RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 IARSP41252 1262 aaKnown RBP13.39□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 PDIA6Q15084 440 aa13.39□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 NFE2L2Q16236 605 aa13.39□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 SUSD4Q5VX71 490 aa13.39□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 ZBTB3Q9H5J0 574 aa13.39□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 RRP7AQ9Y3A4 280 aaKnown RBP13.39□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 IBTKQ9P2D0 1353 aaPredicted RBP13.39□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 PRUNE2Q8WUY3 3088 aa13.38□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 H0YGN5 161 aa13.38□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 ANXA1P04083 346 aa13.38□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 PROSER3Q2NL68 480 aa13.38□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 FBXO46Q6PJ61 603 aaPredicted RBP13.38□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 ZNF34Q8IZ26 560 aa13.38□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 RBM27Q9P2N5 1060 aaKnown RBP13.38□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 DUOX1Q9NRD9 1551 aa13.37□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 PIEZO1Q92508 2521 aa13.37□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 LRRC37AA6NMS7 1700 aa13.37□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 HOXA10P31260 410 aaPredicted RBP13.36□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 RTKN2Q8IZC4 609 aa13.36□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 PSMD1Q99460 953 aa13.36□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 FAM155AB1AL88 458 aaPredicted RBP13.35□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 ALDH1B1P30837 517 aa13.35□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 SCNN1DP51172 638 aa13.35□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 HDAC9Q9UKV0 1011 aa13.35□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 KRT24Q2M2I5 525 aa13.34□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 GIGYF2Q6Y7W6 1299 aaKnown RBP13.34□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 GPC2Q8N158 579 aa13.34□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 PNISRQ8TF01 805 aaKnown RBP13.34□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 RAPGEFL1Q9UHV5 662 aa13.34□□□□□ -0.27
MIA-RAB4B-201ENST00000600729 TCERG1O14776 1098 aaKnown RBP13.33□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 GTF2E1P29083 439 aaPredicted RBP13.33□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 EPS15P42566 896 aa13.33□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 KIF23Q02241 960 aaPredicted RBP13.33□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 KIF6Q6ZMV9 814 aa13.33□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 NYXQ9GZU5 481 aa13.33□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 PPEF1O14829 653 aaPredicted RBP13.32□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 LMOD1P29536 600 aaPredicted RBP13.32□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 PIAS4Q8N2W9 510 aaPredicted RBP13.32□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 ZNF428Q96B54 188 aa13.32□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 FAM122AQ96E09 287 aa13.32□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 CRAMP1Q96RY5 1269 aa13.32□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 ZNF408Q9H9D4 720 aa13.32□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 TSPYL4Q9UJ04 414 aa13.32□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 ABCC4O15439 1325 aa13.32□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 ERBB4Q15303 1308 aa13.32□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 EIF2S2P20042 333 aaKnown RBP13.31□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 HUNKP57058 714 aa13.31□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.31□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 ZNF296Q8WUU4 475 aaPredicted RBP13.31□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 RPGRQ92834 1020 aaKnown RBP13.31□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 GJA3Q9Y6H8 435 aa13.31□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 AOC3Q16853 763 aa13.3□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 USP50Q70EL3 339 aaPredicted RBP13.3□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 GLIS2Q9BZE0 524 aaPredicted RBP13.3□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 MAPK8IP3Q9UPT6 1336 aa13.3□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 POLR2AP24928 1970 aaKnown RBP13.29□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 SCN9AQ15858 1988 aa13.29□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 SOX1O00570 391 aaPredicted RBP13.29□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 EN2P19622 333 aaPredicted RBP13.29□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 TMPOP42166 694 aaKnown RBP13.29□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 RIPK4P57078 832 aa13.29□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 SLC10A5Q5PT55 438 aa13.29□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 INTS3Q68E01 1043 aaKnown RBP13.29□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 CC2D2BQ6DHV5 1058 aa13.29□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 JDP2Q8WYK2 163 aa13.29□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 SNX27Q96L92 541 aa13.29□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 HCLS1P14317 486 aaPredicted RBP13.28□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 EIF6P56537 245 aaKnown RBP13.28□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 PARP10Q53GL7 1025 aa13.28□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 NLRP10Q86W26 655 aa13.28□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 CCDC146Q8IYE0 955 aa13.28□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 XAGE3Q8WTP9 111 aa13.28□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 RBM17Q96I25 401 aaKnown RBP13.28□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 LRCH3Q96II8 777 aa13.28□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 STXBP5LQ9Y2K9 1186 aa13.28□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 ATP6V0A2Q9Y487 856 aa13.28□□□□□ -0.28
MIA-RAB4B-201ENST00000600729 SHTN1A0MZ66 631 aa13.27□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 PPIP5K2O43314 1243 aa13.27□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 NEFMP07197 916 aa13.27□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 RGMBQ6NW40 437 aa13.27□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 COPS6Q7L5N1 327 aa13.27□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 CSRNP1Q96S65 589 aa13.27□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 UTP14AQ9BVJ6 771 aaKnown RBP13.27□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 RTFDC1Q9BY42 306 aaPredicted RBP13.27□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 TRIM35Q9UPQ4 493 aa13.27□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 CXCL9Q07325 125 aa13.26□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 AIMP1Q12904 312 aaKnown RBP13.26□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 PPP1R42Q7Z4L9 355 aa13.26□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 CCDC102AQ96A19 550 aa13.26□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 PRO3102Q9H379 93 aa13.26□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 ZNF646O15015 1829 aaPredicted RBP13.25□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 PSME4Q14997 1843 aa13.25□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 YDJCA8MPS7 323 aa13.25□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 CHL1O00533 1208 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms