RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	DMRTC2	Q8IXT2	367 aa	Predicted RBP	8.16	□□□□□ -1.1
LAMA4-222	ENST00000604740	IFT43	Q96FT9	208 aa		8.16	□□□□□ -1.1
LAMA4-222	ENST00000604740	LRFN2	Q9ULH4	789 aa		8.16	□□□□□ -1.1
LAMA4-222	ENST00000604740	USP20	Q9Y2K6	914 aa		8.16	□□□□□ -1.1
LAMA4-222	ENST00000604740	SELP	P16109	830 aa		8.15	□□□□□ -1.1
LAMA4-222	ENST00000604740	FKBP5	Q13451	457 aa	Predicted RBP	8.15	□□□□□ -1.1
LAMA4-222	ENST00000604740	NKAPL	Q5M9Q1	402 aa		8.15	□□□□□ -1.1
LAMA4-222	ENST00000604740	SHISA2	Q6UWI4	295 aa		8.15	□□□□□ -1.1
LAMA4-222	ENST00000604740	PRIMPOL	Q96LW4	560 aa		8.15	□□□□□ -1.1
LAMA4-222	ENST00000604740	LPIN3	Q9BQK8	851 aa		8.15	□□□□□ -1.1
LAMA4-222	ENST00000604740	PRMT3	O60678	531 aa		8.14	□□□□□ -1.11
LAMA4-222	ENST00000604740	MBTPS1	Q14703	1052 aa		8.14	□□□□□ -1.11
LAMA4-222	ENST00000604740	PERM1	Q5SV97	790 aa		8.14	□□□□□ -1.11
LAMA4-222	ENST00000604740	ELMSAN1	Q6PJG2	1045 aa		8.14	□□□□□ -1.11
LAMA4-222	ENST00000604740	TREML1	Q86YW5	311 aa		8.14	□□□□□ -1.11
LAMA4-222	ENST00000604740	RGL4	Q8IZJ4	473 aa		8.14	□□□□□ -1.11
LAMA4-222	ENST00000604740	FMR1NB	Q8N0W7	255 aa	Predicted RBP	8.14	□□□□□ -1.11
LAMA4-222	ENST00000604740	RTCB	Q9Y3I0	505 aa	Known RBP	8.14	□□□□□ -1.11
LAMA4-222	ENST00000604740	ACIN1	Q9UKV3	1341 aa	Known RBP	8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	ZBTB42	B2RXF5	422 aa		8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	DYRK3	O43781	588 aa		8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	ARID4A	P29374	1257 aa	Predicted RBP	8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	GPLD1	P80108	840 aa		8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	ADGRE1	Q14246	886 aa		8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	SWI5	Q1ZZU3	235 aa		8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	ZMYM1	Q5SVZ6	1142 aa		8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	MSL1	Q68DK7	614 aa		8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	CMTR1	Q8N1G2	835 aa	Known RBP	8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	TRPM4	Q8TD43	1214 aa		8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	C11orf16	Q9NQ32	467 aa		8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	FRRS1L	Q9P0K9	344 aa		8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	USP21	Q9UK80	565 aa		8.13	□□□□□ -1.11
LAMA4-222	ENST00000604740	OPLAH	O14841	1288 aa		8.12	□□□□□ -1.11
LAMA4-222	ENST00000604740	NRG1	Q02297	640 aa	Predicted RBP	8.12	□□□□□ -1.11
LAMA4-222	ENST00000604740	COX20	Q5RI15	118 aa		8.12	□□□□□ -1.11
LAMA4-222	ENST00000604740	HFE2	Q6ZVN8	426 aa		8.12	□□□□□ -1.11
LAMA4-222	ENST00000604740	TXNRD3	Q86VQ6	643 aa		8.12	□□□□□ -1.11
LAMA4-222	ENST00000604740	LENG1	Q96BZ8	264 aa	Predicted RBP	8.12	□□□□□ -1.11
LAMA4-222	ENST00000604740	ZMIZ1	Q9ULJ6	1067 aa		8.12	□□□□□ -1.11
LAMA4-222	ENST00000604740	XYLB	O75191	536 aa		8.11	□□□□□ -1.11
LAMA4-222	ENST00000604740	EIF2AK2	P19525	551 aa	Known RBP	8.11	□□□□□ -1.11
LAMA4-222	ENST00000604740	PLAUR	Q03405	335 aa		8.11	□□□□□ -1.11
LAMA4-222	ENST00000604740	GRIK5	Q16478	980 aa		8.11	□□□□□ -1.11
LAMA4-222	ENST00000604740	WFDC8	Q8IUA0	241 aa		8.11	□□□□□ -1.11
LAMA4-222	ENST00000604740	STK32A	Q8WU08	396 aa		8.11	□□□□□ -1.11
LAMA4-222	ENST00000604740	NRL	P54845	237 aa		8.1	□□□□□ -1.11
LAMA4-222	ENST00000604740	SMG9	Q9H0W8	520 aa	Known RBP	8.1	□□□□□ -1.11
LAMA4-222	ENST00000604740	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	8.09	□□□□□ -1.11
LAMA4-222	ENST00000604740	EGFR	P00533	1210 aa		8.09	□□□□□ -1.11
LAMA4-222	ENST00000604740	ELOA	Q14241	798 aa	Known RBP	8.09	□□□□□ -1.11
LAMA4-222	ENST00000604740	OCLN	Q16625	522 aa		8.09	□□□□□ -1.11
LAMA4-222	ENST00000604740	DTWD1	Q8N5C7	304 aa		8.09	□□□□□ -1.11
LAMA4-222	ENST00000604740	MKNK1	Q9BUB5	465 aa		8.09	□□□□□ -1.11
LAMA4-222	ENST00000604740	SAP130	Q9H0E3	1048 aa		8.09	□□□□□ -1.11
LAMA4-222	ENST00000604740	TLR7	Q9NYK1	1049 aa	Known RBP	8.09	□□□□□ -1.11
LAMA4-222	ENST00000604740	SCO2	A0A1W2PP80	73 aa		8.08	□□□□□ -1.12
LAMA4-222	ENST00000604740	PSAP	P07602	524 aa		8.08	□□□□□ -1.12
LAMA4-222	ENST00000604740	C16orf46	Q6P387	395 aa		8.08	□□□□□ -1.12
LAMA4-222	ENST00000604740	ILDR2	Q71H61	639 aa		8.08	□□□□□ -1.12
LAMA4-222	ENST00000604740	ETFBKMT	Q8IXQ9	262 aa		8.08	□□□□□ -1.12
LAMA4-222	ENST00000604740	NSUN5	Q96P11	429 aa	Known RBP	8.08	□□□□□ -1.12
LAMA4-222	ENST00000604740	KCNMB2	Q9Y691	235 aa		8.08	□□□□□ -1.12
LAMA4-222	ENST00000604740	BRD2	P25440	801 aa	Known RBP	8.07	□□□□□ -1.12
LAMA4-222	ENST00000604740	FAM69C	Q0P6D2	419 aa		8.07	□□□□□ -1.12
LAMA4-222	ENST00000604740	PRSS36	Q5K4E3	855 aa		8.07	□□□□□ -1.12
LAMA4-222	ENST00000604740	FBXO11	Q86XK2	927 aa		8.07	□□□□□ -1.12
LAMA4-222	ENST00000604740	TTC9	Q92623	222 aa		8.07	□□□□□ -1.12
LAMA4-222	ENST00000604740	TP53INP1	Q96A56	240 aa		8.07	□□□□□ -1.12
LAMA4-222	ENST00000604740		J3QW42	95 aa		8.06	□□□□□ -1.12
LAMA4-222	ENST00000604740	MMP20	O60882	483 aa		8.06	□□□□□ -1.12
LAMA4-222	ENST00000604740	GHRH	P01286	108 aa		8.06	□□□□□ -1.12
LAMA4-222	ENST00000604740	PLD4	Q96BZ4	506 aa		8.06	□□□□□ -1.12
LAMA4-222	ENST00000604740	CXXC1	Q9P0U4	656 aa	Predicted RBP	8.06	□□□□□ -1.12
LAMA4-222	ENST00000604740	LOC102724428	A0A0B4J2F2	783 aa		8.05	□□□□□ -1.12
LAMA4-222	ENST00000604740	H2AFB1	P0C5Y9	115 aa		8.05	□□□□□ -1.12
LAMA4-222	ENST00000604740	H2AFB2	P0C5Z0	115 aa		8.05	□□□□□ -1.12
LAMA4-222	ENST00000604740	SIK1	P57059	783 aa		8.05	□□□□□ -1.12
LAMA4-222	ENST00000604740	TRIP4	Q15650	581 aa	Predicted RBP	8.05	□□□□□ -1.12
LAMA4-222	ENST00000604740	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	8.05	□□□□□ -1.12
LAMA4-222	ENST00000604740	GDF6	Q6KF10	455 aa	Predicted RBP	8.05	□□□□□ -1.12
LAMA4-222	ENST00000604740	FOXD4L3	Q6VB84	417 aa	Predicted RBP	8.05	□□□□□ -1.12
LAMA4-222	ENST00000604740	COL26A1	Q96A83	441 aa		8.05	□□□□□ -1.12
LAMA4-222	ENST00000604740	NAA30	Q147X3	362 aa	Predicted RBP	8.04	□□□□□ -1.12
LAMA4-222	ENST00000604740	TMEM164	Q5U3C3	297 aa		8.04	□□□□□ -1.12
LAMA4-222	ENST00000604740	CAPN12	Q6ZSI9	719 aa		8.04	□□□□□ -1.12
LAMA4-222	ENST00000604740	RBSN	Q9H1K0	784 aa		8.04	□□□□□ -1.12
LAMA4-222	ENST00000604740	PTCD1	O75127	700 aa	Known RBP	8.03	□□□□□ -1.12
LAMA4-222	ENST00000604740	DEAF1	O75398	565 aa	Predicted RBP	8.03	□□□□□ -1.12
LAMA4-222	ENST00000604740	ATG7	O95352	703 aa		8.03	□□□□□ -1.12
LAMA4-222	ENST00000604740	SOX18	P35713	384 aa		8.03	□□□□□ -1.12
LAMA4-222	ENST00000604740	IREB2	P48200	963 aa	Known RBP	8.03	□□□□□ -1.12
LAMA4-222	ENST00000604740	SRPK2	P78362	688 aa	Known RBP	8.03	□□□□□ -1.12
LAMA4-222	ENST00000604740	FAM26D	Q5JW98	314 aa		8.03	□□□□□ -1.12
LAMA4-222	ENST00000604740	NLRP13	Q86W25	1043 aa		8.03	□□□□□ -1.12
LAMA4-222	ENST00000604740	WFDC12	Q8WWY7	111 aa		8.03	□□□□□ -1.12
LAMA4-222	ENST00000604740	UBAP1L	F5GYI3	381 aa		8.02	□□□□□ -1.13
LAMA4-222	ENST00000604740	TNFRSF10B	O14763	440 aa		8.02	□□□□□ -1.13
LAMA4-222	ENST00000604740	IGF2-AS	Q6U949	168 aa		8.02	□□□□□ -1.13
LAMA4-222	ENST00000604740	PIK3R5	Q8WYR1	880 aa		8.02	□□□□□ -1.13
LAMA4-222	ENST00000604740	SSBP4	Q9BWG4	385 aa	Predicted RBP	8.02	□□□□□ -1.13

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