RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 MRFAP1L1Q96HT8 127 aa17.98■□□□□ 0.47
LYSMD4-211ENST00000604213 NEMFO60524 1076 aa17.98■□□□□ 0.47
LYSMD4-211ENST00000604213 LTKP29376 864 aa17.98■□□□□ 0.47
LYSMD4-211ENST00000604213 C11orf57Q6ZUT1 292 aaPredicted RBP17.98■□□□□ 0.47
LYSMD4-211ENST00000604213 NYAP1Q6ZVC0 841 aa17.98■□□□□ 0.47
LYSMD4-211ENST00000604213 UBR1Q8IWV7 1749 aa17.98■□□□□ 0.47
LYSMD4-211ENST00000604213 ZNF592Q92610 1267 aa17.98■□□□□ 0.47
LYSMD4-211ENST00000604213 CCDC8Q9H0W5 538 aaPredicted RBP17.98■□□□□ 0.47
LYSMD4-211ENST00000604213 HMG20BQ9P0W2 317 aa17.98■□□□□ 0.47
LYSMD4-211ENST00000604213 MAP3K2Q9Y2U5 619 aa17.98■□□□□ 0.47
LYSMD4-211ENST00000604213 NUTM2GQ5VZR2 741 aa17.97■□□□□ 0.47
LYSMD4-211ENST00000604213 ZNF771Q7L3S4 317 aaPredicted RBP17.97■□□□□ 0.47
LYSMD4-211ENST00000604213 BRF1Q92994 677 aa17.97■□□□□ 0.47
LYSMD4-211ENST00000604213 GTF3C6Q969F1 213 aa17.97■□□□□ 0.47
LYSMD4-211ENST00000604213 FSD1Q9BTV5 496 aa17.97■□□□□ 0.47
LYSMD4-211ENST00000604213 TLR7Q9NYK1 1049 aaKnown RBP17.97■□□□□ 0.47
LYSMD4-211ENST00000604213 GOLGA6L19H0YKK7 550 aa17.97■□□□□ 0.47
LYSMD4-211ENST00000604213 FAM69CQ0P6D2 419 aa17.97■□□□□ 0.47
LYSMD4-211ENST00000604213 ZNF589Q86UQ0 364 aaPredicted RBP17.97■□□□□ 0.47
LYSMD4-211ENST00000604213 KDM3BQ7LBC6 1761 aa17.97■□□□□ 0.47
LYSMD4-211ENST00000604213 SLFN14P0C7P3 912 aa17.96■□□□□ 0.47
LYSMD4-211ENST00000604213 BOLA2Q9H3K6 86 aa17.96■□□□□ 0.47
LYSMD4-211ENST00000604213 ESF1Q9H501 851 aaKnown RBP17.96■□□□□ 0.47
LYSMD4-211ENST00000604213 DDX11Q96FC9 970 aa17.96■□□□□ 0.47
LYSMD4-211ENST00000604213 DBF4Q9UBU7 674 aaPredicted RBP17.96■□□□□ 0.47
LYSMD4-211ENST00000604213 TAF5LO75529 589 aa17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 SKILP12757 684 aa17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 CWF19L2Q2TBE0 894 aaKnown RBP17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 ZNF397Q8NF99 534 aaPredicted RBP17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 KAZALD1Q96I82 304 aa17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 SLC26A8Q96RN1 970 aa17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 ZSCAN16Q9H4T2 348 aaPredicted RBP17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 CFAP45Q9UL16 551 aa17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 ZNF215Q9UL58 517 aaPredicted RBP17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 HDAC5Q9UQL6 1122 aa17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 MARF1Q9Y4F3 1742 aaKnown RBP17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 RGPD8O14715 1765 aaPredicted RBP17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 G3BP1Q13283 466 aaKnown RBP eCLIP17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 PTPN14Q15678 1187 aa17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 STX1AQ16623 288 aa17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 KMT5BQ4FZB7 885 aa17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 USPL1Q5W0Q7 1092 aa17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 KSR2Q6VAB6 950 aa17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 SUCLG2Q96I99 432 aa17.95■□□□□ 0.46
LYSMD4-211ENST00000604213 ADD1P35611 737 aaKnown RBP17.94■□□□□ 0.46
LYSMD4-211ENST00000604213 CCZ1BP86790 482 aa17.94■□□□□ 0.46
LYSMD4-211ENST00000604213 CCZ1P86791 482 aaPredicted RBP17.94■□□□□ 0.46
LYSMD4-211ENST00000604213 PROSER3Q2NL68 480 aa17.94■□□□□ 0.46
LYSMD4-211ENST00000604213 AMOTL2Q9Y2J4 779 aa17.94■□□□□ 0.46
LYSMD4-211ENST00000604213 CTAGE5O15320 804 aa17.94■□□□□ 0.46
LYSMD4-211ENST00000604213 FAM53CQ9NYF3 392 aa17.94■□□□□ 0.46
LYSMD4-211ENST00000604213 DIP2AQ14689 1571 aa17.94■□□□□ 0.46
LYSMD4-211ENST00000604213 CCDC69A6NI79 296 aa17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 H3BQV1 296 aa17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 KRT32Q14532 448 aa17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 IFFO2Q5TF58 517 aa17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 TAF3Q5VWG9 929 aa17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 USP16Q9Y5T5 823 aa17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 BTBD11A6QL63 1104 aa17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 DHX40Q8IX18 779 aaKnown RBP17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 BCL11BQ9C0K0 894 aaPredicted RBP17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 GOLPH3LQ9H4A5 285 aa17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 BICC1Q9H694 974 aaKnown RBP17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 KCND1Q9NSA2 647 aa17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 RCOR1Q9UKL0 485 aa17.93■□□□□ 0.46
LYSMD4-211ENST00000604213 UTYO14607 1347 aa17.92■□□□□ 0.46
LYSMD4-211ENST00000604213 CCAR1Q8IX12 1150 aaKnown RBP17.92■□□□□ 0.46
LYSMD4-211ENST00000604213 CCAR2Q8N163 923 aaKnown RBP17.92■□□□□ 0.46
LYSMD4-211ENST00000604213 KRT222Q8N1A0 295 aa17.92■□□□□ 0.46
LYSMD4-211ENST00000604213 NEK1Q96PY6 1258 aa17.92■□□□□ 0.46
LYSMD4-211ENST00000604213 COL15A1P39059 1388 aa17.92■□□□□ 0.46
LYSMD4-211ENST00000604213 GRM8O00222 908 aa17.91■□□□□ 0.46
LYSMD4-211ENST00000604213 Q6ZUG5 572 aa17.91■□□□□ 0.46
LYSMD4-211ENST00000604213 ERO1AQ96HE7 468 aa17.91■□□□□ 0.46
LYSMD4-211ENST00000604213 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.91■□□□□ 0.46
LYSMD4-211ENST00000604213 V9GYY5 206 aaPredicted RBP17.91■□□□□ 0.46
LYSMD4-211ENST00000604213 ERBB3P21860 1342 aa17.91■□□□□ 0.46
LYSMD4-211ENST00000604213 CEBPZQ03701 1054 aaKnown RBP17.91■□□□□ 0.46
LYSMD4-211ENST00000604213 TEFQ10587 303 aa17.91■□□□□ 0.46
LYSMD4-211ENST00000604213 SNW1Q13573 536 aaKnown RBP17.91■□□□□ 0.46
LYSMD4-211ENST00000604213 TERF2Q15554 542 aa17.91■□□□□ 0.46
LYSMD4-211ENST00000604213 NBPF6Q5VWK0 638 aa17.9■□□□□ 0.46
LYSMD4-211ENST00000604213 FILIP1Q7Z7B0 1213 aa17.9■□□□□ 0.46
LYSMD4-211ENST00000604213 SMARCC2Q8TAQ2 1214 aa17.9■□□□□ 0.46
LYSMD4-211ENST00000604213 NBPF4Q96M43 638 aa17.9■□□□□ 0.46
LYSMD4-211ENST00000604213 TRMT1Q9NXH9 659 aaKnown RBP17.9■□□□□ 0.46
LYSMD4-211ENST00000604213 BECN2A8MW95 431 aa17.9■□□□□ 0.46
LYSMD4-211ENST00000604213 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
LYSMD4-211ENST00000604213 FBXO38Q6PIJ6 1188 aa17.9■□□□□ 0.46
LYSMD4-211ENST00000604213 ABTB2Q8N961 1025 aa17.9■□□□□ 0.46
LYSMD4-211ENST00000604213 LINS1Q8NG48 757 aa17.9■□□□□ 0.46
LYSMD4-211ENST00000604213 EDC3Q96F86 508 aaKnown RBP17.9■□□□□ 0.46
LYSMD4-211ENST00000604213 TSPOAP1O95153 1857 aa17.89■□□□□ 0.46
LYSMD4-211ENST00000604213 A0A087WWV3 80 aa17.89■□□□□ 0.45
LYSMD4-211ENST00000604213 SCRN1Q12765 414 aa17.89■□□□□ 0.45
LYSMD4-211ENST00000604213 ELF2Q15723 593 aa17.89■□□□□ 0.45
LYSMD4-211ENST00000604213 ENGASEQ8NFI3 743 aa17.89■□□□□ 0.45
LYSMD4-211ENST00000604213 FTOQ9C0B1 505 aaKnown RBP eCLIP17.89■□□□□ 0.45
LYSMD4-211ENST00000604213 SIL1Q9H173 461 aa17.89■□□□□ 0.45
LYSMD4-211ENST00000604213 USP54Q70EL1 1684 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms