RNA–Protein interactions for RNA: ENST00000600898.1

USF2-214, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-214ENST00000600898 SLC10A5Q5PT55 438 aa19.14■□□□□ 0.65
USF2-214ENST00000600898 NLGN1Q8N2Q7 840 aa19.14■□□□□ 0.65
USF2-214ENST00000600898 ZNF594Q96JF6 807 aaPredicted RBP19.14■□□□□ 0.65
USF2-214ENST00000600898 RWDD1Q9H446 243 aaPredicted RBP19.14■□□□□ 0.65
USF2-214ENST00000600898 SPON1Q9HCB6 807 aa19.14■□□□□ 0.65
USF2-214ENST00000600898 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.14■□□□□ 0.65
USF2-214ENST00000600898 ANKRD31Q8N7Z5 1873 aa19.14■□□□□ 0.65
USF2-214ENST00000600898 PDE8AO60658 829 aa19.13■□□□□ 0.65
USF2-214ENST00000600898 GREM2Q9H772 168 aa19.13■□□□□ 0.65
USF2-214ENST00000600898 DCTPP1Q9H773 170 aa19.13■□□□□ 0.65
USF2-214ENST00000600898 ZBTB7AO95365 584 aa19.12■□□□□ 0.65
USF2-214ENST00000600898 SLC51AQ86UW1 340 aa19.12■□□□□ 0.65
USF2-214ENST00000600898 SMC5Q8IY18 1101 aa19.12■□□□□ 0.65
USF2-214ENST00000600898 SEC31BQ9NQW1 1179 aa19.12■□□□□ 0.65
USF2-214ENST00000600898 EXOC6BQ9Y2D4 811 aa19.12■□□□□ 0.65
USF2-214ENST00000600898 PTPN12Q05209 780 aaKnown RBP19.11■□□□□ 0.65
USF2-214ENST00000600898 TPTE2Q6XPS3 522 aa19.11■□□□□ 0.65
USF2-214ENST00000600898 CHMP3Q9Y3E7 222 aa19.11■□□□□ 0.65
USF2-214ENST00000600898 SMARCA5O60264 1052 aaPredicted RBP19.1■□□□□ 0.65
USF2-214ENST00000600898 CENPQQ7L2Z9 268 aaPredicted RBP19.1■□□□□ 0.65
USF2-214ENST00000600898 CNBD1Q8NA66 436 aa19.1■□□□□ 0.65
USF2-214ENST00000600898 PUS3Q9BZE2 481 aaKnown RBP19.1■□□□□ 0.65
USF2-214ENST00000600898 NYXQ9GZU5 481 aa19.1■□□□□ 0.65
USF2-214ENST00000600898 PDZRN3Q9UPQ7 1066 aa19.1■□□□□ 0.65
USF2-214ENST00000600898 ATF5Q9Y2D1 282 aaPredicted RBP19.1■□□□□ 0.65
USF2-214ENST00000600898 APBB1O00213 710 aa19.09■□□□□ 0.65
USF2-214ENST00000600898 GTF2E1P29083 439 aaPredicted RBP19.09■□□□□ 0.65
USF2-214ENST00000600898 DCAF8L1A6NGE4 600 aa19.08■□□□□ 0.64
USF2-214ENST00000600898 SIL1Q9H173 461 aa19.08■□□□□ 0.64
USF2-214ENST00000600898 SPEF2Q9C093 1822 aa19.07■□□□□ 0.64
USF2-214ENST00000600898 HMMRO75330 724 aa19.07■□□□□ 0.64
USF2-214ENST00000600898 SURF6O75683 361 aaKnown RBP19.07■□□□□ 0.64
USF2-214ENST00000600898 ITGA6P23229 1130 aa19.07■□□□□ 0.64
USF2-214ENST00000600898 PDE4AP27815 886 aa19.07■□□□□ 0.64
USF2-214ENST00000600898 SF3B3Q15393 1217 aaKnown RBP19.07■□□□□ 0.64
USF2-214ENST00000600898 LRRC24Q50LG9 513 aa19.07■□□□□ 0.64
USF2-214ENST00000600898 HDAC5Q9UQL6 1122 aa19.07■□□□□ 0.64
USF2-214ENST00000600898 NOP58Q9Y2X3 529 aaKnown RBP19.07■□□□□ 0.64
USF2-214ENST00000600898 PARP3Q9Y6F1 533 aa19.07■□□□□ 0.64
USF2-214ENST00000600898 SASH1O94885 1247 aa19.06■□□□□ 0.64
USF2-214ENST00000600898 ATG9AQ7Z3C6 839 aa19.06■□□□□ 0.64
USF2-214ENST00000600898 COPRSQ9NQ92 184 aa19.06■□□□□ 0.64
USF2-214ENST00000600898 COL11A2P13942 1736 aaPredicted RBP19.05■□□□□ 0.64
USF2-214ENST00000600898 C16orf71Q8IYS4 520 aaPredicted RBP19.05■□□□□ 0.64
USF2-214ENST00000600898 SLC16A10Q8TF71 515 aa19.05■□□□□ 0.64
USF2-214ENST00000600898 NUCB1Q02818 461 aa19.04■□□□□ 0.64
USF2-214ENST00000600898 RIC1Q4ADV7 1423 aa19.04■□□□□ 0.64
USF2-214ENST00000600898 ANKRD45Q5TZF3 282 aa19.04■□□□□ 0.64
USF2-214ENST00000600898 OTUD7AQ8TE49 926 aaPredicted RBP19.04■□□□□ 0.64
USF2-214ENST00000600898 CELF1Q92879 486 aaKnown RBP19.04■□□□□ 0.64
USF2-214ENST00000600898 BCL11AQ9H165 835 aa19.04■□□□□ 0.64
USF2-214ENST00000600898 NPHP1O15259 732 aa19.03■□□□□ 0.64
USF2-214ENST00000600898 IFIT5Q13325 482 aaKnown RBP19.03■□□□□ 0.64
USF2-214ENST00000600898 GCC1Q96CN9 775 aa19.03■□□□□ 0.64
USF2-214ENST00000600898 NLRP3Q96P20 1036 aa19.03■□□□□ 0.64
USF2-214ENST00000600898 SGIP1Q9BQI5 828 aa19.03■□□□□ 0.64
USF2-214ENST00000600898 LNPKQ9C0E8 428 aa19.03■□□□□ 0.64
USF2-214ENST00000600898 RTL9Q8NET4 1388 aa19.03■□□□□ 0.64
USF2-214ENST00000600898 KLRG2A4D1S0 409 aaPredicted RBP19.02■□□□□ 0.64
USF2-214ENST00000600898 ST5P78524 1137 aa19.02■□□□□ 0.64
USF2-214ENST00000600898 CCDC57Q2TAC2 916 aa19.02■□□□□ 0.64
USF2-214ENST00000600898 CCDC152Q4G0S7 254 aa19.02■□□□□ 0.64
USF2-214ENST00000600898 IL1RAPL2Q9NP60 686 aa19.02■□□□□ 0.64
USF2-214ENST00000600898 ANKRD18BA2A2Z9 1011 aa19.01■□□□□ 0.63
USF2-214ENST00000600898 PTGER2P43116 358 aa19.01■□□□□ 0.63
USF2-214ENST00000600898 CRY2Q49AN0 593 aa19.01■□□□□ 0.63
USF2-214ENST00000600898 CHD1LQ86WJ1 897 aa19.01■□□□□ 0.63
USF2-214ENST00000600898 RHPN1Q8TCX5 695 aa19.01■□□□□ 0.63
USF2-214ENST00000600898 MTFR1LQ9H019 292 aa19.01■□□□□ 0.63
USF2-214ENST00000600898 WTIPA6NIX2 430 aaPredicted RBP19■□□□□ 0.63
USF2-214ENST00000600898 EYA2O00167 538 aa19■□□□□ 0.63
USF2-214ENST00000600898 TFCP2Q12800 502 aa19■□□□□ 0.63
USF2-214ENST00000600898 BRIP1Q9BX63 1249 aa19■□□□□ 0.63
USF2-214ENST00000600898 RIPOR2Q9Y4F9 1068 aa19■□□□□ 0.63
USF2-214ENST00000600898 C10orf71Q711Q0 1435 aa19■□□□□ 0.63
USF2-214ENST00000600898 CHRNA5P30532 468 aa18.99■□□□□ 0.63
USF2-214ENST00000600898 G3BP1Q13283 466 aaKnown RBP eCLIP18.99■□□□□ 0.63
USF2-214ENST00000600898 A0A1B0GUL6 1792 aa18.98■□□□□ 0.63
USF2-214ENST00000600898 KIAA1551Q9HCM1 1747 aa18.98■□□□□ 0.63
USF2-214ENST00000600898 SNAP23O00161 211 aa18.98■□□□□ 0.63
USF2-214ENST00000600898 OS9Q13438 667 aaPredicted RBP18.98■□□□□ 0.63
USF2-214ENST00000600898 HELBQ8NG08 1087 aaPredicted RBP18.98■□□□□ 0.63
USF2-214ENST00000600898 RAB11FIP3O75154 756 aa18.97■□□□□ 0.63
USF2-214ENST00000600898 LDHAL6AQ6ZMR3 332 aa18.97■□□□□ 0.63
USF2-214ENST00000600898 LRRCC1Q9C099 1032 aa18.97■□□□□ 0.63
USF2-214ENST00000600898 KIF13BQ9NQT8 1826 aa18.96■□□□□ 0.63
USF2-214ENST00000600898 CIAO1O76071 339 aa18.96■□□□□ 0.63
USF2-214ENST00000600898 SRGNP10124 158 aa18.96■□□□□ 0.63
USF2-214ENST00000600898 HSP90B1P14625 803 aaKnown RBP18.96■□□□□ 0.63
USF2-214ENST00000600898 HOXA10P31260 410 aaPredicted RBP18.96■□□□□ 0.63
USF2-214ENST00000600898 RGS3P49796 1198 aa18.96■□□□□ 0.63
USF2-214ENST00000600898 TAF7LQ5H9L4 462 aa18.96■□□□□ 0.63
USF2-214ENST00000600898 VGLL2Q8N8G2 317 aa18.96■□□□□ 0.63
USF2-214ENST00000600898 EAF2Q96CJ1 260 aaPredicted RBP18.96■□□□□ 0.63
USF2-214ENST00000600898 TLR7Q9NYK1 1049 aaKnown RBP18.96■□□□□ 0.63
USF2-214ENST00000600898 SALL3Q9BXA9 1300 aa18.96■□□□□ 0.63
USF2-214ENST00000600898 RPS8P62241 208 aaKnown RBP18.95■□□□□ 0.62
USF2-214ENST00000600898 TSHZ3Q63HK5 1081 aa18.95■□□□□ 0.62
USF2-214ENST00000600898 C2CD5Q86YS7 1000 aa18.95■□□□□ 0.62
USF2-214ENST00000600898 KIF1BPQ96EK5 621 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms