RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 GLIS2Q9BZE0 524 aaPredicted RBP24.17■■□□□ 1.46
IRF3-231ENST00000602190 TCERG1O14776 1098 aaKnown RBP24.16■■□□□ 1.46
IRF3-231ENST00000602190 CELF2O95319 508 aaKnown RBP24.16■■□□□ 1.46
IRF3-231ENST00000602190 CIAPIN1Q6FI81 312 aa24.16■■□□□ 1.46
IRF3-231ENST00000602190 NEFMP07197 916 aa24.15■■□□□ 1.46
IRF3-231ENST00000602190 NLRP10Q86W26 655 aa24.15■■□□□ 1.46
IRF3-231ENST00000602190 YDJCA8MPS7 323 aa24.14■■□□□ 1.45
IRF3-231ENST00000602190 DPP8Q6V1X1 898 aaPredicted RBP24.14■■□□□ 1.45
IRF3-231ENST00000602190 MPNDQ8N594 471 aa24.14■■□□□ 1.45
IRF3-231ENST00000602190 TRPM4Q8TD43 1214 aa24.14■■□□□ 1.45
IRF3-231ENST00000602190 GRAPQ13588 217 aa24.13■■□□□ 1.45
IRF3-231ENST00000602190 PAXIP1Q6ZW49 1069 aaPredicted RBP24.13■■□□□ 1.45
IRF3-231ENST00000602190 GRAPLQ8TC17 118 aaPredicted RBP24.13■■□□□ 1.45
IRF3-231ENST00000602190 COL4A1P02462 1669 aa24.12■■□□□ 1.45
IRF3-231ENST00000602190 MLLT1Q03111 559 aaPredicted RBP24.12■■□□□ 1.45
IRF3-231ENST00000602190 TNIP1Q15025 636 aa24.12■■□□□ 1.45
IRF3-231ENST00000602190 HSP90AB3PQ58FF7 597 aa24.12■■□□□ 1.45
IRF3-231ENST00000602190 CDC37L1Q7L3B6 337 aa24.12■■□□□ 1.45
IRF3-231ENST00000602190 TMC4Q7Z404 712 aa24.12■■□□□ 1.45
IRF3-231ENST00000602190 TMX4Q9H1E5 349 aaPredicted RBP24.12■■□□□ 1.45
IRF3-231ENST00000602190 TSKSQ9UJT2 592 aa24.12■■□□□ 1.45
IRF3-231ENST00000602190 POLR2AP24928 1970 aaKnown RBP24.12■■□□□ 1.45
IRF3-231ENST00000602190 TNRC18O15417 2968 aaPredicted RBP24.11■■□□□ 1.45
IRF3-231ENST00000602190 MCOLN1Q9GZU1 580 aa24.11■■□□□ 1.45
IRF3-231ENST00000602190 TSPYL4Q9UJ04 414 aa24.11■■□□□ 1.45
IRF3-231ENST00000602190 ANXA1P04083 346 aa24.1■■□□□ 1.45
IRF3-231ENST00000602190 TCIRG1Q13488 830 aa24.1■■□□□ 1.45
IRF3-231ENST00000602190 DPF2Q92785 391 aa24.1■■□□□ 1.45
IRF3-231ENST00000602190 PNNQ9H307 717 aaKnown RBP24.1■■□□□ 1.45
IRF3-231ENST00000602190 SHTN1A0MZ66 631 aa24.09■■□□□ 1.45
IRF3-231ENST00000602190 CCDC85CA6NKD9 419 aa24.09■■□□□ 1.45
IRF3-231ENST00000602190 RAD17O75943 681 aa24.09■■□□□ 1.45
IRF3-231ENST00000602190 HCLS1P14317 486 aaPredicted RBP24.09■■□□□ 1.45
IRF3-231ENST00000602190 GRM1Q13255 1194 aa24.09■■□□□ 1.45
IRF3-231ENST00000602190 CNOT7Q9UIV1 285 aaKnown RBP24.09■■□□□ 1.45
IRF3-231ENST00000602190 SH3TC1Q8TE82 1336 aa24.09■■□□□ 1.45
IRF3-231ENST00000602190 NOGQ13253 232 aa24.08■■□□□ 1.45
IRF3-231ENST00000602190 COPS6Q7L5N1 327 aa24.08■■□□□ 1.45
IRF3-231ENST00000602190 SCN9AQ15858 1988 aa24.07■■□□□ 1.44
IRF3-231ENST00000602190 EIF2S2P20042 333 aaKnown RBP24.07■■□□□ 1.44
IRF3-231ENST00000602190 DDX46Q7L014 1031 aaKnown RBP24.07■■□□□ 1.44
IRF3-231ENST00000602190 ZIC5Q96T25 663 aa24.07■■□□□ 1.44
IRF3-231ENST00000602190 ZNF609O15014 1411 aa24.07■■□□□ 1.44
IRF3-231ENST00000602190 MAPK8IP3Q9UPT6 1336 aa24.07■■□□□ 1.44
IRF3-231ENST00000602190 PSME4Q14997 1843 aa24.06■■□□□ 1.44
IRF3-231ENST00000602190 FAM155AB1AL88 458 aaPredicted RBP24.06■■□□□ 1.44
IRF3-231ENST00000602190 XAGE3Q8WTP9 111 aa24.06■■□□□ 1.44
IRF3-231ENST00000602190 BCL2L13Q9BXK5 485 aa24.06■■□□□ 1.44
IRF3-231ENST00000602190 SF3B3Q15393 1217 aaKnown RBP24.05■■□□□ 1.44
IRF3-231ENST00000602190 MICALL2Q8IY33 904 aa24.05■■□□□ 1.44
IRF3-231ENST00000602190 TRMT112Q9UI30 125 aaKnown RBP24.04■■□□□ 1.44
IRF3-231ENST00000602190 PDE4DIPQ5VU43 2346 aa24.04■■□□□ 1.44
IRF3-231ENST00000602190 ISCA1Q9BUE6 129 aa24.03■■□□□ 1.44
IRF3-231ENST00000602190 RTL9Q8NET4 1388 aa24.03■■□□□ 1.44
IRF3-231ENST00000602190 H7C1D1 291 aa24.02■■□□□ 1.44
IRF3-231ENST00000602190 PSMD14O00487 310 aa24.02■■□□□ 1.44
IRF3-231ENST00000602190 EGFRP00533 1210 aa24.02■■□□□ 1.44
IRF3-231ENST00000602190 TMPOP42166 694 aaKnown RBP24.02■■□□□ 1.44
IRF3-231ENST00000602190 RIPK4P57078 832 aa24.02■■□□□ 1.44
IRF3-231ENST00000602190 SAGE1Q9NXZ1 904 aa24.02■■□□□ 1.44
IRF3-231ENST00000602190 ZBTB12Q9Y330 459 aaPredicted RBP24.02■■□□□ 1.44
IRF3-231ENST00000602190 CHL1O00533 1208 aa24.01■■□□□ 1.43
IRF3-231ENST00000602190 RPS12P25398 132 aaKnown RBP24.01■■□□□ 1.43
IRF3-231ENST00000602190 HUNKP57058 714 aa24.01■■□□□ 1.43
IRF3-231ENST00000602190 USP48Q86UV5 1035 aa24.01■■□□□ 1.43
IRF3-231ENST00000602190 AKAP11Q9UKA4 1901 aa24.01■■□□□ 1.43
IRF3-231ENST00000602190 WASHC4Q2M389 1173 aa24■■□□□ 1.43
IRF3-231ENST00000602190 DLK2Q6UY11 383 aa24■■□□□ 1.43
IRF3-231ENST00000602190 SAMD7Q7Z3H4 446 aa24■■□□□ 1.43
IRF3-231ENST00000602190 CELF1Q92879 486 aaKnown RBP24■■□□□ 1.43
IRF3-231ENST00000602190 ZNF408Q9H9D4 720 aa24■■□□□ 1.43
IRF3-231ENST00000602190 POLLQ9UGP5 575 aa24■■□□□ 1.43
IRF3-231ENST00000602190 LMOD3Q0VAK6 560 aa23.99■■□□□ 1.43
IRF3-231ENST00000602190 AIMP1Q12904 312 aaKnown RBP23.99■■□□□ 1.43
IRF3-231ENST00000602190 DGKZQ13574 1117 aa23.99■■□□□ 1.43
IRF3-231ENST00000602190 RGMBQ6NW40 437 aa23.99■■□□□ 1.43
IRF3-231ENST00000602190 PLBD2Q8NHP8 589 aa23.99■■□□□ 1.43
IRF3-231ENST00000602190 HOXB7P09629 217 aa23.98■■□□□ 1.43
IRF3-231ENST00000602190 TRIM28Q13263 835 aaKnown RBP23.98■■□□□ 1.43
IRF3-231ENST00000602190 GBA2Q9HCG7 927 aaPredicted RBP23.98■■□□□ 1.43
IRF3-231ENST00000602190 KRT24Q2M2I5 525 aa23.97■■□□□ 1.43
IRF3-231ENST00000602190 KRT26Q7Z3Y9 468 aa23.97■■□□□ 1.43
IRF3-231ENST00000602190 DBNDD1Q9H9R9 158 aa23.97■■□□□ 1.43
IRF3-231ENST00000602190 CCDC102AQ96A19 550 aa23.96■■□□□ 1.43
IRF3-231ENST00000602190 PODXL2Q9NZ53 605 aa23.96■■□□□ 1.43
IRF3-231ENST00000602190 CHPF2Q9P2E5 772 aa23.96■■□□□ 1.43
IRF3-231ENST00000602190 ZNF646O15015 1829 aaPredicted RBP23.96■■□□□ 1.43
IRF3-231ENST00000602190 ECE2O60344 883 aa23.95■■□□□ 1.42
IRF3-231ENST00000602190 VIL1P09327 827 aaKnown RBP23.95■■□□□ 1.42
IRF3-231ENST00000602190 GPSM2P81274 684 aa23.95■■□□□ 1.42
IRF3-231ENST00000602190 TBC1D10BQ4KMP7 808 aaPredicted RBP23.95■■□□□ 1.42
IRF3-231ENST00000602190 NECTIN2Q92692 538 aa23.95■■□□□ 1.42
IRF3-231ENST00000602190 KCNQ5Q9NR82 932 aa23.95■■□□□ 1.42
IRF3-231ENST00000602190 PCDH10Q9P2E7 1040 aa23.95■■□□□ 1.42
IRF3-231ENST00000602190 NSFL1CQ9UNZ2 370 aaKnown RBP23.95■■□□□ 1.42
IRF3-231ENST00000602190 ANKRD13DQ6ZTN6 518 aa23.94■■□□□ 1.42
IRF3-231ENST00000602190 TBC1D16Q8TBP0 767 aa23.94■■□□□ 1.42
IRF3-231ENST00000602190 FAM89AQ96GI7 184 aa23.94■■□□□ 1.42
IRF3-231ENST00000602190 TRIM35Q9UPQ4 493 aa23.94■■□□□ 1.42
IRF3-231ENST00000602190 ADM5C9JUS6 153 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms