RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 RBM8AQ9Y5S9 174 aaKnown RBP17.25■□□□□ 0.35
SYMPK-213ENST00000599460 ARHGEF25Q86VW2 580 aa17.25■□□□□ 0.35
SYMPK-213ENST00000599460 GJB2P29033 226 aa17.25■□□□□ 0.35
SYMPK-213ENST00000599460 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
SYMPK-213ENST00000599460 TMEM132AQ24JP5 1023 aa17.24■□□□□ 0.35
SYMPK-213ENST00000599460 NAA16Q6N069 864 aaPredicted RBP17.24■□□□□ 0.35
SYMPK-213ENST00000599460 DACH1Q9UI36 760 aa17.24■□□□□ 0.35
SYMPK-213ENST00000599460 USP16Q9Y5T5 823 aa17.24■□□□□ 0.35
SYMPK-213ENST00000599460 PARP10Q53GL7 1025 aa17.24■□□□□ 0.35
SYMPK-213ENST00000599460 RAB11FIP4Q86YS3 637 aa17.24■□□□□ 0.35
SYMPK-213ENST00000599460 F8W031 263 aaPredicted RBP17.24■□□□□ 0.35
SYMPK-213ENST00000599460 SSFA2P28290 1259 aa17.24■□□□□ 0.35
SYMPK-213ENST00000599460 R3HCC1Q9Y3T6 440 aaKnown RBP17.24■□□□□ 0.35
SYMPK-213ENST00000599460 NSFL1CQ9UNZ2 370 aaKnown RBP17.24■□□□□ 0.35
SYMPK-213ENST00000599460 SSBP05455 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
SYMPK-213ENST00000599460 NAP1L1P55209 391 aaKnown RBP17.23■□□□□ 0.35
SYMPK-213ENST00000599460 HCLS1P14317 486 aaPredicted RBP17.23■□□□□ 0.35
SYMPK-213ENST00000599460 ITGA6P23229 1130 aa17.23■□□□□ 0.35
SYMPK-213ENST00000599460 MCM5P33992 734 aa17.23■□□□□ 0.35
SYMPK-213ENST00000599460 MICU3Q86XE3 530 aa17.23■□□□□ 0.35
SYMPK-213ENST00000599460 ZNF335Q9H4Z2 1342 aaPredicted RBP17.23■□□□□ 0.35
SYMPK-213ENST00000599460 HLA-DOAP06340 250 aa17.23■□□□□ 0.35
SYMPK-213ENST00000599460 OFD1O75665 1012 aa17.23■□□□□ 0.35
SYMPK-213ENST00000599460 STIM1Q13586 685 aa17.23■□□□□ 0.35
SYMPK-213ENST00000599460 CEP57L1Q8IYX8 460 aa17.22■□□□□ 0.35
SYMPK-213ENST00000599460 SH3TC1Q8TE82 1336 aa17.22■□□□□ 0.35
SYMPK-213ENST00000599460 KAT14Q9H8E8 782 aa17.22■□□□□ 0.35
SYMPK-213ENST00000599460 RNF113AO15541 343 aaKnown RBP17.22■□□□□ 0.35
SYMPK-213ENST00000599460 SERPINC1P01008 464 aa17.22■□□□□ 0.35
SYMPK-213ENST00000599460 C8orf34Q49A92 452 aa17.22■□□□□ 0.35
SYMPK-213ENST00000599460 KLHDC4Q8TBB5 520 aa17.22■□□□□ 0.35
SYMPK-213ENST00000599460 ANKRD2Q9GZV1 360 aa17.22■□□□□ 0.35
SYMPK-213ENST00000599460 METAP2P50579 478 aaKnown RBP eCLIP17.22■□□□□ 0.354e-7■■■□□ 15.1
SYMPK-213ENST00000599460 CNBD1Q8NA66 436 aa17.22■□□□□ 0.35
SYMPK-213ENST00000599460 GIGYF1O75420 1035 aaPredicted RBP17.22■□□□□ 0.35
SYMPK-213ENST00000599460 NBPF7P0C2Y1 421 aaPredicted RBP17.22■□□□□ 0.35
SYMPK-213ENST00000599460 CCDC70Q6NSX1 233 aa17.22■□□□□ 0.35
SYMPK-213ENST00000599460 SCAND2PQ9GZW5 306 aaPredicted RBP17.22■□□□□ 0.35
SYMPK-213ENST00000599460 CEP152O94986 1710 aa17.21■□□□□ 0.35
SYMPK-213ENST00000599460 BRF1Q92994 677 aa17.21■□□□□ 0.35
SYMPK-213ENST00000599460 SUCLG2Q96I99 432 aa17.21■□□□□ 0.35
SYMPK-213ENST00000599460 EYA2O00167 538 aa17.21■□□□□ 0.35
SYMPK-213ENST00000599460 PPFIA3O75145 1194 aa17.21■□□□□ 0.35
SYMPK-213ENST00000599460 IARSP41252 1262 aaKnown RBP17.21■□□□□ 0.35
SYMPK-213ENST00000599460 RIMBP3CA6NJZ7 1639 aa17.21■□□□□ 0.35
SYMPK-213ENST00000599460 RIMBP3BA6NNM3 1639 aa17.21■□□□□ 0.35
SYMPK-213ENST00000599460 RIMBP3Q9UFD9 1639 aa17.21■□□□□ 0.35
SYMPK-213ENST00000599460 RTL1A6NKG5 1358 aa17.21■□□□□ 0.35
SYMPK-213ENST00000599460 TRPM1Q7Z4N2 1603 aa17.21■□□□□ 0.35
SYMPK-213ENST00000599460 NLRP5P59047 1200 aa17.21■□□□□ 0.35
SYMPK-213ENST00000599460 CAMK4Q16566 473 aa17.21■□□□□ 0.35
SYMPK-213ENST00000599460 PDE8AO60658 829 aa17.21■□□□□ 0.34
SYMPK-213ENST00000599460 GCKRQ14397 625 aa17.21■□□□□ 0.34
SYMPK-213ENST00000599460 LRRC2Q9BYS8 371 aa17.21■□□□□ 0.34
SYMPK-213ENST00000599460 TCEANC2Q96MN5 208 aa17.2■□□□□ 0.34
SYMPK-213ENST00000599460 KRT23Q9C075 422 aa17.2■□□□□ 0.34
SYMPK-213ENST00000599460 BMP2KQ9NSY1 1161 aaPredicted RBP17.2■□□□□ 0.34
SYMPK-213ENST00000599460 IGSF1Q8N6C5 1336 aa17.2■□□□□ 0.34
SYMPK-213ENST00000599460 TNPO1Q92973 898 aaKnown RBP17.2■□□□□ 0.34
SYMPK-213ENST00000599460 KIF5BP33176 963 aa17.2■□□□□ 0.34
SYMPK-213ENST00000599460 NBPF14Q5TI25 921 aa17.2■□□□□ 0.34
SYMPK-213ENST00000599460 MAGEB6P1A0A0J9YX57 407 aa17.2■□□□□ 0.34
SYMPK-213ENST00000599460 SPC24Q8NBT2 197 aa17.2■□□□□ 0.34
SYMPK-213ENST00000599460 ZC3H12CQ9C0D7 883 aaKnown RBP17.2■□□□□ 0.34
SYMPK-213ENST00000599460 LRRIQ1Q96JM4 1722 aa17.2■□□□□ 0.34
SYMPK-213ENST00000599460 ALKQ9UM73 1620 aa17.2■□□□□ 0.34
SYMPK-213ENST00000599460 MAGEB6Q8N7X4 407 aa17.19■□□□□ 0.34
SYMPK-213ENST00000599460 GOLGA6L1Q8N7Z2 621 aa17.19■□□□□ 0.34
SYMPK-213ENST00000599460 RBM17Q96I25 401 aaKnown RBP17.19■□□□□ 0.34
SYMPK-213ENST00000599460 ZNF594Q96JF6 807 aaPredicted RBP17.19■□□□□ 0.34
SYMPK-213ENST00000599460 TMX3Q96JJ7 454 aa17.19■□□□□ 0.34
SYMPK-213ENST00000599460 STX6O43752 255 aa17.19■□□□□ 0.34
SYMPK-213ENST00000599460 ANAPC15P60006 121 aa17.19■□□□□ 0.34
SYMPK-213ENST00000599460 MYO1BO43795 1136 aa17.19■□□□□ 0.34
SYMPK-213ENST00000599460 TIMM10P62072 90 aa17.19■□□□□ 0.34
SYMPK-213ENST00000599460 TTLL12Q14166 644 aaPredicted RBP17.19■□□□□ 0.34
SYMPK-213ENST00000599460 CABP5Q9NP86 173 aa17.19■□□□□ 0.34
SYMPK-213ENST00000599460 ORC3Q9UBD5 711 aaPredicted RBP17.19■□□□□ 0.34
SYMPK-213ENST00000599460 KLF18A0A0U1RQI7 1052 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 WTAPQ15007 396 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 PNMA6EA0A0J9YXQ4 647 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 A0A1B0GUL7 405 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 RIMBP2O15034 1052 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 TNNI3KQ59H18 835 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 VSIG10Q8N0Z9 540 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 NECAB1Q8N987 351 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 FPGT-TNNI3KV9GXZ4 949 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 GLI2P10070 1586 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 MAP3K11Q16584 847 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 DNAJC5Q9H3Z4 198 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 VAT1LQ9HCJ6 419 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 WWC3Q9ULE0 1092 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 MIGA1Q8NAN2 632 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
SYMPK-213ENST00000599460 CNNM2Q9H8M5 875 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 CHMLP26374 656 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 CCDC173Q0VFZ6 552 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 PICALMQ13492 652 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 SLC26A6Q9BXS9 759 aa17.18■□□□□ 0.34
SYMPK-213ENST00000599460 E9PCH4 1651 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms