RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 KIAA2012Q0VF49 1180 aa22.1■■□□□ 1.13
USE1-208ENST00000600970 PROSER3Q2NL68 480 aa22.1■■□□□ 1.13
USE1-208ENST00000600970 MPNDQ8N594 471 aa22.1■■□□□ 1.13
USE1-208ENST00000600970 HHIPL1Q96JK4 782 aa22.1■■□□□ 1.13
USE1-208ENST00000600970 CDHR2Q9BYE9 1310 aa22.09■■□□□ 1.13
USE1-208ENST00000600970 RGS19P49795 217 aa22.09■■□□□ 1.13
USE1-208ENST00000600970 HIRAP54198 1017 aaPredicted RBP22.09■■□□□ 1.13
USE1-208ENST00000600970 BCL2L13Q9BXK5 485 aa22.09■■□□□ 1.13
USE1-208ENST00000600970 MAPK8IP3Q9UPT6 1336 aa22.08■■□□□ 1.13
USE1-208ENST00000600970 RAD17O75943 681 aa22.08■■□□□ 1.13
USE1-208ENST00000600970 HCLS1P14317 486 aaPredicted RBP22.08■■□□□ 1.13
USE1-208ENST00000600970 MLLT1Q03111 559 aaPredicted RBP22.08■■□□□ 1.13
USE1-208ENST00000600970 ZC3H15Q8WU90 426 aaKnown RBP22.08■■□□□ 1.13
USE1-208ENST00000600970 PNNQ9H307 717 aaKnown RBP22.08■■□□□ 1.13
USE1-208ENST00000600970 ZNF408Q9H9D4 720 aa22.08■■□□□ 1.13
USE1-208ENST00000600970 CA12O43570 354 aa22.07■■□□□ 1.12
USE1-208ENST00000600970 BRPF1P55201 1214 aaPredicted RBP22.07■■□□□ 1.12
USE1-208ENST00000600970 TNIP1Q15025 636 aa22.07■■□□□ 1.12
USE1-208ENST00000600970 NLRP10Q86W26 655 aa22.07■■□□□ 1.12
USE1-208ENST00000600970 TRPM4Q8TD43 1214 aa22.07■■□□□ 1.12
USE1-208ENST00000600970 CASP8AP2Q9UKL3 1982 aa22.07■■□□□ 1.12
USE1-208ENST00000600970 YDJCA8MPS7 323 aa22.06■■□□□ 1.12
USE1-208ENST00000600970 GRAPQ13588 217 aa22.06■■□□□ 1.12
USE1-208ENST00000600970 HSP90AB3PQ58FF7 597 aa22.06■■□□□ 1.12
USE1-208ENST00000600970 DDX46Q7L014 1031 aaKnown RBP22.06■■□□□ 1.12
USE1-208ENST00000600970 CDC37L1Q7L3B6 337 aa22.06■■□□□ 1.12
USE1-208ENST00000600970 GRAPLQ8TC17 118 aaPredicted RBP22.06■■□□□ 1.12
USE1-208ENST00000600970 CNOT7Q9UIV1 285 aaKnown RBP22.06■■□□□ 1.12
USE1-208ENST00000600970 DUOX1Q9NRD9 1551 aa22.06■■□□□ 1.12
USE1-208ENST00000600970 LRRC37AA6NMS7 1700 aa22.06■■□□□ 1.12
USE1-208ENST00000600970 SHTN1A0MZ66 631 aa22.05■■□□□ 1.12
USE1-208ENST00000600970 COPS6Q7L5N1 327 aa22.05■■□□□ 1.12
USE1-208ENST00000600970 MCOLN1Q9GZU1 580 aa22.05■■□□□ 1.12
USE1-208ENST00000600970 AIMP1Q12904 312 aaKnown RBP22.04■■□□□ 1.12
USE1-208ENST00000600970 TRMT112Q9UI30 125 aaKnown RBP22.04■■□□□ 1.12
USE1-208ENST00000600970 DDX60Q8IY21 1712 aaKnown RBP22.03■■□□□ 1.12
USE1-208ENST00000600970 TCIRG1Q13488 830 aa22.03■■□□□ 1.12
USE1-208ENST00000600970 XAGE3Q8WTP9 111 aa22.03■■□□□ 1.12
USE1-208ENST00000600970 NECTIN2Q92692 538 aa22.03■■□□□ 1.12
USE1-208ENST00000600970 BABAM1Q9NWV8 329 aa22.03■■□□□ 1.12
USE1-208ENST00000600970 SH3TC1Q8TE82 1336 aa22.03■■□□□ 1.12
USE1-208ENST00000600970 H7C1D1 291 aa22.02■■□□□ 1.12
USE1-208ENST00000600970 RIPK4P57078 832 aa22.02■■□□□ 1.12
USE1-208ENST00000600970 USP48Q86UV5 1035 aa22.02■■□□□ 1.12
USE1-208ENST00000600970 MICALL2Q8IY33 904 aa22.02■■□□□ 1.12
USE1-208ENST00000600970 TMC4Q7Z404 712 aa22.01■■□□□ 1.11
USE1-208ENST00000600970 ZIC5Q96T25 663 aa22.01■■□□□ 1.11
USE1-208ENST00000600970 ZBTB12Q9Y330 459 aaPredicted RBP22.01■■□□□ 1.11
USE1-208ENST00000600970 DLK2Q6UY11 383 aa22■■□□□ 1.11
USE1-208ENST00000600970 CFAP44Q96MT7 982 aa22■■□□□ 1.11
USE1-208ENST00000600970 HUNKP57058 714 aa21.99■■□□□ 1.11
USE1-208ENST00000600970 NOGQ13253 232 aa21.99■■□□□ 1.11
USE1-208ENST00000600970 DGKZQ13574 1117 aa21.99■■□□□ 1.11
USE1-208ENST00000600970 SAMD7Q7Z3H4 446 aa21.99■■□□□ 1.11
USE1-208ENST00000600970 DPF2Q92785 391 aa21.99■■□□□ 1.11
USE1-208ENST00000600970 POLR2AP24928 1970 aaKnown RBP21.99■■□□□ 1.11
USE1-208ENST00000600970 PSMD14O00487 310 aa21.98■■□□□ 1.11
USE1-208ENST00000600970 WASHC4Q2M389 1173 aa21.98■■□□□ 1.11
USE1-208ENST00000600970 ZNF428Q96B54 188 aa21.98■■□□□ 1.11
USE1-208ENST00000600970 DBNDD1Q9H9R9 158 aa21.97■■□□□ 1.11
USE1-208ENST00000600970 COL4A1P02462 1669 aa21.96■■□□□ 1.11
USE1-208ENST00000600970 EGFRP00533 1210 aa21.96■■□□□ 1.11
USE1-208ENST00000600970 TMPOP42166 694 aaKnown RBP21.96■■□□□ 1.11
USE1-208ENST00000600970 KRT24Q2M2I5 525 aa21.96■■□□□ 1.11
USE1-208ENST00000600970 TBC1D10BQ4KMP7 808 aaPredicted RBP21.96■■□□□ 1.11
USE1-208ENST00000600970 CELF1Q92879 486 aaKnown RBP21.96■■□□□ 1.11
USE1-208ENST00000600970 NSFL1CQ9UNZ2 370 aaKnown RBP21.96■■□□□ 1.11
USE1-208ENST00000600970 FAM155AB1AL88 458 aaPredicted RBP21.95■■□□□ 1.1
USE1-208ENST00000600970 RIMBP2O15034 1052 aa21.95■■□□□ 1.1
USE1-208ENST00000600970 LMOD3Q0VAK6 560 aa21.95■■□□□ 1.1
USE1-208ENST00000600970 KRT26Q7Z3Y9 468 aa21.95■■□□□ 1.1
USE1-208ENST00000600970 SF3B3Q15393 1217 aaKnown RBP21.94■■□□□ 1.1
USE1-208ENST00000600970 RGMBQ6NW40 437 aa21.94■■□□□ 1.1
USE1-208ENST00000600970 FAM89AQ96GI7 184 aa21.94■■□□□ 1.1
USE1-208ENST00000600970 CHPF2Q9P2E5 772 aa21.94■■□□□ 1.1
USE1-208ENST00000600970 POLLQ9UGP5 575 aa21.94■■□□□ 1.1
USE1-208ENST00000600970 C6orf229H3BNL8 230 aa21.93■■□□□ 1.1
USE1-208ENST00000600970 GPSM2P81274 684 aa21.93■■□□□ 1.1
USE1-208ENST00000600970 PLBD2Q8NHP8 589 aa21.93■■□□□ 1.1
USE1-208ENST00000600970 ISCA1Q9BUE6 129 aa21.93■■□□□ 1.1
USE1-208ENST00000600970 GBA2Q9HCG7 927 aaPredicted RBP21.93■■□□□ 1.1
USE1-208ENST00000600970 KCNQ5Q9NR82 932 aa21.93■■□□□ 1.1
USE1-208ENST00000600970 ADM5C9JUS6 153 aa21.92■■□□□ 1.1
USE1-208ENST00000600970 ECE2O60344 883 aa21.92■■□□□ 1.1
USE1-208ENST00000600970 RPS12P25398 132 aaKnown RBP21.92■■□□□ 1.1
USE1-208ENST00000600970 RBM26Q5T8P6 1007 aaKnown RBP21.92■■□□□ 1.1
USE1-208ENST00000600970 C2orf69Q8N8R5 385 aa21.92■■□□□ 1.1
USE1-208ENST00000600970 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
USE1-208ENST00000600970 CHL1O00533 1208 aa21.91■■□□□ 1.1
USE1-208ENST00000600970 DOK7Q18PE1 504 aa21.91■■□□□ 1.1
USE1-208ENST00000600970 ANKRD13DQ6ZTN6 518 aa21.91■■□□□ 1.1
USE1-208ENST00000600970 DCPSQ96C86 337 aaKnown RBP21.91■■□□□ 1.1
USE1-208ENST00000600970 ATP5J2-PTCD1G3V325 749 aa21.9■■□□□ 1.1
USE1-208ENST00000600970 KIF23Q02241 960 aaPredicted RBP21.9■■□□□ 1.1
USE1-208ENST00000600970 CCDC102AQ96A19 550 aa21.9■■□□□ 1.1
USE1-208ENST00000600970 EYA3Q99504 573 aa21.9■■□□□ 1.1
USE1-208ENST00000600970 SAGE1Q9NXZ1 904 aa21.9■■□□□ 1.1
USE1-208ENST00000600970 SCN9AQ15858 1988 aa21.9■■□□□ 1.1
USE1-208ENST00000600970 AKAP11Q9UKA4 1901 aa21.9■■□□□ 1.1
USE1-208ENST00000600970 ZNF157P51786 506 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms