RNA–Protein interactions for RNA: ENST00000600386.5

SOX2-OT-232, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 792 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-232ENST00000600386 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
SOX2-OT-232ENST00000600386 COL4A1P02462 1669 aa17.23■□□□□ 0.35
SOX2-OT-232ENST00000600386 BCAR3O75815 825 aa17.22■□□□□ 0.35
SOX2-OT-232ENST00000600386 CTSWP56202 376 aa17.22■□□□□ 0.35
SOX2-OT-232ENST00000600386 GRAPQ13588 217 aa17.22■□□□□ 0.35
SOX2-OT-232ENST00000600386 C9orf131Q5VYM1 1079 aa17.22■□□□□ 0.35
SOX2-OT-232ENST00000600386 GRAPLQ8TC17 118 aaPredicted RBP17.22■□□□□ 0.35
SOX2-OT-232ENST00000600386 LTBP3Q9NS15 1303 aa17.21■□□□□ 0.35
SOX2-OT-232ENST00000600386 CACNA1SQ13698 1873 aa17.21■□□□□ 0.35
SOX2-OT-232ENST00000600386 CELF1Q92879 486 aaKnown RBP17.21■□□□□ 0.35
SOX2-OT-232ENST00000600386 CCDC85AQ96PX6 553 aaPredicted RBP17.21■□□□□ 0.35
SOX2-OT-232ENST00000600386 KIF16BQ96L93 1317 aa17.21■□□□□ 0.34
SOX2-OT-232ENST00000600386 GRM8O00222 908 aa17.2■□□□□ 0.34
SOX2-OT-232ENST00000600386 BBOX1O75936 387 aa17.2■□□□□ 0.34
SOX2-OT-232ENST00000600386 LMNB1P20700 586 aa17.2■□□□□ 0.34
SOX2-OT-232ENST00000600386 CCDC152Q4G0S7 254 aa17.2■□□□□ 0.34
SOX2-OT-232ENST00000600386 TTLL11Q8NHH1 800 aa17.2■□□□□ 0.34
SOX2-OT-232ENST00000600386 PLA2G12BQ9BX93 195 aa17.2■□□□□ 0.34
SOX2-OT-232ENST00000600386 TAOK3Q9H2K8 898 aa17.2■□□□□ 0.34
SOX2-OT-232ENST00000600386 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
SOX2-OT-232ENST00000600386 RNF181Q9P0P0 153 aa17.2■□□□□ 0.34
SOX2-OT-232ENST00000600386 ATP6V0A2Q9Y487 856 aa17.2■□□□□ 0.34
SOX2-OT-232ENST00000600386 RTKN2Q8IZC4 609 aa17.19■□□□□ 0.34
SOX2-OT-232ENST00000600386 CHD4Q14839 1912 aa17.19■□□□□ 0.34
SOX2-OT-232ENST00000600386 FKBP4Q02790 459 aaKnown RBP eCLIP17.18■□□□□ 0.34
SOX2-OT-232ENST00000600386 CC2D2BQ6DHV5 1058 aa17.18■□□□□ 0.34
SOX2-OT-232ENST00000600386 ZNF784Q8NCA9 323 aaPredicted RBP17.18■□□□□ 0.34
SOX2-OT-232ENST00000600386 ARHGAP45Q92619 1136 aa17.18■□□□□ 0.34
SOX2-OT-232ENST00000600386 API5Q9BZZ5 524 aaKnown RBP17.18■□□□□ 0.34
SOX2-OT-232ENST00000600386 GREM2Q9H772 168 aa17.18■□□□□ 0.34
SOX2-OT-232ENST00000600386 C9orf78Q9NZ63 289 aaPredicted RBP17.18■□□□□ 0.34
SOX2-OT-232ENST00000600386 UTYO14607 1347 aa17.18■□□□□ 0.34
SOX2-OT-232ENST00000600386 RTL9Q8NET4 1388 aa17.17■□□□□ 0.34
SOX2-OT-232ENST00000600386 NBPF7P0C2Y1 421 aaPredicted RBP17.17■□□□□ 0.34
SOX2-OT-232ENST00000600386 FOXO4P98177 505 aa17.17■□□□□ 0.34
SOX2-OT-232ENST00000600386 FER1L6Q2WGJ9 1857 aa17.17■□□□□ 0.34
SOX2-OT-232ENST00000600386 SP8Q8IXZ3 490 aa17.17■□□□□ 0.34
SOX2-OT-232ENST00000600386 CSF1RP07333 972 aa17.16■□□□□ 0.34
SOX2-OT-232ENST00000600386 TRIM27P14373 513 aa17.16■□□□□ 0.34
SOX2-OT-232ENST00000600386 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
SOX2-OT-232ENST00000600386 EPHA10Q5JZY3 1008 aa17.16■□□□□ 0.34
SOX2-OT-232ENST00000600386 TMC4Q7Z404 712 aa17.16■□□□□ 0.34
SOX2-OT-232ENST00000600386 FRAT1Q92837 279 aaPredicted RBP17.16■□□□□ 0.34
SOX2-OT-232ENST00000600386 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
SOX2-OT-232ENST00000600386 PSMD1Q99460 953 aa17.16■□□□□ 0.34
SOX2-OT-232ENST00000600386 ZNF277Q9NRM2 450 aaPredicted RBP17.16■□□□□ 0.34
SOX2-OT-232ENST00000600386 TNNQ9UQP3 1299 aa17.16■□□□□ 0.34
SOX2-OT-232ENST00000600386 CCT4P50991 539 aaKnown RBP17.15■□□□□ 0.34
SOX2-OT-232ENST00000600386 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
SOX2-OT-232ENST00000600386 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
SOX2-OT-232ENST00000600386 KAZALD1Q96I82 304 aa17.15■□□□□ 0.34
SOX2-OT-232ENST00000600386 USP44Q9H0E7 712 aa17.15■□□□□ 0.34
SOX2-OT-232ENST00000600386 IPO8O15397 1037 aaKnown RBP17.14■□□□□ 0.33
SOX2-OT-232ENST00000600386 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
SOX2-OT-232ENST00000600386 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
SOX2-OT-232ENST00000600386 LRRC37AA6NMS7 1700 aa17.13■□□□□ 0.33
SOX2-OT-232ENST00000600386 ITGA6P23229 1130 aa17.13■□□□□ 0.33
SOX2-OT-232ENST00000600386 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
SOX2-OT-232ENST00000600386 CDC5LQ99459 802 aaKnown RBP17.13■□□□□ 0.33
SOX2-OT-232ENST00000600386 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
SOX2-OT-232ENST00000600386 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
SOX2-OT-232ENST00000600386 TAF1P21675 1872 aa17.13■□□□□ 0.33
SOX2-OT-232ENST00000600386 DUOX1Q9NRD9 1551 aa17.12■□□□□ 0.33
SOX2-OT-232ENST00000600386 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
SOX2-OT-232ENST00000600386 ZKSCAN2Q63HK3 967 aa17.12■□□□□ 0.33
SOX2-OT-232ENST00000600386 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
SOX2-OT-232ENST00000600386 DPP8Q6V1X1 898 aaPredicted RBP17.12■□□□□ 0.33
SOX2-OT-232ENST00000600386 MPNDQ8N594 471 aa17.12■□□□□ 0.33
SOX2-OT-232ENST00000600386 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
SOX2-OT-232ENST00000600386 SBF1O95248 1867 aa17.12■□□□□ 0.33
SOX2-OT-232ENST00000600386 COL4A5P29400 1685 aa17.11■□□□□ 0.33
SOX2-OT-232ENST00000600386 GPSM2P81274 684 aa17.11■□□□□ 0.33
SOX2-OT-232ENST00000600386 INTS3Q68E01 1043 aaKnown RBP17.11■□□□□ 0.33
SOX2-OT-232ENST00000600386 ZNF526Q8TF50 670 aaPredicted RBP17.11■□□□□ 0.33
SOX2-OT-232ENST00000600386 CLUAP1Q96AJ1 413 aa17.11■□□□□ 0.33
SOX2-OT-232ENST00000600386 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
SOX2-OT-232ENST00000600386 ANKRD44Q8N8A2 993 aa17.1■□□□□ 0.33
SOX2-OT-232ENST00000600386 NSFL1CQ9UNZ2 370 aaKnown RBP17.1■□□□□ 0.33
SOX2-OT-232ENST00000600386 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
SOX2-OT-232ENST00000600386 TIAM2Q8IVF5 1701 aa17.1■□□□□ 0.33
SOX2-OT-232ENST00000600386 RABL6Q3YEC7 729 aaPredicted RBP17.09■□□□□ 0.33
SOX2-OT-232ENST00000600386 MEIS3Q99687 375 aa17.09■□□□□ 0.33
SOX2-OT-232ENST00000600386 BSDC1Q9NW68 430 aaPredicted RBP17.09■□□□□ 0.33
SOX2-OT-232ENST00000600386 LTBP1Q14766 1721 aa17.09■□□□□ 0.33
SOX2-OT-232ENST00000600386 MYH3P11055 1940 aa17.08■□□□□ 0.33
SOX2-OT-232ENST00000600386 ANKRD18BA2A2Z9 1011 aa17.08■□□□□ 0.32
SOX2-OT-232ENST00000600386 IGHMBP2P38935 993 aaKnown RBP17.08■□□□□ 0.32
SOX2-OT-232ENST00000600386 IFIT5Q13325 482 aaKnown RBP17.08■□□□□ 0.32
SOX2-OT-232ENST00000600386 AOC3Q16853 763 aa17.08■□□□□ 0.32
SOX2-OT-232ENST00000600386 TMEM57Q8N5G2 664 aa17.08■□□□□ 0.32
SOX2-OT-232ENST00000600386 SUPT20HQ8NEM7 779 aa17.08■□□□□ 0.32
SOX2-OT-232ENST00000600386 PODXL2Q9NZ53 605 aa17.08■□□□□ 0.32
SOX2-OT-232ENST00000600386 POLLQ9UGP5 575 aa17.08■□□□□ 0.32
SOX2-OT-232ENST00000600386 RCAN3Q9UKA8 241 aa17.08■□□□□ 0.32
SOX2-OT-232ENST00000600386 MINPP1Q9UNW1 487 aa17.08■□□□□ 0.32
SOX2-OT-232ENST00000600386 PPIP5K2O43314 1243 aa17.07■□□□□ 0.32
SOX2-OT-232ENST00000600386 UBTFL1P0CB47 393 aaPredicted RBP17.07■□□□□ 0.32
SOX2-OT-232ENST00000600386 RLBP1P12271 317 aa17.07■□□□□ 0.32
SOX2-OT-232ENST00000600386 CCDC57Q2TAC2 916 aa17.07■□□□□ 0.32
SOX2-OT-232ENST00000600386 LARGE2Q8N3Y3 721 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms