.9■□□□□ 0.46
CTSA-211ENST00000606066 CHMP3Q9Y3E7 222 aa17.9■□□□□ 0.46
CTSA-211ENST00000606066 BRCA1P38398 1863 aaKnown RBP17.9■□□□□ 0.46
CTSA-211ENST00000606066 ANKRD18BA2A2Z9 1011 aa17.89■□□□□ 0.45
CTSA-211ENST00000606066 ITGA6P23229 1130 aa17.89■□□□□ 0.45
CTSA-211ENST00000606066 IGHMBP2P38935 993 aaKnown RBP17.89■□□□□ 0.45
CTSA-211ENST00000606066 CCDC57Q2TAC2 916 aa17.89■□□□□ 0.45
CTSA-211ENST00000606066 FAM161AQ3B820 660 aa17.89■□□□□ 0.45
CTSA-211ENST00000606066 ITPRIPQ8IWB1 547 aa17.89■□□□□ 0.45
CTSA-211ENST00000606066 LAMB2P55268 1798 aa17.89■□□□□ 0.45
CTSA-211ENST00000606066 RABL6Q3YEC7 729 aaPredicted RBP17.88■□□□□ 0.45
CTSA-211ENST00000606066 EPHA10Q5JZY3 1008 aa17.88■□□□□ 0.45
CTSA-211ENST00000606066 KAZALD1Q96I82 304 aa17.88■□□□□ 0.45
CTSA-211ENST00000606066 MEIS3Q99687 375 aa17.88■□□□□ 0.45
CTSA-211ENST00000606066 TAOK3Q9H2K8 898 aa17.88■□□□□ 0.45
CTSA-211ENST00000606066 BICC1Q9H694 974 aaKnown RBP17.88■□□□□ 0.45
CTSA-211ENST00000606066 ARFGEF1Q9Y6D6 1849 aa17.88■□□□□ 0.45
CTSA-211ENST00000606066 PLIN1O60240 522 aa17.87■□□□□ 0.45
CTSA-211ENST00000606066 RLBP1P12271 317 aa17.87■□□□□ 0.45
CTSA-211ENST00000606066 PDE3AQ14432 1141 aa17.87■□□□□ 0.45
CTSA-211ENST00000606066 TAF7LQ5H9L4 462 aa17.87■□□□□ 0.45
CTSA-211ENST00000606066 MPHOSPH8Q99549 860 aa17.87■□□□□ 0.45
CTSA-211ENST00000606066 LTBP3Q9NS15 1303 aa17.87■□□□□ 0.45
CTSA-211ENST00000606066 FKBP4Q02790 459 aaKnown RBP eCLIP17.86■□□□□ 0.45
CTSA-211ENST00000606066 OLFM4Q6UX06 510 aa17.86■□□□□ 0.45
CTSA-211ENST00000606066 PANK1Q8TE04 598 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms