RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 TBC1D32Q96NH3 1257 aa9.06□□□□□ -0.96
HCG18-244ENST00000602516 TEX13AQ9BXU3 409 aaPredicted RBP9.06□□□□□ -0.96
HCG18-244ENST00000602516 PUF60Q9UHX1 559 aaKnown RBP9.06□□□□□ -0.96
HCG18-244ENST00000602516 NEFHP12036 1026 aa9.06□□□□□ -0.96
HCG18-244ENST00000602516 SLC4A3P48751 1232 aa9.06□□□□□ -0.96
HCG18-244ENST00000602516 APLP1P51693 650 aa9.06□□□□□ -0.96
HCG18-244ENST00000602516 NLRP6P59044 892 aa9.06□□□□□ -0.96
HCG18-244ENST00000602516 PPP2R5AQ15172 486 aa9.06□□□□□ -0.96
HCG18-244ENST00000602516 INTS3Q68E01 1043 aaKnown RBP9.06□□□□□ -0.96
HCG18-244ENST00000602516 GCC1Q96CN9 775 aa9.06□□□□□ -0.96
HCG18-244ENST00000602516 MFRPQ9BY79 579 aa9.06□□□□□ -0.96
HCG18-244ENST00000602516 C22orf23Q9BZE7 217 aa9.06□□□□□ -0.96
HCG18-244ENST00000602516 CWC25Q9NXE8 425 aaPredicted RBP9.06□□□□□ -0.96
HCG18-244ENST00000602516 CTDP1Q9Y5B0 961 aaPredicted RBP9.06□□□□□ -0.96
HCG18-244ENST00000602516 LTN1O94822 1766 aa9.05□□□□□ -0.96
HCG18-244ENST00000602516 HTATSF1O43719 755 aaKnown RBP9.05□□□□□ -0.96
HCG18-244ENST00000602516 SLFN14P0C7P3 912 aa9.05□□□□□ -0.96
HCG18-244ENST00000602516 AMPHP49418 695 aa9.05□□□□□ -0.96
HCG18-244ENST00000602516 FOSBP53539 338 aa9.05□□□□□ -0.96
HCG18-244ENST00000602516 AMOTQ4VCS5 1084 aa9.05□□□□□ -0.96
HCG18-244ENST00000602516 IGSF5Q9NSI5 407 aa9.05□□□□□ -0.96
HCG18-244ENST00000602516 UNCXA6NJT0 531 aa9.05□□□□□ -0.96
HCG18-244ENST00000602516 CREB3O43889 395 aa9.05□□□□□ -0.96
HCG18-244ENST00000602516 HOXC9P31274 260 aa9.05□□□□□ -0.96
HCG18-244ENST00000602516 HMGN5P82970 282 aaKnown RBP9.05□□□□□ -0.96
HCG18-244ENST00000602516 CHD1LQ86WJ1 897 aa9.05□□□□□ -0.96
HCG18-244ENST00000602516 SIRT2Q8IXJ6 389 aa9.05□□□□□ -0.96
HCG18-244ENST00000602516 PHRF1Q9P1Y6 1649 aaKnown RBP9.05□□□□□ -0.96
HCG18-244ENST00000602516 ANKRD18BA2A2Z9 1011 aa9.04□□□□□ -0.96
HCG18-244ENST00000602516 ANKRD62A6NC57 917 aa9.04□□□□□ -0.96
HCG18-244ENST00000602516 EFCAB3Q8N7B9 438 aa9.04□□□□□ -0.96
HCG18-244ENST00000602516 RMI1Q9H9A7 625 aa9.04□□□□□ -0.96
HCG18-244ENST00000602516 ADGRL3Q9HAR2 1447 aa9.04□□□□□ -0.96
HCG18-244ENST00000602516 RTL1A6NKG5 1358 aa9.04□□□□□ -0.96
HCG18-244ENST00000602516 PTPRCP08575 1304 aa9.04□□□□□ -0.96
HCG18-244ENST00000602516 FOXO3O43524 673 aa9.04□□□□□ -0.96
HCG18-244ENST00000602516 FXR2P51116 673 aaKnown RBP eCLIP9.04□□□□□ -0.96
HCG18-244ENST00000602516 IRF5Q13568 498 aa9.04□□□□□ -0.96
HCG18-244ENST00000602516 KRT24Q2M2I5 525 aa9.04□□□□□ -0.96
HCG18-244ENST00000602516 MAGEC2Q9UBF1 373 aaPredicted RBP9.04□□□□□ -0.96
HCG18-244ENST00000602516 NFAT5O94916 1531 aa9.04□□□□□ -0.96
HCG18-244ENST00000602516 TRDNQ13061 729 aa9.03□□□□□ -0.96
HCG18-244ENST00000602516 TMX4Q9H1E5 349 aaPredicted RBP9.03□□□□□ -0.96
HCG18-244ENST00000602516 TMX1Q9H3N1 280 aa9.03□□□□□ -0.96
HCG18-244ENST00000602516 UPF2Q9HAU5 1272 aaKnown RBP9.03□□□□□ -0.96
HCG18-244ENST00000602516 IRAK4Q9NWZ3 460 aa9.03□□□□□ -0.96
HCG18-244ENST00000602516 STK10O94804 968 aaKnown RBP9.03□□□□□ -0.96
HCG18-244ENST00000602516 NAT2P11245 290 aa9.03□□□□□ -0.96
HCG18-244ENST00000602516 BDNFP23560 247 aa9.03□□□□□ -0.96
HCG18-244ENST00000602516 MRE11P49959 708 aa9.03□□□□□ -0.96
HCG18-244ENST00000602516 IFT88Q13099 833 aa9.03□□□□□ -0.96
HCG18-244ENST00000602516 SF3B2Q13435 895 aaKnown RBP9.03□□□□□ -0.96
HCG18-244ENST00000602516 OGFOD1Q8N543 542 aa9.03□□□□□ -0.96
HCG18-244ENST00000602516 ABTB2Q8N961 1025 aa9.03□□□□□ -0.96
HCG18-244ENST00000602516 TBC1D22AQ8WUA7 517 aa9.03□□□□□ -0.96
HCG18-244ENST00000602516 CACNA1FO60840 1977 aa9.03□□□□□ -0.96
HCG18-244ENST00000602516 SH3BP5O60239 455 aa9.02□□□□□ -0.96
HCG18-244ENST00000602516 C16orf87Q6PH81 154 aa9.02□□□□□ -0.96
HCG18-244ENST00000602516 RTF1Q92541 710 aaKnown RBP9.02□□□□□ -0.96
HCG18-244ENST00000602516 LARP6Q9BRS8 491 aaKnown RBP9.02□□□□□ -0.96
HCG18-244ENST00000602516 TOMM22Q9NS69 142 aa9.02□□□□□ -0.96
HCG18-244ENST00000602516 CHCHD3Q9NX63 227 aaKnown RBP9.02□□□□□ -0.96
HCG18-244ENST00000602516 PCDHGA4Q9Y5G9 962 aa9.02□□□□□ -0.96
HCG18-244ENST00000602516 CCDC196A0A1B0GTZ2 297 aa9.02□□□□□ -0.97
HCG18-244ENST00000602516 ERICH4A6NGS2 130 aa9.02□□□□□ -0.97
HCG18-244ENST00000602516 MAGEA8P43361 318 aa9.02□□□□□ -0.97
HCG18-244ENST00000602516 TTC30BQ8N4P2 665 aa9.02□□□□□ -0.97
HCG18-244ENST00000602516 TATDN2Q93075 761 aa9.02□□□□□ -0.97
HCG18-244ENST00000602516 TPX2Q9ULW0 747 aaKnown RBP9.02□□□□□ -0.97
HCG18-244ENST00000602516 OATP04181 439 aa9.02□□□□□ -0.97
HCG18-244ENST00000602516 CCDC15Q0P6D6 951 aa9.02□□□□□ -0.97
HCG18-244ENST00000602516 RASA3Q14644 834 aa9.02□□□□□ -0.97
HCG18-244ENST00000602516 TRIM74Q86UV6 250 aa9.02□□□□□ -0.97
HCG18-244ENST00000602516 TRIM73Q86UV7 250 aa9.02□□□□□ -0.97
HCG18-244ENST00000602516 ZNF710Q8N1W2 664 aa9.02□□□□□ -0.97
HCG18-244ENST00000602516 LNPKQ9C0E8 428 aa9.02□□□□□ -0.97
HCG18-244ENST00000602516 LTBP4Q8N2S1 1624 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 IPO5O00410 1097 aaKnown RBP9.01□□□□□ -0.97
HCG18-244ENST00000602516 BMP2KLQ5H9B9 411 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 ZSCAN30Q86W11 494 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 MORC4Q8TE76 937 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 FMNL2Q96PY5 1086 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 ATP10DQ9P241 1426 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 FAM208AQ9UK61 1670 aaKnown RBP9.01□□□□□ -0.97
HCG18-244ENST00000602516 PPFIA2O75334 1257 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 FLT3P36888 993 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 PDAP1Q13442 181 aaKnown RBP9.01□□□□□ -0.97
HCG18-244ENST00000602516 BECN1Q14457 450 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 TTC30AQ86WT1 665 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 LZTS2Q9BRK4 669 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 BABAM1Q9NWV8 329 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 NRBP1Q9UHY1 535 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 TSPYL4Q9UJ04 414 aa9.01□□□□□ -0.97
HCG18-244ENST00000602516 ZNF335Q9H4Z2 1342 aaPredicted RBP9□□□□□ -0.97
HCG18-244ENST00000602516 GNAT3A8MTJ3 354 aa9□□□□□ -0.97
HCG18-244ENST00000602516 ANKRD45Q5TZF3 282 aa9□□□□□ -0.97
HCG18-244ENST00000602516 IP6K1Q92551 441 aa9□□□□□ -0.97
HCG18-244ENST00000602516 DCTPP1Q9H773 170 aa9□□□□□ -0.97
HCG18-244ENST00000602516 N4BP2Q86UW6 1770 aaPredicted RBP9□□□□□ -0.97
HCG18-244ENST00000602516 SOS1Q07889 1333 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms