RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 USP17L5A8MUK1 530 aa5.7□□□□□ -1.5
SGMS1-207ENST00000602619 TGFB1P01137 390 aa5.7□□□□□ -1.5
SGMS1-207ENST00000602619 ALDH16A1Q8IZ83 802 aa5.7□□□□□ -1.5
SGMS1-207ENST00000602619 DEPDC4Q8N2C3 294 aa5.7□□□□□ -1.5
SGMS1-207ENST00000602619 TMEM130Q8N3G9 435 aa5.7□□□□□ -1.5
SGMS1-207ENST00000602619 SERPINA10Q9UK55 444 aa5.7□□□□□ -1.5
SGMS1-207ENST00000602619 CHMP3Q9Y3E7 222 aa5.7□□□□□ -1.5
SGMS1-207ENST00000602619 USP17L3A6NCW0 530 aa5.69□□□□□ -1.5
SGMS1-207ENST00000602619 USP17L4A6NCW7 530 aa5.69□□□□□ -1.5
SGMS1-207ENST00000602619 ARID3CA6NKF2 412 aa5.69□□□□□ -1.5
SGMS1-207ENST00000602619 SRPK2P78362 688 aaKnown RBP5.69□□□□□ -1.5
SGMS1-207ENST00000602619 ELMSAN1Q6PJG2 1045 aa5.69□□□□□ -1.5
SGMS1-207ENST00000602619 USP17L2Q6R6M4 530 aa5.69□□□□□ -1.5
SGMS1-207ENST00000602619 USP17L1Q7RTZ2 530 aa5.69□□□□□ -1.5
SGMS1-207ENST00000602619 CCDC82Q8N4S0 544 aa5.69□□□□□ -1.5
SGMS1-207ENST00000602619 TTC9Q92623 222 aa5.69□□□□□ -1.5
SGMS1-207ENST00000602619 ZFATQ9P243 1243 aa5.69□□□□□ -1.5
SGMS1-207ENST00000602619 KIAA1024Q9UPX6 916 aa5.69□□□□□ -1.5
SGMS1-207ENST00000602619 F8W735 103 aaPredicted RBP5.68□□□□□ -1.5
SGMS1-207ENST00000602619 C21orf2O43822 256 aa5.68□□□□□ -1.5
SGMS1-207ENST00000602619 IGLV1-40P01703 118 aa5.68□□□□□ -1.5
SGMS1-207ENST00000602619 GRNP28799 593 aaKnown RBP5.68□□□□□ -1.5
SGMS1-207ENST00000602619 PCSK7Q16549 785 aa5.68□□□□□ -1.5
SGMS1-207ENST00000602619 TPCN2Q8NHX9 752 aa5.68□□□□□ -1.5
SGMS1-207ENST00000602619 TRPM4Q8TD43 1214 aa5.68□□□□□ -1.5
SGMS1-207ENST00000602619 RAXQ9Y2V3 346 aa5.68□□□□□ -1.5
SGMS1-207ENST00000602619 PTCD1O75127 700 aaKnown RBP5.67□□□□□ -1.5
SGMS1-207ENST00000602619 MAP3K6O95382 1288 aa5.67□□□□□ -1.5
SGMS1-207ENST00000602619 MLLT1Q03111 559 aaPredicted RBP5.67□□□□□ -1.5
SGMS1-207ENST00000602619 CCDC102BQ68D86 513 aa5.67□□□□□ -1.5
SGMS1-207ENST00000602619 CCDC97Q96F63 343 aaPredicted RBP5.67□□□□□ -1.5
SGMS1-207ENST00000602619 KRTAP4-2Q9BYR5 136 aa5.67□□□□□ -1.5
SGMS1-207ENST00000602619 MRPL18Q9H0U6 180 aaKnown RBP5.67□□□□□ -1.5
SGMS1-207ENST00000602619 TFIP11Q9UBB9 837 aaKnown RBP5.67□□□□□ -1.5
SGMS1-207ENST00000602619 DMGDHQ9UI17 866 aaKnown RBP5.67□□□□□ -1.5
SGMS1-207ENST00000602619 PPP1R12BO60237 982 aaPredicted RBP5.66□□□□□ -1.5
SGMS1-207ENST00000602619 TARSP26639 723 aaKnown RBP5.66□□□□□ -1.5
SGMS1-207ENST00000602619 CLDN10P78369 228 aa5.66□□□□□ -1.5
SGMS1-207ENST00000602619 KANK4Q5T7N3 995 aaPredicted RBP5.66□□□□□ -1.5
SGMS1-207ENST00000602619 Q6ZS46 218 aa5.66□□□□□ -1.5
SGMS1-207ENST00000602619 DHX32Q7L7V1 743 aaKnown RBP5.66□□□□□ -1.5
SGMS1-207ENST00000602619 SMG9Q9H0W8 520 aaKnown RBP5.66□□□□□ -1.5
SGMS1-207ENST00000602619 STOML1Q9UBI4 398 aa5.66□□□□□ -1.5
SGMS1-207ENST00000602619 BCS1LQ9Y276 419 aa5.66□□□□□ -1.5
SGMS1-207ENST00000602619 GSC2O15499 205 aa5.65□□□□□ -1.5
SGMS1-207ENST00000602619 SPINK2P20155 84 aa5.65□□□□□ -1.5
SGMS1-207ENST00000602619 HIF1AQ16665 826 aa5.65□□□□□ -1.5
SGMS1-207ENST00000602619 IER5Q5VY09 327 aa5.65□□□□□ -1.5
SGMS1-207ENST00000602619 HFE2Q6ZVN8 426 aa5.65□□□□□ -1.5
SGMS1-207ENST00000602619 KRT25Q7Z3Z0 450 aa5.65□□□□□ -1.5
SGMS1-207ENST00000602619 ZDHHC13Q8IUH4 622 aa5.65□□□□□ -1.5
SGMS1-207ENST00000602619 AGGF1Q8N302 714 aaeCLIP5.65□□□□□ -1.5
SGMS1-207ENST00000602619 TSEN2Q8NCE0 465 aaKnown RBP5.65□□□□□ -1.5
SGMS1-207ENST00000602619 IFT43Q96FT9 208 aa5.65□□□□□ -1.5
SGMS1-207ENST00000602619 NGLY1Q96IV0 654 aa5.65□□□□□ -1.5
SGMS1-207ENST00000602619 UBL7Q96S82 380 aaPredicted RBP5.65□□□□□ -1.5
SGMS1-207ENST00000602619 ATAD2Q6PL18 1390 aa5.65□□□□□ -1.51
SGMS1-207ENST00000602619 FAM196BA6NMK8 535 aa5.64□□□□□ -1.51
SGMS1-207ENST00000602619 M0R2N6 131 aa5.64□□□□□ -1.51
SGMS1-207ENST00000602619 SUPT5HO00267 1087 aaKnown RBP5.64□□□□□ -1.51
SGMS1-207ENST00000602619 DKK1O94907 266 aa5.64□□□□□ -1.51
SGMS1-207ENST00000602619 TRIM50Q86XT4 487 aa5.64□□□□□ -1.51
SGMS1-207ENST00000602619 SIX5Q8N196 739 aa5.64□□□□□ -1.51
SGMS1-207ENST00000602619 C2orf49Q9BVC5 232 aaPredicted RBP5.64□□□□□ -1.51
SGMS1-207ENST00000602619 PPP1R15AO75807 674 aaPredicted RBP5.63□□□□□ -1.51
SGMS1-207ENST00000602619 GLB1P16278 677 aa5.63□□□□□ -1.51
SGMS1-207ENST00000602619 LMOD1P29536 600 aaPredicted RBP5.63□□□□□ -1.51
SGMS1-207ENST00000602619 INPP5BP32019 993 aa5.63□□□□□ -1.51
SGMS1-207ENST00000602619 JAG1P78504 1218 aa5.63□□□□□ -1.51
SGMS1-207ENST00000602619 GPLD1P80108 840 aa5.63□□□□□ -1.51
SGMS1-207ENST00000602619 ELOAQ14241 798 aaKnown RBP5.63□□□□□ -1.51
SGMS1-207ENST00000602619 DTX1Q86Y01 620 aa5.63□□□□□ -1.51
SGMS1-207ENST00000602619 STAG2Q8N3U4 1231 aa5.63□□□□□ -1.51
SGMS1-207ENST00000602619 PBXIP1Q96AQ6 731 aa5.63□□□□□ -1.51
SGMS1-207ENST00000602619 ADGRE2Q9UHX3 823 aa5.63□□□□□ -1.51
SGMS1-207ENST00000602619 PRR19A6NJB7 356 aa5.62□□□□□ -1.51
SGMS1-207ENST00000602619 TGFBR3LH3BV60 316 aa5.62□□□□□ -1.51
SGMS1-207ENST00000602619 SASH3O75995 380 aa5.62□□□□□ -1.51
SGMS1-207ENST00000602619 ATP1A2P50993 1020 aa5.62□□□□□ -1.51
SGMS1-207ENST00000602619 SETDB1Q15047 1291 aa5.62□□□□□ -1.51
SGMS1-207ENST00000602619 INTS5Q6P9B9 1019 aaKnown RBP5.62□□□□□ -1.51
SGMS1-207ENST00000602619 ARMC10Q8N2F6 343 aa5.62□□□□□ -1.51
SGMS1-207ENST00000602619 LARGE2Q8N3Y3 721 aa5.62□□□□□ -1.51
SGMS1-207ENST00000602619 IL22RA1Q8N6P7 574 aa5.62□□□□□ -1.51
SGMS1-207ENST00000602619 MKRN1Q9UHC7 482 aaKnown RBP5.62□□□□□ -1.51
SGMS1-207ENST00000602619 ATG7O95352 703 aa5.61□□□□□ -1.51
SGMS1-207ENST00000602619 WNT11O96014 354 aa5.61□□□□□ -1.51
SGMS1-207ENST00000602619 RARAP10276 462 aa5.61□□□□□ -1.51
SGMS1-207ENST00000602619 NFIAQ12857 509 aa5.61□□□□□ -1.51
SGMS1-207ENST00000602619 PTK7Q13308 1070 aa5.61□□□□□ -1.51
SGMS1-207ENST00000602619 CHMP7Q8WUX9 453 aaPredicted RBP5.61□□□□□ -1.51
SGMS1-207ENST00000602619 SCG3Q8WXD2 468 aaKnown RBP5.61□□□□□ -1.51
SGMS1-207ENST00000602619 ARXQ96QS3 562 aa5.61□□□□□ -1.51
SGMS1-207ENST00000602619 J3QW42 95 aa5.6□□□□□ -1.51
SGMS1-207ENST00000602619 DHX15O43143 795 aaKnown RBP5.6□□□□□ -1.51
SGMS1-207ENST00000602619 EPB42P16452 691 aa5.6□□□□□ -1.51
SGMS1-207ENST00000602619 EIF2AK2P19525 551 aaKnown RBP5.6□□□□□ -1.51
SGMS1-207ENST00000602619 GRIK1P39086 918 aa5.6□□□□□ -1.51
SGMS1-207ENST00000602619 RTN1Q16799 776 aa5.6□□□□□ -1.51
SGMS1-207ENST00000602619 CRTC2Q53ET0 693 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms