RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 CEMIPQ8WUJ3 1361 aa18.18■□□□□ 0.5
PPFIA3-206ENST00000602655 BRPF1P55201 1214 aaPredicted RBP18.18■□□□□ 0.5
PPFIA3-206ENST00000602655 CARD10Q9BWT7 1032 aa18.18■□□□□ 0.5
PPFIA3-206ENST00000602655 PCDH11XQ9BZA7 1347 aa18.18■□□□□ 0.5
PPFIA3-206ENST00000602655 PCDH11YQ9BZA8 1340 aa18.18■□□□□ 0.5
PPFIA3-206ENST00000602655 TOMM22Q9NS69 142 aa18.18■□□□□ 0.5
PPFIA3-206ENST00000602655 MED1Q15648 1581 aaPredicted RBP18.18■□□□□ 0.5
PPFIA3-206ENST00000602655 ATP8B2P98198 1209 aa18.18■□□□□ 0.5
PPFIA3-206ENST00000602655 EPHA10Q5JZY3 1008 aa18.18■□□□□ 0.5
PPFIA3-206ENST00000602655 ZNF594Q96JF6 807 aaPredicted RBP18.18■□□□□ 0.5
PPFIA3-206ENST00000602655 ANO2Q9NQ90 1003 aa18.18■□□□□ 0.5
PPFIA3-206ENST00000602655 KIAA1524Q8TCG1 905 aa18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 FAM89AQ96GI7 184 aa18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 ZDHHC9Q9Y397 364 aa18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 NBPF26B4DH59 902 aa18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 HNRNPH2P55795 449 aaKnown RBP18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 NBPF14Q5TI25 921 aa18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 NBPF10Q6P3W6 841 aaKnown RBP18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 CASC1Q6TDU7 716 aa18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 UNC5CLQ8IV45 518 aa18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 NBPF15Q8N660 670 aa18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 NOL10Q9BSC4 688 aaKnown RBP18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 GRM8O00222 908 aa18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 TSPYL1Q9H0U9 437 aa18.17■□□□□ 0.5
PPFIA3-206ENST00000602655 IGKV5-2P06315 115 aa18.16■□□□□ 0.5
PPFIA3-206ENST00000602655 G3BP1Q13283 466 aaKnown RBP eCLIP18.16■□□□□ 0.5
PPFIA3-206ENST00000602655 AACSQ86V21 672 aa18.16■□□□□ 0.5
PPFIA3-206ENST00000602655 C10orf67Q8IYJ2 551 aa18.16■□□□□ 0.5
PPFIA3-206ENST00000602655 LTN1O94822 1766 aa18.16■□□□□ 0.5
PPFIA3-206ENST00000602655 POLR3GO15318 223 aaPredicted RBP18.16■□□□□ 0.5
PPFIA3-206ENST00000602655 PDIA6Q15084 440 aa18.16■□□□□ 0.5
PPFIA3-206ENST00000602655 PTF1AQ7RTS3 328 aa18.16■□□□□ 0.5
PPFIA3-206ENST00000602655 SPTLC3Q9NUV7 552 aa18.16■□□□□ 0.5
PPFIA3-206ENST00000602655 UTRNP46939 3433 aa18.16■□□□□ 0.5
PPFIA3-206ENST00000602655 ZNF142P52746 1687 aaPredicted RBP18.16■□□□□ 0.5
PPFIA3-206ENST00000602655 PTGS1P23219 599 aa18.15■□□□□ 0.5
PPFIA3-206ENST00000602655 KIF18AQ8NI77 898 aa18.15■□□□□ 0.5
PPFIA3-206ENST00000602655 GTF3C6Q969F1 213 aa18.15■□□□□ 0.5
PPFIA3-206ENST00000602655 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
PPFIA3-206ENST00000602655 NWD1Q149M9 1564 aa18.15■□□□□ 0.5
PPFIA3-206ENST00000602655 EDC3Q96F86 508 aaKnown RBP18.15■□□□□ 0.5
PPFIA3-206ENST00000602655 RGS12O14924 1447 aa18.15■□□□□ 0.5
PPFIA3-206ENST00000602655 IFIT2P09913 472 aaKnown RBP18.15■□□□□ 0.5
PPFIA3-206ENST00000602655 GTF2A1P52655 376 aaPredicted RBP18.15■□□□□ 0.5
PPFIA3-206ENST00000602655 UVSSAQ2YD98 709 aa18.15■□□□□ 0.5
PPFIA3-206ENST00000602655 GPATCH11Q8N954 259 aa18.15■□□□□ 0.5
PPFIA3-206ENST00000602655 BOLA2Q9H3K6 86 aa18.15■□□□□ 0.5
PPFIA3-206ENST00000602655 ADCY9O60503 1353 aa18.14■□□□□ 0.5
PPFIA3-206ENST00000602655 KDM4AO75164 1064 aa18.14■□□□□ 0.5
PPFIA3-206ENST00000602655 MX1P20591 662 aa18.14■□□□□ 0.5
PPFIA3-206ENST00000602655 PDE1AP54750 535 aa18.14■□□□□ 0.5
PPFIA3-206ENST00000602655 GIMAP6Q6P9H5 292 aa18.14■□□□□ 0.5
PPFIA3-206ENST00000602655 LMBR1LQ6UX01 489 aa18.14■□□□□ 0.5
PPFIA3-206ENST00000602655 RHPN1Q8TCX5 695 aa18.14■□□□□ 0.5
PPFIA3-206ENST00000602655 CAMTA1Q9Y6Y1 1673 aa18.14■□□□□ 0.49
PPFIA3-206ENST00000602655 HDAC5Q9UQL6 1122 aa18.14■□□□□ 0.49
PPFIA3-206ENST00000602655 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.14■□□□□ 0.49
PPFIA3-206ENST00000602655 CYP2E1P05181 493 aaPredicted RBP18.13■□□□□ 0.49
PPFIA3-206ENST00000602655 USP48Q86UV5 1035 aa18.13■□□□□ 0.49
PPFIA3-206ENST00000602655 CWC27Q6UX04 472 aaKnown RBP18.13■□□□□ 0.49
PPFIA3-206ENST00000602655 LOC102724159A0A0B4J2E5 919 aa18.12■□□□□ 0.49
PPFIA3-206ENST00000602655 PWP2Q15269 919 aaKnown RBP18.12■□□□□ 0.49
PPFIA3-206ENST00000602655 LINS1Q8NG48 757 aa18.12■□□□□ 0.49
PPFIA3-206ENST00000602655 FIBPO43427 364 aa18.12■□□□□ 0.49
PPFIA3-206ENST00000602655 TTC22Q5TAA0 569 aa18.12■□□□□ 0.49
PPFIA3-206ENST00000602655 CCDC186Q7Z3E2 898 aa18.12■□□□□ 0.49
PPFIA3-206ENST00000602655 FEZ2Q9UHY8 353 aaPredicted RBP18.12■□□□□ 0.49
PPFIA3-206ENST00000602655 ATP6V1AP38606 617 aa18.11■□□□□ 0.49
PPFIA3-206ENST00000602655 LRMPQ12912 555 aa18.11■□□□□ 0.49
PPFIA3-206ENST00000602655 CLASRPQ8N2M8 674 aaKnown RBP18.11■□□□□ 0.49
PPFIA3-206ENST00000602655 ZBTB1Q9Y2K1 713 aa18.11■□□□□ 0.49
PPFIA3-206ENST00000602655 RGPD5Q99666 1765 aa18.11■□□□□ 0.49
PPFIA3-206ENST00000602655 MORC2Q9Y6X9 1032 aaPredicted RBP18.11■□□□□ 0.49
PPFIA3-206ENST00000602655 CTIFO43310 598 aaKnown RBP18.11■□□□□ 0.49
PPFIA3-206ENST00000602655 NEURL1BA8MQ27 555 aa18.1■□□□□ 0.49
PPFIA3-206ENST00000602655 SMTNL1A8MU46 457 aa18.1■□□□□ 0.49
PPFIA3-206ENST00000602655 TLR7Q9NYK1 1049 aaKnown RBP18.1■□□□□ 0.49
PPFIA3-206ENST00000602655 CHGBP05060 677 aa18.1■□□□□ 0.49
PPFIA3-206ENST00000602655 GCKRQ14397 625 aa18.1■□□□□ 0.49
PPFIA3-206ENST00000602655 NEK11Q8NG66 645 aa18.1■□□□□ 0.49
PPFIA3-206ENST00000602655 TPM3P06753 285 aa18.09■□□□□ 0.49
PPFIA3-206ENST00000602655 CCDC183Q5T5S1 534 aa18.09■□□□□ 0.49
PPFIA3-206ENST00000602655 UPF3BQ9BZI7 483 aaKnown RBP18.09■□□□□ 0.49
PPFIA3-206ENST00000602655 KCNF1Q9H3M0 494 aa18.09■□□□□ 0.49
PPFIA3-206ENST00000602655 ATG3Q9NT62 314 aa18.09■□□□□ 0.49
PPFIA3-206ENST00000602655 RAD51AP2Q09MP3 1159 aa18.09■□□□□ 0.49
PPFIA3-206ENST00000602655 ZNF397Q8NF99 534 aaPredicted RBP18.09■□□□□ 0.49
PPFIA3-206ENST00000602655 TRIM5Q9C035 493 aa18.09■□□□□ 0.49
PPFIA3-206ENST00000602655 HLFQ16534 295 aa18.08■□□□□ 0.49
PPFIA3-206ENST00000602655 TEX35Q5T0J7 233 aa18.08■□□□□ 0.49
PPFIA3-206ENST00000602655 TMX3Q96JJ7 454 aa18.08■□□□□ 0.49
PPFIA3-206ENST00000602655 RASSF4Q9H2L5 321 aa18.08■□□□□ 0.49
PPFIA3-206ENST00000602655 SNRKQ9NRH2 765 aa18.08■□□□□ 0.49
PPFIA3-206ENST00000602655 TIMM10P62072 90 aa18.08■□□□□ 0.49
PPFIA3-206ENST00000602655 HELBQ8NG08 1087 aaPredicted RBP18.08■□□□□ 0.49
PPFIA3-206ENST00000602655 SLC20A2Q08357 652 aa18.08■□□□□ 0.48
PPFIA3-206ENST00000602655 BRD2P25440 801 aaKnown RBP18.07■□□□□ 0.48
PPFIA3-206ENST00000602655 ELF2Q15723 593 aa18.07■□□□□ 0.48
PPFIA3-206ENST00000602655 METTL22Q9BUU2 404 aaPredicted RBP18.07■□□□□ 0.48
PPFIA3-206ENST00000602655 USP26Q9BXU7 913 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms