RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 MTX1Q13505 466 aa25.55■■□□□ 1.68
PNKP-215ENST00000600910 PNMA6EA0A0J9YXQ4 647 aa25.54■■□□□ 1.68
PNKP-215ENST00000600910 SIRT2Q8IXJ6 389 aa25.54■■□□□ 1.68
PNKP-215ENST00000600910 SRGAP3O43295 1099 aa25.53■■□□□ 1.68
PNKP-215ENST00000600910 SF3B3Q15393 1217 aaKnown RBP25.53■■□□□ 1.68
PNKP-215ENST00000600910 C10orf71Q711Q0 1435 aa25.53■■□□□ 1.68
PNKP-215ENST00000600910 FAM161AQ3B820 660 aa25.52■■□□□ 1.68
PNKP-215ENST00000600910 CCDC152Q4G0S7 254 aa25.52■■□□□ 1.68
PNKP-215ENST00000600910 GREM2Q9H772 168 aa25.52■■□□□ 1.68
PNKP-215ENST00000600910 PDE6BP35913 854 aa25.51■■□□□ 1.67
PNKP-215ENST00000600910 KLRG2A4D1S0 409 aaPredicted RBP25.5■■□□□ 1.67
PNKP-215ENST00000600910 CRY2Q49AN0 593 aa25.5■■□□□ 1.67
PNKP-215ENST00000600910 SSH3Q8TE77 659 aa25.5■■□□□ 1.67
PNKP-215ENST00000600910 GTF3C3Q9Y5Q9 886 aa25.5■■□□□ 1.67
PNKP-215ENST00000600910 ITGA6P23229 1130 aa25.49■■□□□ 1.67
PNKP-215ENST00000600910 CCDC57Q2TAC2 916 aa25.49■■□□□ 1.67
PNKP-215ENST00000600910 RTL9Q8NET4 1388 aa25.49■■□□□ 1.67
PNKP-215ENST00000600910 HMMRO75330 724 aa25.48■■□□□ 1.67
PNKP-215ENST00000600910 IFIT5Q13325 482 aaKnown RBP25.48■■□□□ 1.67
PNKP-215ENST00000600910 POLA2Q14181 598 aa25.48■■□□□ 1.67
PNKP-215ENST00000600910 SEC31BQ9NQW1 1179 aa25.48■■□□□ 1.67
PNKP-215ENST00000600910 KIF13BQ9NQT8 1826 aa25.47■■□□□ 1.67
PNKP-215ENST00000600910 RFX5P48382 616 aaPredicted RBP25.47■■□□□ 1.67
PNKP-215ENST00000600910 RPGRQ92834 1020 aaKnown RBP25.47■■□□□ 1.67
PNKP-215ENST00000600910 PPP4R2Q9NY27 417 aa25.47■■□□□ 1.67
PNKP-215ENST00000600910 ANKRD18BA2A2Z9 1011 aa25.46■■□□□ 1.67
PNKP-215ENST00000600910 HDAC1Q13547 482 aaPredicted RBP25.46■■□□□ 1.67
PNKP-215ENST00000600910 KLHDC4Q8TBB5 520 aa25.46■■□□□ 1.67
PNKP-215ENST00000600910 COL11A2P13942 1736 aaPredicted RBP25.46■■□□□ 1.67
PNKP-215ENST00000600910 SRGNP10124 158 aa25.45■■□□□ 1.67
PNKP-215ENST00000600910 DDX46Q7L014 1031 aaKnown RBP25.45■■□□□ 1.67
PNKP-215ENST00000600910 PTPN12Q05209 780 aaKnown RBP25.45■■□□□ 1.66
PNKP-215ENST00000600910 C2CD5Q86YS7 1000 aa25.45■■□□□ 1.66
PNKP-215ENST00000600910 ZNF594Q96JF6 807 aaPredicted RBP25.45■■□□□ 1.66
PNKP-215ENST00000600910 RWDD1Q9H446 243 aaPredicted RBP25.45■■□□□ 1.66
PNKP-215ENST00000600910 PPP1R1BQ9UD71 204 aaPredicted RBP25.45■■□□□ 1.66
PNKP-215ENST00000600910 PA2G4Q9UQ80 394 aaKnown RBP25.45■■□□□ 1.66
PNKP-215ENST00000600910 H0YIN7 160 aa25.44■■□□□ 1.66
PNKP-215ENST00000600910 IGHDP01880 384 aa25.44■■□□□ 1.66
PNKP-215ENST00000600910 TAF7LQ5H9L4 462 aa25.44■■□□□ 1.66
PNKP-215ENST00000600910 KLHL34Q8N239 644 aa25.44■■□□□ 1.66
PNKP-215ENST00000600910 CCDC136Q96JN2 1154 aa25.44■■□□□ 1.66
PNKP-215ENST00000600910 COL4A1P02462 1669 aa25.43■■□□□ 1.66
PNKP-215ENST00000600910 NPR1P16066 1061 aa25.43■■□□□ 1.66
PNKP-215ENST00000600910 CHRNA5P30532 468 aa25.43■■□□□ 1.66
PNKP-215ENST00000600910 RBM17Q96I25 401 aaKnown RBP25.43■■□□□ 1.66
PNKP-215ENST00000600910 PDZRN3Q9UPQ7 1066 aa25.43■■□□□ 1.66
PNKP-215ENST00000600910 TAF1P21675 1872 aa25.43■■□□□ 1.66
PNKP-215ENST00000600910 HOXA10P31260 410 aaPredicted RBP25.42■■□□□ 1.66
PNKP-215ENST00000600910 CDC5LQ99459 802 aaKnown RBP25.42■■□□□ 1.66
PNKP-215ENST00000600910 COPRSQ9NQ92 184 aa25.42■■□□□ 1.66
PNKP-215ENST00000600910 B4GALNT3Q6L9W6 998 aa25.41■■□□□ 1.66
PNKP-215ENST00000600910 CELF1Q92879 486 aaKnown RBP25.41■■□□□ 1.66
PNKP-215ENST00000600910 MASTLQ96GX5 879 aa25.41■■□□□ 1.66
PNKP-215ENST00000600910 CD2APQ9Y5K6 639 aa25.41■■□□□ 1.66
PNKP-215ENST00000600910 SIL1Q9H173 461 aa25.41■■□□□ 1.66
PNKP-215ENST00000600910 SURF6O75683 361 aaKnown RBP25.4■■□□□ 1.66
PNKP-215ENST00000600910 TGFB2P61812 414 aa25.4■■□□□ 1.66
PNKP-215ENST00000600910 GRAPQ13588 217 aa25.4■■□□□ 1.66
PNKP-215ENST00000600910 ANKRD18AQ8IVF6 992 aa25.4■■□□□ 1.66
PNKP-215ENST00000600910 GRAPLQ8TC17 118 aaPredicted RBP25.4■■□□□ 1.66
PNKP-215ENST00000600910 ZNF622Q969S3 477 aaKnown RBP eCLIP25.4■■□□□ 1.66
PNKP-215ENST00000600910 CRAMP1Q96RY5 1269 aa25.4■■□□□ 1.66
PNKP-215ENST00000600910 IGHMBP2P38935 993 aaKnown RBP25.39■■□□□ 1.66
PNKP-215ENST00000600910 EXOC6BQ9Y2D4 811 aa25.39■■□□□ 1.66
PNKP-215ENST00000600910 SRCAPQ6ZRS2 3230 aa25.39■■□□□ 1.65
PNKP-215ENST00000600910 KIAA1551Q9HCM1 1747 aa25.38■■□□□ 1.65
PNKP-215ENST00000600910 A0A0G2JLW4 131 aa25.38■■□□□ 1.65
PNKP-215ENST00000600910 DPEP1P16444 411 aa25.38■■□□□ 1.65
PNKP-215ENST00000600910 RPS8P62241 208 aaKnown RBP25.38■■□□□ 1.65
PNKP-215ENST00000600910 STYK1Q6J9G0 422 aa25.38■■□□□ 1.65
PNKP-215ENST00000600910 DCTPP1Q9H773 170 aa25.38■■□□□ 1.65
PNKP-215ENST00000600910 NOP58Q9Y2X3 529 aaKnown RBP25.38■■□□□ 1.65
PNKP-215ENST00000600910 SPEF2Q9C093 1822 aa25.38■■□□□ 1.65
PNKP-215ENST00000600910 LRP5O75197 1615 aa25.38■■□□□ 1.65
PNKP-215ENST00000600910 LDHAL6AQ6ZMR3 332 aa25.37■■□□□ 1.65
PNKP-215ENST00000600910 MPHOSPH8Q99549 860 aa25.37■■□□□ 1.65
PNKP-215ENST00000600910 PUS3Q9BZE2 481 aaKnown RBP25.37■■□□□ 1.65
PNKP-215ENST00000600910 DLEC1Q9Y238 1755 aa25.37■■□□□ 1.65
PNKP-215ENST00000600910 ALDH1B1P30837 517 aa25.37■■□□□ 1.65
PNKP-215ENST00000600910 LRRC24Q50LG9 513 aa25.37■■□□□ 1.65
PNKP-215ENST00000600910 EYA2O00167 538 aa25.36■■□□□ 1.65
PNKP-215ENST00000600910 KCNA3P22001 575 aa25.36■■□□□ 1.65
PNKP-215ENST00000600910 G3BP1Q13283 466 aaKnown RBP eCLIP25.36■■□□□ 1.65
PNKP-215ENST00000600910 CNNM1Q9NRU3 951 aa25.36■■□□□ 1.65
PNKP-215ENST00000600910 GCC1Q96CN9 775 aa25.35■■□□□ 1.65
PNKP-215ENST00000600910 BSDC1Q9NW68 430 aaPredicted RBP25.35■■□□□ 1.65
PNKP-215ENST00000600910 FBXO3Q9UK99 471 aa25.35■■□□□ 1.65
PNKP-215ENST00000600910 CIAO1O76071 339 aa25.34■■□□□ 1.65
PNKP-215ENST00000600910 OS9Q13438 667 aaPredicted RBP25.34■■□□□ 1.65
PNKP-215ENST00000600910 HSP90AB4PQ58FF6 505 aa25.34■■□□□ 1.65
PNKP-215ENST00000600910 ATG9AQ7Z3C6 839 aa25.34■■□□□ 1.65
PNKP-215ENST00000600910 FHDC1Q9C0D6 1143 aaPredicted RBP25.34■■□□□ 1.65
PNKP-215ENST00000600910 KDM2BQ8NHM5 1336 aa25.34■■□□□ 1.65
PNKP-215ENST00000600910 APBB1O00213 710 aa25.34■■□□□ 1.65
PNKP-215ENST00000600910 BBOX1O75936 387 aa25.34■■□□□ 1.65
PNKP-215ENST00000600910 SMC5Q8IY18 1101 aa25.34■■□□□ 1.65
PNKP-215ENST00000600910 CNKSR1Q969H4 720 aa25.34■■□□□ 1.65
PNKP-215ENST00000600910 RIPOR2Q9Y4F9 1068 aa25.34■■□□□ 1.65
PNKP-215ENST00000600910 CACNA1SQ13698 1873 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms