RNA–Protein interactions for RNA: ENST00000600020.5

USP29-203, Transcript of ubiquitin specific peptidase 29, humanhuman

TSL 3

Gene USP29, Length 437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-203ENST00000600020 PPP1R42Q7Z4L9 355 aa9.36□□□□□ -0.91
USP29-203ENST00000600020 TRMT2AQ8IZ69 625 aaKnown RBP9.36□□□□□ -0.91
USP29-203ENST00000600020 C8orf58Q8NAV2 365 aa9.36□□□□□ -0.91
USP29-203ENST00000600020 PLBD2Q8NHP8 589 aa9.36□□□□□ -0.91
USP29-203ENST00000600020 NECTIN2Q92692 538 aa9.36□□□□□ -0.91
USP29-203ENST00000600020 RNF39Q9H2S5 420 aa9.36□□□□□ -0.91
USP29-203ENST00000600020 GJA3Q9Y6H8 435 aa9.36□□□□□ -0.91
USP29-203ENST00000600020 HOXD11P31277 338 aaPredicted RBP9.35□□□□□ -0.91
USP29-203ENST00000600020 SCNN1DP51172 638 aa9.35□□□□□ -0.91
USP29-203ENST00000600020 ANKRD13DQ6ZTN6 518 aa9.35□□□□□ -0.91
USP29-203ENST00000600020 NLRP10Q86W26 655 aa9.35□□□□□ -0.91
USP29-203ENST00000600020 CNTROBQ8N137 903 aa9.35□□□□□ -0.91
USP29-203ENST00000600020 GPC2Q8N158 579 aa9.35□□□□□ -0.91
USP29-203ENST00000600020 RPGRQ92834 1020 aaKnown RBP9.35□□□□□ -0.91
USP29-203ENST00000600020 ZNF428Q96B54 188 aa9.35□□□□□ -0.91
USP29-203ENST00000600020 PSMD1Q99460 953 aa9.35□□□□□ -0.91
USP29-203ENST00000600020 PSME4Q14997 1843 aa9.35□□□□□ -0.91
USP29-203ENST00000600020 PPEF1O14829 653 aaPredicted RBP9.34□□□□□ -0.91
USP29-203ENST00000600020 EPS15P42566 896 aa9.34□□□□□ -0.91
USP29-203ENST00000600020 AIMP1Q12904 312 aaKnown RBP9.34□□□□□ -0.91
USP29-203ENST00000600020 TRIM28Q13263 835 aaKnown RBP9.34□□□□□ -0.91
USP29-203ENST00000600020 TSPYL6Q8N831 410 aa9.34□□□□□ -0.91
USP29-203ENST00000600020 ISCA1Q9BUE6 129 aa9.34□□□□□ -0.91
USP29-203ENST00000600020 UTP14AQ9BVJ6 771 aaKnown RBP9.34□□□□□ -0.91
USP29-203ENST00000600020 CHMP4AQ9BY43 222 aa9.34□□□□□ -0.91
USP29-203ENST00000600020 ABCC4O15439 1325 aa9.33□□□□□ -0.92
USP29-203ENST00000600020 A0A1B0GUL6 1792 aa9.33□□□□□ -0.92
USP29-203ENST00000600020 TRAF5O00463 557 aa9.33□□□□□ -0.92
USP29-203ENST00000600020 ELL2O00472 640 aaPredicted RBP9.33□□□□□ -0.92
USP29-203ENST00000600020 CCDC30Q5VVM6 783 aa9.33□□□□□ -0.92
USP29-203ENST00000600020 LARGE2Q8N3Y3 721 aa9.33□□□□□ -0.92
USP29-203ENST00000600020 JDP2Q8WYK2 163 aa9.33□□□□□ -0.92
USP29-203ENST00000600020 TSR2Q969E8 191 aaKnown RBP9.33□□□□□ -0.92
USP29-203ENST00000600020 CRAMP1Q96RY5 1269 aa9.33□□□□□ -0.92
USP29-203ENST00000600020 MYH16Q9H6N6 1097 aa9.33□□□□□ -0.92
USP29-203ENST00000600020 PHAXQ9H814 394 aaKnown RBP9.33□□□□□ -0.92
USP29-203ENST00000600020 SPINK5Q9NQ38 1064 aaPredicted RBP9.33□□□□□ -0.92
USP29-203ENST00000600020 SUPT16HQ9Y5B9 1047 aaKnown RBP9.33□□□□□ -0.92
USP29-203ENST00000600020 GTF3C3Q9Y5Q9 886 aa9.33□□□□□ -0.92
USP29-203ENST00000600020 COL4A1P02462 1669 aa9.32□□□□□ -0.92
USP29-203ENST00000600020 RASSF10A6NK89 507 aa9.32□□□□□ -0.92
USP29-203ENST00000600020 LBX1P52954 281 aa9.32□□□□□ -0.92
USP29-203ENST00000600020 EIF6P56537 245 aaKnown RBP9.32□□□□□ -0.92
USP29-203ENST00000600020 AOC3Q16853 763 aa9.32□□□□□ -0.92
USP29-203ENST00000600020 PNMA8AQ86V59 439 aaPredicted RBP9.32□□□□□ -0.92
USP29-203ENST00000600020 RBM17Q96I25 401 aaKnown RBP9.32□□□□□ -0.92
USP29-203ENST00000600020 NLRP3Q96P20 1036 aa9.32□□□□□ -0.92
USP29-203ENST00000600020 WBP1LQ9NX94 342 aa9.32□□□□□ -0.92
USP29-203ENST00000600020 ABT1Q9ULW3 272 aaKnown RBP9.32□□□□□ -0.92
USP29-203ENST00000600020 SH3TC1Q8TE82 1336 aa9.31□□□□□ -0.92
USP29-203ENST00000600020 WDR33Q9C0J8 1336 aaKnown RBP9.31□□□□□ -0.92
USP29-203ENST00000600020 PPIP5K2O43314 1243 aa9.31□□□□□ -0.92
USP29-203ENST00000600020 NEFLP07196 543 aa9.31□□□□□ -0.92
USP29-203ENST00000600020 HSPA8P11142 646 aaKnown RBP9.31□□□□□ -0.92
USP29-203ENST00000600020 HCLS1P14317 486 aaPredicted RBP9.31□□□□□ -0.92
USP29-203ENST00000600020 CTCFP49711 727 aaPredicted RBP9.31□□□□□ -0.92
USP29-203ENST00000600020 DEFB115Q30KQ5 88 aa9.31□□□□□ -0.92
USP29-203ENST00000600020 TWISTNBQ3B726 338 aaPredicted RBP9.31□□□□□ -0.92
USP29-203ENST00000600020 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
USP29-203ENST00000600020 CC2D2BQ6DHV5 1058 aa9.31□□□□□ -0.92
USP29-203ENST00000600020 NIM1KQ8IY84 436 aa9.31□□□□□ -0.92
USP29-203ENST00000600020 AIDAQ96BJ3 306 aa9.31□□□□□ -0.92
USP29-203ENST00000600020 RCAN3Q9UKA8 241 aa9.31□□□□□ -0.92
USP29-203ENST00000600020 POLR2AP24928 1970 aaKnown RBP9.31□□□□□ -0.92
USP29-203ENST00000600020 ZNF646O15015 1829 aaPredicted RBP9.31□□□□□ -0.92
USP29-203ENST00000600020 THSD7BQ9C0I4 1608 aa9.31□□□□□ -0.92
USP29-203ENST00000600020 FANCIQ9NVI1 1328 aa9.31□□□□□ -0.92
USP29-203ENST00000600020 DUOX1Q9NRD9 1551 aa9.3□□□□□ -0.92
USP29-203ENST00000600020 SHTN1A0MZ66 631 aa9.3□□□□□ -0.92
USP29-203ENST00000600020 VAMP4O75379 141 aa9.3□□□□□ -0.92
USP29-203ENST00000600020 LMOD1P29536 600 aaPredicted RBP9.3□□□□□ -0.92
USP29-203ENST00000600020 GRM1Q13255 1194 aa9.3□□□□□ -0.92
USP29-203ENST00000600020 CST9Q5W186 159 aa9.3□□□□□ -0.92
USP29-203ENST00000600020 CYP4F22Q6NT55 531 aa9.3□□□□□ -0.92
USP29-203ENST00000600020 PRDM10Q9NQV6 1147 aa9.3□□□□□ -0.92
USP29-203ENST00000600020 TRMT112Q9UI30 125 aaKnown RBP9.3□□□□□ -0.92
USP29-203ENST00000600020 ATP6V0A2Q9Y487 856 aa9.3□□□□□ -0.92
USP29-203ENST00000600020 TRPM7Q96QT4 1865 aa9.3□□□□□ -0.92
USP29-203ENST00000600020 ATP5J2-PTCD1G3V325 749 aa9.29□□□□□ -0.92
USP29-203ENST00000600020 CXCL9Q07325 125 aa9.29□□□□□ -0.92
USP29-203ENST00000600020 SF3B3Q15393 1217 aaKnown RBP9.29□□□□□ -0.92
USP29-203ENST00000600020 KSR2Q6VAB6 950 aa9.29□□□□□ -0.92
USP29-203ENST00000600020 PAXIP1Q6ZW49 1069 aaPredicted RBP9.29□□□□□ -0.92
USP29-203ENST00000600020 RIC3Q7Z5B4 369 aa9.29□□□□□ -0.92
USP29-203ENST00000600020 CCDC191Q8NCU4 936 aa9.29□□□□□ -0.92
USP29-203ENST00000600020 FAM89AQ96GI7 184 aa9.29□□□□□ -0.92
USP29-203ENST00000600020 METTL22Q9BUU2 404 aaPredicted RBP9.29□□□□□ -0.92
USP29-203ENST00000600020 TSKSQ9UJT2 592 aa9.29□□□□□ -0.92
USP29-203ENST00000600020 SCN9AQ15858 1988 aa9.29□□□□□ -0.92
USP29-203ENST00000600020 TNRC18O15417 2968 aaPredicted RBP9.29□□□□□ -0.92
USP29-203ENST00000600020 AOC2O75106 756 aa9.28□□□□□ -0.92
USP29-203ENST00000600020 BBOX1O75936 387 aa9.28□□□□□ -0.92
USP29-203ENST00000600020 RAD17O75943 681 aa9.28□□□□□ -0.92
USP29-203ENST00000600020 CT47B1P0C2W7 299 aaPredicted RBP9.28□□□□□ -0.92
USP29-203ENST00000600020 GMPSP49915 693 aaPredicted RBP9.28□□□□□ -0.92
USP29-203ENST00000600020 DLK2Q6UY11 383 aa9.28□□□□□ -0.92
USP29-203ENST00000600020 G2E3Q7L622 706 aa9.28□□□□□ -0.92
USP29-203ENST00000600020 SP8Q8IXZ3 490 aa9.28□□□□□ -0.92
USP29-203ENST00000600020 ZBTB38Q8NAP3 1195 aaPredicted RBP9.28□□□□□ -0.92
USP29-203ENST00000600020 TRPM4Q8TD43 1214 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms