RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 TAF5LO75529 589 aa17.23■□□□□ 0.35
SMG9-211ENST00000601170 ATP5JP18859 108 aa17.23■□□□□ 0.35
SMG9-211ENST00000601170 TOB2Q14106 344 aaPredicted RBP17.23■□□□□ 0.35
SMG9-211ENST00000601170 GIMAP6Q6P9H5 292 aa17.23■□□□□ 0.35
SMG9-211ENST00000601170 CDC37L1Q7L3B6 337 aa17.23■□□□□ 0.35
SMG9-211ENST00000601170 FMNL2Q96PY5 1086 aa17.23■□□□□ 0.35
SMG9-211ENST00000601170 R3HCC1Q9Y3T6 440 aaKnown RBP17.23■□□□□ 0.35
SMG9-211ENST00000601170 RABL6Q3YEC7 729 aaPredicted RBP17.22■□□□□ 0.35
SMG9-211ENST00000601170 ATP5J2-PTCD1G3V325 749 aa17.22■□□□□ 0.35
SMG9-211ENST00000601170 PTCD1O75127 700 aaKnown RBP17.22■□□□□ 0.35
SMG9-211ENST00000601170 FERMT3Q86UX7 667 aa17.22■□□□□ 0.35
SMG9-211ENST00000601170 FUCA2Q9BTY2 467 aa17.22■□□□□ 0.35
SMG9-211ENST00000601170 ALDH8A1Q9H2A2 487 aaPredicted RBP17.22■□□□□ 0.35
SMG9-211ENST00000601170 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.22■□□□□ 0.35
SMG9-211ENST00000601170 NDUFB9Q9Y6M9 179 aa17.22■□□□□ 0.35
SMG9-211ENST00000601170 COL15A1P39059 1388 aa17.21■□□□□ 0.35
SMG9-211ENST00000601170 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.35
SMG9-211ENST00000601170 PDCP20941 246 aa17.21■□□□□ 0.35
SMG9-211ENST00000601170 TERF1P54274 439 aa17.21■□□□□ 0.35
SMG9-211ENST00000601170 HSP90AA2PQ14568 343 aaPredicted RBP17.21■□□□□ 0.35
SMG9-211ENST00000601170 TSGA10IPQ3SY00 556 aa17.21■□□□□ 0.35
SMG9-211ENST00000601170 CABLES1Q8TDN4 633 aa17.21■□□□□ 0.35
SMG9-211ENST00000601170 RRP9O43818 475 aaKnown RBP17.21■□□□□ 0.34
SMG9-211ENST00000601170 PDIA4P13667 645 aaKnown RBP17.21■□□□□ 0.34
SMG9-211ENST00000601170 KRT85P78386 507 aa17.21■□□□□ 0.34
SMG9-211ENST00000601170 CHRNA2Q15822 529 aa17.21■□□□□ 0.34
SMG9-211ENST00000601170 LAMB4A4D0S4 1761 aa17.2■□□□□ 0.34
SMG9-211ENST00000601170 A0A087WZG4 1122 aa17.2■□□□□ 0.34
SMG9-211ENST00000601170 USPL1Q5W0Q7 1092 aa17.2■□□□□ 0.34
SMG9-211ENST00000601170 TTC6Q86TZ1 520 aa17.2■□□□□ 0.34
SMG9-211ENST00000601170 GLI3P10071 1580 aa17.2■□□□□ 0.34
SMG9-211ENST00000601170 ADCY5O95622 1261 aa17.2■□□□□ 0.34
SMG9-211ENST00000601170 ATF3P18847 181 aa17.2■□□□□ 0.34
SMG9-211ENST00000601170 STK3Q13188 491 aa17.2■□□□□ 0.34
SMG9-211ENST00000601170 FAM173BQ6P4H8 233 aa17.2■□□□□ 0.34
SMG9-211ENST00000601170 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
SMG9-211ENST00000601170 DBNDD2Q9BQY9 259 aa17.2■□□□□ 0.34
SMG9-211ENST00000601170 ZNF609O15014 1411 aa17.19■□□□□ 0.34
SMG9-211ENST00000601170 CHGBP05060 677 aa17.19■□□□□ 0.34
SMG9-211ENST00000601170 KLHL34Q8N239 644 aa17.19■□□□□ 0.34
SMG9-211ENST00000601170 RFX7Q2KHR2 1363 aa17.19■□□□□ 0.34
SMG9-211ENST00000601170 CABP4P57796 275 aa17.18■□□□□ 0.34
SMG9-211ENST00000601170 KRT32Q14532 448 aa17.18■□□□□ 0.34
SMG9-211ENST00000601170 CCDC129Q6ZRS4 1044 aa17.18■□□□□ 0.34
SMG9-211ENST00000601170 MPNDQ8N594 471 aa17.18■□□□□ 0.34
SMG9-211ENST00000601170 CASP7P55210 303 aa17.18■□□□□ 0.34
SMG9-211ENST00000601170 KIAA2012Q0VF49 1180 aa17.18■□□□□ 0.34
SMG9-211ENST00000601170 SEC62Q99442 399 aaKnown RBP17.18■□□□□ 0.34
SMG9-211ENST00000601170 ELP1O95163 1332 aa17.18■□□□□ 0.34
SMG9-211ENST00000601170 PLEKHG2Q9H7P9 1386 aa17.17■□□□□ 0.34
SMG9-211ENST00000601170 PLBD2Q8NHP8 589 aa17.17■□□□□ 0.34
SMG9-211ENST00000601170 KDM4AO75164 1064 aa17.17■□□□□ 0.34
SMG9-211ENST00000601170 NEK1Q96PY6 1258 aa17.17■□□□□ 0.34
SMG9-211ENST00000601170 HAUS7Q99871 368 aa17.17■□□□□ 0.34
SMG9-211ENST00000601170 LMBR1LQ6UX01 489 aa17.16■□□□□ 0.34
SMG9-211ENST00000601170 DDX46Q7L014 1031 aaKnown RBP17.16■□□□□ 0.34
SMG9-211ENST00000601170 TMEM94Q12767 1356 aa17.16■□□□□ 0.34
SMG9-211ENST00000601170 MCMDC2Q4G0Z9 681 aa17.16■□□□□ 0.34
SMG9-211ENST00000601170 TNS3Q68CZ2 1445 aa17.16■□□□□ 0.34
SMG9-211ENST00000601170 ZNF830Q96NB3 372 aaPredicted RBP17.16■□□□□ 0.34
SMG9-211ENST00000601170 CHMP3Q9Y3E7 222 aa17.16■□□□□ 0.34
SMG9-211ENST00000601170 U3KPZ7 1027 aaPredicted RBP17.16■□□□□ 0.34
SMG9-211ENST00000601170 PARP4Q9UKK3 1724 aaKnown RBP17.15■□□□□ 0.34
SMG9-211ENST00000601170 CYP21A2P08686 494 aa17.15■□□□□ 0.34
SMG9-211ENST00000601170 GTF3C6Q969F1 213 aa17.15■□□□□ 0.34
SMG9-211ENST00000601170 CCDC192P0DO97 292 aa17.15■□□□□ 0.34
SMG9-211ENST00000601170 PRKCSHP14314 528 aaPredicted RBP17.15■□□□□ 0.34
SMG9-211ENST00000601170 LIG1P18858 919 aa17.15■□□□□ 0.34
SMG9-211ENST00000601170 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
SMG9-211ENST00000601170 JAK2O60674 1132 aa17.14■□□□□ 0.33
SMG9-211ENST00000601170 PLCB2Q00722 1185 aa17.14■□□□□ 0.33
SMG9-211ENST00000601170 Q6ZUG5 572 aa17.14■□□□□ 0.33
SMG9-211ENST00000601170 SCAND2PQ9GZW5 306 aaPredicted RBP17.14■□□□□ 0.33
SMG9-211ENST00000601170 FOXO4P98177 505 aa17.14■□□□□ 0.33
SMG9-211ENST00000601170 KBTBD3Q8NAB2 608 aa17.14■□□□□ 0.33
SMG9-211ENST00000601170 UBE2Q2Q8WVN8 375 aa17.14■□□□□ 0.33
SMG9-211ENST00000601170 SPATA32Q96LK8 384 aa17.14■□□□□ 0.33
SMG9-211ENST00000601170 NUP62CLQ9H1M0 184 aa17.14■□□□□ 0.33
SMG9-211ENST00000601170 UQCRHLA0A096LP55 91 aa17.13■□□□□ 0.33
SMG9-211ENST00000601170 NBPF26B4DH59 902 aa17.13■□□□□ 0.33
SMG9-211ENST00000601170 UQCRHP07919 91 aa17.13■□□□□ 0.33
SMG9-211ENST00000601170 NBPF14Q5TI25 921 aa17.13■□□□□ 0.33
SMG9-211ENST00000601170 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
SMG9-211ENST00000601170 NBPF15Q8N660 670 aa17.13■□□□□ 0.33
SMG9-211ENST00000601170 TTC12Q9H892 705 aaPredicted RBP17.13■□□□□ 0.33
SMG9-211ENST00000601170 TFIP11Q9UBB9 837 aaKnown RBP17.13■□□□□ 0.33
SMG9-211ENST00000601170 LAMA4Q16363 1823 aa17.13■□□□□ 0.33
SMG9-211ENST00000601170 NUP188Q5SRE5 1749 aa17.13■□□□□ 0.33
SMG9-211ENST00000601170 STRCP1A6NGW2 1772 aa17.13■□□□□ 0.33
SMG9-211ENST00000601170 H7C1W4 665 aa17.13■□□□□ 0.33
SMG9-211ENST00000601170 AP5Z1O43299 807 aa17.13■□□□□ 0.33
SMG9-211ENST00000601170 HSP90B1P14625 803 aaKnown RBP17.13■□□□□ 0.33
SMG9-211ENST00000601170 MAP3K11Q16584 847 aa17.13■□□□□ 0.33
SMG9-211ENST00000601170 SH3TC1Q8TE82 1336 aa17.12■□□□□ 0.33
SMG9-211ENST00000601170 DCCP43146 1447 aa17.12■□□□□ 0.33
SMG9-211ENST00000601170 TJP1Q07157 1748 aa17.12■□□□□ 0.33
SMG9-211ENST00000601170 CAMK4Q16566 473 aa17.12■□□□□ 0.33
SMG9-211ENST00000601170 ATG9AQ7Z3C6 839 aa17.12■□□□□ 0.33
SMG9-211ENST00000601170 LEO1Q8WVC0 666 aaPredicted RBP17.12■□□□□ 0.33
SMG9-211ENST00000601170 PIBF1Q8WXW3 757 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms