RNA–Protein interactions for RNA: ENST00000601361.1

FARP1-234, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-234ENST00000601361 RIC3Q7Z5B4 369 aa11.73□□□□□ -0.53
FARP1-234ENST00000601361 CRAMP1Q96RY5 1269 aa11.73□□□□□ -0.53
FARP1-234ENST00000601361 IQCA1LA6NCM1 817 aa11.72□□□□□ -0.53
FARP1-234ENST00000601361 ATP5J2-PTCD1G3V325 749 aa11.72□□□□□ -0.53
FARP1-234ENST00000601361 ZNF853P0CG23 659 aa11.72□□□□□ -0.53
FARP1-234ENST00000601361 MLLT1Q03111 559 aaPredicted RBP11.72□□□□□ -0.53
FARP1-234ENST00000601361 GRIPAP1Q4V328 841 aa11.72□□□□□ -0.53
FARP1-234ENST00000601361 SLC10A5Q5PT55 438 aa11.72□□□□□ -0.53
FARP1-234ENST00000601361 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
FARP1-234ENST00000601361 DDX46Q7L014 1031 aaKnown RBP11.72□□□□□ -0.53
FARP1-234ENST00000601361 PSMD1Q99460 953 aa11.72□□□□□ -0.53
FARP1-234ENST00000601361 ABCC4O15439 1325 aa11.71□□□□□ -0.53
FARP1-234ENST00000601361 EIF6P56537 245 aaKnown RBP11.71□□□□□ -0.53
FARP1-234ENST00000601361 CCDC30Q5VVM6 783 aa11.71□□□□□ -0.53
FARP1-234ENST00000601361 LARGE2Q8N3Y3 721 aa11.71□□□□□ -0.53
FARP1-234ENST00000601361 SNED1Q8TER0 1413 aa11.7□□□□□ -0.54
FARP1-234ENST00000601361 LAMB2P55268 1798 aa11.7□□□□□ -0.54
FARP1-234ENST00000601361 WDR33Q9C0J8 1336 aaKnown RBP11.7□□□□□ -0.54
FARP1-234ENST00000601361 ZNF541Q9H0D2 1346 aa11.7□□□□□ -0.54
FARP1-234ENST00000601361 DDX58O95786 925 aaKnown RBP11.7□□□□□ -0.54
FARP1-234ENST00000601361 RTL5Q5HYW3 569 aaPredicted RBP11.7□□□□□ -0.54
FARP1-234ENST00000601361 C8orf58Q8NAV2 365 aa11.7□□□□□ -0.54
FARP1-234ENST00000601361 TSR2Q969E8 191 aaKnown RBP11.7□□□□□ -0.54
FARP1-234ENST00000601361 FAM89AQ96GI7 184 aa11.7□□□□□ -0.54
FARP1-234ENST00000601361 STK31Q9BXU1 1019 aa11.7□□□□□ -0.54
FARP1-234ENST00000601361 SALL2Q9Y467 1007 aaPredicted RBP11.7□□□□□ -0.54
FARP1-234ENST00000601361 GJA3Q9Y6H8 435 aa11.7□□□□□ -0.54
FARP1-234ENST00000601361 COL4A5P29400 1685 aa11.7□□□□□ -0.54
FARP1-234ENST00000601361 BBOX1O75936 387 aa11.69□□□□□ -0.54
FARP1-234ENST00000601361 MAP2K1Q02750 393 aaPredicted RBP11.69□□□□□ -0.54
FARP1-234ENST00000601361 CCDC27Q2M243 656 aa11.69□□□□□ -0.54
FARP1-234ENST00000601361 EAPPQ56P03 285 aaPredicted RBP11.69□□□□□ -0.54
FARP1-234ENST00000601361 DPP8Q6V1X1 898 aaPredicted RBP11.69□□□□□ -0.54
FARP1-234ENST00000601361 NIM1KQ8IY84 436 aa11.69□□□□□ -0.54
FARP1-234ENST00000601361 SUPT20HQ8NEM7 779 aa11.69□□□□□ -0.54
FARP1-234ENST00000601361 PHAXQ9H814 394 aaKnown RBP11.69□□□□□ -0.54
FARP1-234ENST00000601361 CLEC11AQ9Y240 323 aa11.69□□□□□ -0.54
FARP1-234ENST00000601361 ATP6V0A2Q9Y487 856 aa11.69□□□□□ -0.54
FARP1-234ENST00000601361 POLR2AP24928 1970 aaKnown RBP11.68□□□□□ -0.54
FARP1-234ENST00000601361 AKAP11Q9UKA4 1901 aa11.68□□□□□ -0.54
FARP1-234ENST00000601361 PPIP5K2O43314 1243 aa11.68□□□□□ -0.54
FARP1-234ENST00000601361 HSP90B1P14625 803 aaKnown RBP11.68□□□□□ -0.54
FARP1-234ENST00000601361 GRAPQ13588 217 aa11.68□□□□□ -0.54
FARP1-234ENST00000601361 DEFB115Q30KQ5 88 aa11.68□□□□□ -0.54
FARP1-234ENST00000601361 WWC1Q8IX03 1113 aa11.68□□□□□ -0.54
FARP1-234ENST00000601361 GPC2Q8N158 579 aa11.68□□□□□ -0.54
FARP1-234ENST00000601361 GRAPLQ8TC17 118 aaPredicted RBP11.68□□□□□ -0.54
FARP1-234ENST00000601361 MYD88Q99836 296 aa11.68□□□□□ -0.54
FARP1-234ENST00000601361 ISCA1Q9BUE6 129 aa11.68□□□□□ -0.54
FARP1-234ENST00000601361 HACL1Q9UJ83 578 aa11.68□□□□□ -0.54
FARP1-234ENST00000601361 DDX60Q8IY21 1712 aaKnown RBP11.67□□□□□ -0.54
FARP1-234ENST00000601361 FZD9O00144 591 aa11.67□□□□□ -0.54
FARP1-234ENST00000601361 IRS4O14654 1257 aaPredicted RBP11.67□□□□□ -0.54
FARP1-234ENST00000601361 LMOD1P29536 600 aaPredicted RBP11.67□□□□□ -0.54
FARP1-234ENST00000601361 EPHX2P34913 555 aa11.67□□□□□ -0.54
FARP1-234ENST00000601361 TWISTNBQ3B726 338 aaPredicted RBP11.67□□□□□ -0.54
FARP1-234ENST00000601361 TMC4Q7Z404 712 aa11.67□□□□□ -0.54
FARP1-234ENST00000601361 SP8Q8IXZ3 490 aa11.67□□□□□ -0.54
FARP1-234ENST00000601361 FAM9BQ8IZU0 186 aa11.67□□□□□ -0.54
FARP1-234ENST00000601361 MPNDQ8N594 471 aa11.67□□□□□ -0.54
FARP1-234ENST00000601361 CCDC85CA6NKD9 419 aa11.66□□□□□ -0.54
FARP1-234ENST00000601361 NEXNQ0ZGT2 675 aa11.66□□□□□ -0.54
FARP1-234ENST00000601361 AOC3Q16853 763 aa11.66□□□□□ -0.54
FARP1-234ENST00000601361 MAP1SQ66K74 1059 aaPredicted RBP11.66□□□□□ -0.54
FARP1-234ENST00000601361 SLC51AQ86UW1 340 aa11.66□□□□□ -0.54
FARP1-234ENST00000601361 CNTROBQ8N137 903 aa11.66□□□□□ -0.54
FARP1-234ENST00000601361 TSPYL6Q8N831 410 aa11.66□□□□□ -0.54
FARP1-234ENST00000601361 CWC25Q9NXE8 425 aaPredicted RBP11.66□□□□□ -0.54
FARP1-234ENST00000601361 IL16Q14005 1332 aa11.65□□□□□ -0.54
FARP1-234ENST00000601361 TRIM28Q13263 835 aaKnown RBP11.65□□□□□ -0.54
FARP1-234ENST00000601361 PNMA8AQ86V59 439 aaPredicted RBP11.65□□□□□ -0.54
FARP1-234ENST00000601361 ZBTB38Q8NAP3 1195 aaPredicted RBP11.65□□□□□ -0.54
FARP1-234ENST00000601361 CCDC191Q8NCU4 936 aa11.65□□□□□ -0.54
FARP1-234ENST00000601361 MAP3K2Q9Y2U5 619 aa11.65□□□□□ -0.54
FARP1-234ENST00000601361 TAF1P21675 1872 aa11.64□□□□□ -0.55
FARP1-234ENST00000601361 CAPNS2Q96L46 248 aa11.64□□□□□ -0.55
FARP1-234ENST00000601361 METTL22Q9BUU2 404 aaPredicted RBP11.64□□□□□ -0.55
FARP1-234ENST00000601361 VPS33BQ9H267 617 aa11.64□□□□□ -0.55
FARP1-234ENST00000601361 ZNRF3Q9ULT6 936 aa11.64□□□□□ -0.55
FARP1-234ENST00000601361 NSFL1CQ9UNZ2 370 aaKnown RBP11.64□□□□□ -0.55
FARP1-234ENST00000601361 PI4KAP2A4QPH2 592 aa11.63□□□□□ -0.55
FARP1-234ENST00000601361 C6orf229H3BNL8 230 aa11.63□□□□□ -0.55
FARP1-234ENST00000601361 SLC4A2P04920 1241 aa11.63□□□□□ -0.55
FARP1-234ENST00000601361 SF3B3Q15393 1217 aaKnown RBP11.63□□□□□ -0.55
FARP1-234ENST00000601361 CCDC152Q4G0S7 254 aa11.63□□□□□ -0.55
FARP1-234ENST00000601361 KSR2Q6VAB6 950 aa11.63□□□□□ -0.55
FARP1-234ENST00000601361 WDR63Q8IWG1 891 aa11.63□□□□□ -0.55
FARP1-234ENST00000601361 PI4KAP1Q8N8J0 262 aa11.63□□□□□ -0.55
FARP1-234ENST00000601361 JARID2Q92833 1246 aaPredicted RBP11.63□□□□□ -0.55
FARP1-234ENST00000601361 CELF1Q92879 486 aaKnown RBP11.63□□□□□ -0.55
FARP1-234ENST00000601361 FANCIQ9NVI1 1328 aa11.62□□□□□ -0.55
FARP1-234ENST00000601361 G3V3G9 751 aa11.62□□□□□ -0.55
FARP1-234ENST00000601361 PDE8AO60658 829 aa11.62□□□□□ -0.55
FARP1-234ENST00000601361 PCCAP05165 728 aaPredicted RBP11.62□□□□□ -0.55
FARP1-234ENST00000601361 FMR1Q06787 632 aaKnown RBP eCLIP11.62□□□□□ -0.55
FARP1-234ENST00000601361 WASHC4Q2M389 1173 aa11.62□□□□□ -0.55
FARP1-234ENST00000601361 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
FARP1-234ENST00000601361 CCDC85AQ96PX6 553 aaPredicted RBP11.62□□□□□ -0.55
FARP1-234ENST00000601361 BCL2L13Q9BXK5 485 aa11.62□□□□□ -0.55
FARP1-234ENST00000601361 RTFDC1Q9BY42 306 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms