RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	KLHL34	Q8N239	644 aa		18.57	■□□□□ 0.56
CELF4-223	ENST00000603232	PALD1	Q9ULE6	856 aa		18.57	■□□□□ 0.56
CELF4-223	ENST00000603232	NCL	P19338	710 aa	Known RBP	18.57	■□□□□ 0.56
CELF4-223	ENST00000603232	ANO2	Q9NQ90	1003 aa		18.57	■□□□□ 0.56
CELF4-223	ENST00000603232	DDX21	Q9NR30	783 aa	Known RBP eCLIP	18.57	■□□□□ 0.56
CELF4-223	ENST00000603232	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	18.57	■□□□□ 0.56
CELF4-223	ENST00000603232	USP42	Q9H9J4	1324 aa	Known RBP	18.56	■□□□□ 0.56
CELF4-223	ENST00000603232	TRIM6-TRIM34	B2RNG4	842 aa		18.56	■□□□□ 0.56
CELF4-223	ENST00000603232	RC3H1	Q5TC82	1133 aa	Known RBP	18.56	■□□□□ 0.56
CELF4-223	ENST00000603232	TMEM63C	Q9P1W3	806 aa		18.56	■□□□□ 0.56
CELF4-223	ENST00000603232	DBF4	Q9UBU7	674 aa	Predicted RBP	18.56	■□□□□ 0.56
CELF4-223	ENST00000603232	AIMP1	Q12904	312 aa	Known RBP	18.55	■□□□□ 0.56
CELF4-223	ENST00000603232	KIAA1211	Q6ZU35	1233 aa		18.55	■□□□□ 0.56
CELF4-223	ENST00000603232	RILPL2	Q969X0	211 aa		18.55	■□□□□ 0.56
CELF4-223	ENST00000603232	NOL7	Q9UMY1	257 aa	Known RBP	18.55	■□□□□ 0.56
CELF4-223	ENST00000603232	COL15A1	P39059	1388 aa		18.55	■□□□□ 0.56
CELF4-223	ENST00000603232	ZNF500	O60304	480 aa	Predicted RBP	18.55	■□□□□ 0.56
CELF4-223	ENST00000603232	TSHZ3	Q63HK5	1081 aa		18.55	■□□□□ 0.56
CELF4-223	ENST00000603232	TTLL7	Q6ZT98	887 aa		18.55	■□□□□ 0.56
CELF4-223	ENST00000603232	TFCP2L1	Q9NZI6	479 aa		18.55	■□□□□ 0.56
CELF4-223	ENST00000603232	RAD50	Q92878	1312 aa		18.54	■□□□□ 0.56
CELF4-223	ENST00000603232	RPS6KA4	O75676	772 aa		18.54	■□□□□ 0.56
CELF4-223	ENST00000603232	MCM5	P33992	734 aa		18.54	■□□□□ 0.56
CELF4-223	ENST00000603232	EIF5	P55010	431 aa	Known RBP	18.54	■□□□□ 0.56
CELF4-223	ENST00000603232	PI4K2B	Q8TCG2	481 aa		18.54	■□□□□ 0.56
CELF4-223	ENST00000603232	XAGE3	Q8WTP9	111 aa		18.54	■□□□□ 0.56
CELF4-223	ENST00000603232	KIF1BP	Q96EK5	621 aa		18.54	■□□□□ 0.56
CELF4-223	ENST00000603232	QSER1	Q2KHR3	1735 aa		18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	MSN	P26038	577 aa	Known RBP	18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	SLC15A2	Q16348	729 aa		18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	HSP90AB4P	Q58FF6	505 aa		18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	RHPN1	Q8TCX5	695 aa		18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	SYAP1	Q96A49	352 aa	Predicted RBP	18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	STK32B	Q9NY57	414 aa		18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	RTCB	Q9Y3I0	505 aa	Known RBP	18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	BCOR	Q6W2J9	1755 aa		18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	ARFGEF2	Q9Y6D5	1785 aa		18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	IL6ST	P40189	918 aa	Predicted RBP	18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	COPS6	Q7L5N1	327 aa		18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	PPP1R42	Q7Z4L9	355 aa		18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	TMEM87A	Q8NBN3	555 aa		18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	TBC1D2B	Q9UPU7	963 aa		18.53	■□□□□ 0.56
CELF4-223	ENST00000603232	WDR33	Q9C0J8	1336 aa	Known RBP	18.52	■□□□□ 0.56
CELF4-223	ENST00000603232	SGSM2	O43147	1006 aa		18.52	■□□□□ 0.56
CELF4-223	ENST00000603232	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.52	■□□□□ 0.56
CELF4-223	ENST00000603232	PDCL3	Q9H2J4	239 aa		18.52	■□□□□ 0.56
CELF4-223	ENST00000603232	PNPLA7	Q6ZV29	1317 aa		18.51	■□□□□ 0.55
CELF4-223	ENST00000603232	MTX1	Q13505	466 aa		18.51	■□□□□ 0.55
CELF4-223	ENST00000603232	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	18.51	■□□□□ 0.55
CELF4-223	ENST00000603232	ARHGEF1	Q92888	912 aa	Known RBP	18.51	■□□□□ 0.55
CELF4-223	ENST00000603232	HYPK	Q9NX55	129 aa		18.51	■□□□□ 0.55
CELF4-223	ENST00000603232	RBM27	Q9P2N5	1060 aa	Known RBP	18.51	■□□□□ 0.55
CELF4-223	ENST00000603232	SRP68	Q9UHB9	627 aa	Known RBP	18.51	■□□□□ 0.55
CELF4-223	ENST00000603232	NUP98	P52948	1817 aa		18.51	■□□□□ 0.55
CELF4-223	ENST00000603232	TTC41P	Q6P2S7	1318 aa		18.51	■□□□□ 0.55
CELF4-223	ENST00000603232	SCN7A	Q01118	1682 aa		18.51	■□□□□ 0.55
CELF4-223	ENST00000603232	SURF6	O75683	361 aa	Known RBP	18.5	■□□□□ 0.55
CELF4-223	ENST00000603232	BEND3	Q5T5X7	828 aa		18.5	■□□□□ 0.55
CELF4-223	ENST00000603232	CNTROB	Q8N137	903 aa		18.5	■□□□□ 0.55
CELF4-223	ENST00000603232	ZBTB3	Q9H5J0	574 aa		18.5	■□□□□ 0.55
CELF4-223	ENST00000603232	TCHH	Q07283	1943 aa		18.5	■□□□□ 0.55
CELF4-223	ENST00000603232	DZIP3	Q86Y13	1208 aa	Known RBP	18.49	■□□□□ 0.55
CELF4-223	ENST00000603232	COL23A1	Q86Y22	540 aa	Predicted RBP	18.49	■□□□□ 0.55
CELF4-223	ENST00000603232	TTC14	Q96N46	770 aa		18.49	■□□□□ 0.55
CELF4-223	ENST00000603232	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.49	■□□□□ 0.55
CELF4-223	ENST00000603232	SYCE3	A1L190	88 aa		18.49	■□□□□ 0.55
CELF4-223	ENST00000603232	PSD	A5PKW4	1024 aa	Predicted RBP	18.49	■□□□□ 0.55
CELF4-223	ENST00000603232	TRAPPC3L	Q5T215	181 aa		18.49	■□□□□ 0.55
CELF4-223	ENST00000603232	DNAAF4	Q8WXU2	420 aa		18.49	■□□□□ 0.55
CELF4-223	ENST00000603232	R3HDM1	Q15032	1099 aa	Known RBP	18.48	■□□□□ 0.55
CELF4-223	ENST00000603232	LSG1	Q9H089	658 aa	Known RBP	18.48	■□□□□ 0.55
CELF4-223	ENST00000603232	IL25	Q9H293	177 aa		18.48	■□□□□ 0.55
CELF4-223	ENST00000603232	IL1RAPL2	Q9NP60	686 aa		18.48	■□□□□ 0.55
CELF4-223	ENST00000603232	ADCY9	O60503	1353 aa		18.47	■□□□□ 0.55
CELF4-223	ENST00000603232	HLF	Q16534	295 aa		18.47	■□□□□ 0.55
CELF4-223	ENST00000603232	HDAC5	Q9UQL6	1122 aa		18.47	■□□□□ 0.55
CELF4-223	ENST00000603232	RPAP1	Q9BWH6	1393 aa	Predicted RBP	18.47	■□□□□ 0.55
CELF4-223	ENST00000603232	SRGAP3	O43295	1099 aa		18.47	■□□□□ 0.55
CELF4-223	ENST00000603232	USPL1	Q5W0Q7	1092 aa		18.47	■□□□□ 0.55
CELF4-223	ENST00000603232	NUTM1	Q86Y26	1132 aa		18.47	■□□□□ 0.55
CELF4-223	ENST00000603232	ZMYND15	Q9H091	742 aa		18.47	■□□□□ 0.55
CELF4-223	ENST00000603232	ZKSCAN5	Q9Y2L8	839 aa		18.47	■□□□□ 0.55
CELF4-223	ENST00000603232	CASZ1	Q86V15	1759 aa		18.46	■□□□□ 0.55
CELF4-223	ENST00000603232	ANKRD36C	Q5JPF3	1778 aa		18.46	■□□□□ 0.55
CELF4-223	ENST00000603232	GLRX3	O76003	335 aa	Known RBP	18.46	■□□□□ 0.55
CELF4-223	ENST00000603232	CAMTA2	O94983	1202 aa		18.46	■□□□□ 0.55
CELF4-223	ENST00000603232	FAM184A	Q8NB25	1140 aa		18.46	■□□□□ 0.55
CELF4-223	ENST00000603232	KCNB2	Q92953	911 aa		18.46	■□□□□ 0.55
CELF4-223	ENST00000603232	UPF3B	Q9BZI7	483 aa	Known RBP	18.46	■□□□□ 0.55
CELF4-223	ENST00000603232	CCDC39	Q9UFE4	941 aa		18.46	■□□□□ 0.55
CELF4-223	ENST00000603232	SNX14	Q9Y5W7	946 aa		18.46	■□□□□ 0.55
CELF4-223	ENST00000603232	PI4KAP2	A4QPH2	592 aa		18.45	■□□□□ 0.54
CELF4-223	ENST00000603232	ALDH1L1	O75891	902 aa		18.45	■□□□□ 0.54
CELF4-223	ENST00000603232	RFC4	P35249	363 aa		18.45	■□□□□ 0.54
CELF4-223	ENST00000603232	KIF6	Q6ZMV9	814 aa		18.45	■□□□□ 0.54
CELF4-223	ENST00000603232	PI4KAP1	Q8N8J0	262 aa		18.45	■□□□□ 0.54
CELF4-223	ENST00000603232	BCL2L12	Q9HB09	334 aa		18.45	■□□□□ 0.54
CELF4-223	ENST00000603232	MAP3K15	Q6ZN16	1313 aa		18.45	■□□□□ 0.54
CELF4-223	ENST00000603232	AFDN	P55196	1824 aa	Known RBP	18.45	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms