RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 PARP4Q9UKK3 1724 aaKnown RBP23.45■■□□□ 1.34
GRAMD1A-207ENST00000598118 FIBPO43427 364 aa23.44■■□□□ 1.34
GRAMD1A-207ENST00000598118 PSMA5P28066 241 aa23.44■■□□□ 1.34
GRAMD1A-207ENST00000598118 DNM1Q05193 864 aaKnown RBP23.44■■□□□ 1.34
GRAMD1A-207ENST00000598118 LMBR1LQ6UX01 489 aa23.44■■□□□ 1.34
GRAMD1A-207ENST00000598118 RNF20Q5VTR2 975 aa23.43■■□□□ 1.34
GRAMD1A-207ENST00000598118 BLOC1S2Q6QNY1 142 aa23.43■■□□□ 1.34
GRAMD1A-207ENST00000598118 RPS6KB1P23443 525 aa23.42■■□□□ 1.34
GRAMD1A-207ENST00000598118 UBE2HP62256 183 aa23.42■■□□□ 1.34
GRAMD1A-207ENST00000598118 FOXO4P98177 505 aa23.42■■□□□ 1.34
GRAMD1A-207ENST00000598118 TOB2Q14106 344 aaPredicted RBP23.42■■□□□ 1.34
GRAMD1A-207ENST00000598118 HS1BP3Q53T59 392 aa23.42■■□□□ 1.34
GRAMD1A-207ENST00000598118 TTLL7Q6ZT98 887 aa23.42■■□□□ 1.34
GRAMD1A-207ENST00000598118 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.42■■□□□ 1.34
GRAMD1A-207ENST00000598118 ATP6V1DQ9Y5K8 247 aa23.42■■□□□ 1.34
GRAMD1A-207ENST00000598118 XIRP1Q702N8 1843 aaKnown RBP23.41■■□□□ 1.34
GRAMD1A-207ENST00000598118 VPS37CA5D8V6 355 aaPredicted RBP23.41■■□□□ 1.34
GRAMD1A-207ENST00000598118 SEC62Q99442 399 aaKnown RBP23.41■■□□□ 1.34
GRAMD1A-207ENST00000598118 DNAJC2Q99543 621 aaKnown RBP23.41■■□□□ 1.34
GRAMD1A-207ENST00000598118 ZNF609O15014 1411 aa23.41■■□□□ 1.34
GRAMD1A-207ENST00000598118 H7C1W4 665 aa23.4■■□□□ 1.34
GRAMD1A-207ENST00000598118 PHF14O94880 888 aa23.4■■□□□ 1.34
GRAMD1A-207ENST00000598118 TSGA10IPQ3SY00 556 aa23.4■■□□□ 1.34
GRAMD1A-207ENST00000598118 USPL1Q5W0Q7 1092 aa23.4■■□□□ 1.34
GRAMD1A-207ENST00000598118 CCDC129Q6ZRS4 1044 aa23.4■■□□□ 1.34
GRAMD1A-207ENST00000598118 CCDC183Q5T5S1 534 aa23.4■■□□□ 1.34
GRAMD1A-207ENST00000598118 NOL7Q9UMY1 257 aaKnown RBP23.4■■□□□ 1.34
GRAMD1A-207ENST00000598118 NUP188Q5SRE5 1749 aa23.4■■□□□ 1.34
GRAMD1A-207ENST00000598118 UBR2Q8IWV8 1755 aa23.39■■□□□ 1.34
GRAMD1A-207ENST00000598118 A1BGP04217 495 aa23.39■■□□□ 1.34
GRAMD1A-207ENST00000598118 CCDC9Q9Y3X0 531 aaKnown RBP23.39■■□□□ 1.34
GRAMD1A-207ENST00000598118 MSNP26038 577 aaKnown RBP23.39■■□□□ 1.33
GRAMD1A-207ENST00000598118 BRINP3Q76B58 766 aa23.39■■□□□ 1.33
GRAMD1A-207ENST00000598118 ZCRB1Q8TBF4 217 aaKnown RBP23.39■■□□□ 1.33
GRAMD1A-207ENST00000598118 HAUS7Q99871 368 aa23.39■■□□□ 1.33
GRAMD1A-207ENST00000598118 ALDH8A1Q9H2A2 487 aaPredicted RBP23.39■■□□□ 1.33
GRAMD1A-207ENST00000598118 HMG20BQ9P0W2 317 aa23.39■■□□□ 1.33
GRAMD1A-207ENST00000598118 CHMP3Q9Y3E7 222 aa23.39■■□□□ 1.33
GRAMD1A-207ENST00000598118 TJP1Q07157 1748 aa23.38■■□□□ 1.33
GRAMD1A-207ENST00000598118 WDR17Q8IZU2 1322 aa23.38■■□□□ 1.33
GRAMD1A-207ENST00000598118 LARP1BQ659C4 914 aaKnown RBP23.38■■□□□ 1.33
GRAMD1A-207ENST00000598118 TOM1L2Q6ZVM7 507 aa23.38■■□□□ 1.33
GRAMD1A-207ENST00000598118 DDX46Q7L014 1031 aaKnown RBP23.38■■□□□ 1.33
GRAMD1A-207ENST00000598118 HSPA2P54652 639 aa23.38■■□□□ 1.33
GRAMD1A-207ENST00000598118 ATG9AQ7Z3C6 839 aa23.38■■□□□ 1.33
GRAMD1A-207ENST00000598118 PCDH11XQ9BZA7 1347 aa23.37■■□□□ 1.33
GRAMD1A-207ENST00000598118 PCDH11YQ9BZA8 1340 aa23.37■■□□□ 1.33
GRAMD1A-207ENST00000598118 CDC37L1Q7L3B6 337 aa23.37■■□□□ 1.33
GRAMD1A-207ENST00000598118 PRDM11Q9NQV5 511 aa23.37■■□□□ 1.33
GRAMD1A-207ENST00000598118 ANKRD1Q15327 319 aa23.36■■□□□ 1.33
GRAMD1A-207ENST00000598118 KCPQ6ZWJ8 1503 aa23.36■■□□□ 1.33
GRAMD1A-207ENST00000598118 STK3Q13188 491 aa23.35■■□□□ 1.33
GRAMD1A-207ENST00000598118 SLFNL1Q499Z3 407 aa23.35■■□□□ 1.33
GRAMD1A-207ENST00000598118 FERMT3Q86UX7 667 aa23.35■■□□□ 1.33
GRAMD1A-207ENST00000598118 CWC25Q9NXE8 425 aaPredicted RBP23.35■■□□□ 1.33
GRAMD1A-207ENST00000598118 RFX7Q2KHR2 1363 aa23.35■■□□□ 1.33
GRAMD1A-207ENST00000598118 FAM173BQ6P4H8 233 aa23.35■■□□□ 1.33
GRAMD1A-207ENST00000598118 ZBTB3Q9H5J0 574 aa23.35■■□□□ 1.33
GRAMD1A-207ENST00000598118 TIMM10P62072 90 aa23.34■■□□□ 1.33
GRAMD1A-207ENST00000598118 MCMDC2Q4G0Z9 681 aa23.34■■□□□ 1.33
GRAMD1A-207ENST00000598118 ERVV-2B6SEH9 535 aa23.34■■□□□ 1.33
GRAMD1A-207ENST00000598118 CYP21A2P08686 494 aa23.34■■□□□ 1.33
GRAMD1A-207ENST00000598118 NEUROD6Q96NK8 337 aa23.34■■□□□ 1.33
GRAMD1A-207ENST00000598118 COL5A2P05997 1499 aaPredicted RBP23.33■■□□□ 1.32
GRAMD1A-207ENST00000598118 SHANK3Q9BYB0 1731 aa23.33■■□□□ 1.32
GRAMD1A-207ENST00000598118 KBTBD3Q8NAB2 608 aa23.33■■□□□ 1.32
GRAMD1A-207ENST00000598118 ZNF594Q96JF6 807 aaPredicted RBP23.33■■□□□ 1.32
GRAMD1A-207ENST00000598118 NEK1Q96PY6 1258 aa23.33■■□□□ 1.32
GRAMD1A-207ENST00000598118 ZKSCAN5Q9Y2L8 839 aa23.33■■□□□ 1.32
GRAMD1A-207ENST00000598118 LAMA4Q16363 1823 aa23.32■■□□□ 1.32
GRAMD1A-207ENST00000598118 LRRC24Q50LG9 513 aa23.32■■□□□ 1.32
GRAMD1A-207ENST00000598118 PAPPAQ13219 1627 aa23.32■■□□□ 1.32
GRAMD1A-207ENST00000598118 HCLS1P14317 486 aaPredicted RBP23.31■■□□□ 1.32
GRAMD1A-207ENST00000598118 NKX1-1Q15270 411 aaPredicted RBP23.31■■□□□ 1.32
GRAMD1A-207ENST00000598118 TTC6Q86TZ1 520 aa23.31■■□□□ 1.32
GRAMD1A-207ENST00000598118 LETM1O95202 739 aaPredicted RBP23.31■■□□□ 1.32
GRAMD1A-207ENST00000598118 KRT32Q14532 448 aa23.31■■□□□ 1.32
GRAMD1A-207ENST00000598118 CSPP1Q1MSJ5 1256 aa23.31■■□□□ 1.32
GRAMD1A-207ENST00000598118 GIMAP6Q6P9H5 292 aa23.31■■□□□ 1.32
GRAMD1A-207ENST00000598118 FUCA2Q9BTY2 467 aa23.31■■□□□ 1.32
GRAMD1A-207ENST00000598118 U3KPZ7 1027 aaPredicted RBP23.31■■□□□ 1.32
GRAMD1A-207ENST00000598118 GOLIM4O00461 696 aa23.3■■□□□ 1.32
GRAMD1A-207ENST00000598118 FAM184AQ8NB25 1140 aa23.3■■□□□ 1.32
GRAMD1A-207ENST00000598118 CCDC39Q9UFE4 941 aa23.3■■□□□ 1.32
GRAMD1A-207ENST00000598118 ZNF500O60304 480 aaPredicted RBP23.3■■□□□ 1.32
GRAMD1A-207ENST00000598118 OFD1O75665 1012 aa23.3■■□□□ 1.32
GRAMD1A-207ENST00000598118 PDCP20941 246 aa23.3■■□□□ 1.32
GRAMD1A-207ENST00000598118 STOX1Q6ZVD7 989 aa23.3■■□□□ 1.32
GRAMD1A-207ENST00000598118 JAK2O60674 1132 aa23.29■■□□□ 1.32
GRAMD1A-207ENST00000598118 Q6ZUG5 572 aa23.29■■□□□ 1.32
GRAMD1A-207ENST00000598118 CCDC191Q8NCU4 936 aa23.29■■□□□ 1.32
GRAMD1A-207ENST00000598118 PALLDQ8WX93 1383 aa23.29■■□□□ 1.32
GRAMD1A-207ENST00000598118 SH3TC1Q8TE82 1336 aa23.29■■□□□ 1.32
GRAMD1A-207ENST00000598118 IL2RBP14784 551 aa23.29■■□□□ 1.32
GRAMD1A-207ENST00000598118 IL15P40933 162 aaPredicted RBP23.29■■□□□ 1.32
GRAMD1A-207ENST00000598118 PUS3Q9BZE2 481 aaKnown RBP23.29■■□□□ 1.32
GRAMD1A-207ENST00000598118 PAG1Q9NWQ8 432 aa23.29■■□□□ 1.32
GRAMD1A-207ENST00000598118 KRT85P78386 507 aa23.28■■□□□ 1.32
GRAMD1A-207ENST00000598118 UVSSAQ2YD98 709 aa23.28■■□□□ 1.32
GRAMD1A-207ENST00000598118 GTF3C6Q969F1 213 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms