RNA–Protein interactions for RNA: ENST00000596250.5

SOX2-OT-225, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 610 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-225ENST00000596250 CASP7P55210 303 aa17.25■□□□□ 0.35
SOX2-OT-225ENST00000596250 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
SOX2-OT-225ENST00000596250 NOB1Q9ULX3 412 aaKnown RBP17.25■□□□□ 0.35
SOX2-OT-225ENST00000596250 LAMB2P55268 1798 aa17.25■□□□□ 0.35
SOX2-OT-225ENST00000596250 PDE8AO60658 829 aa17.24■□□□□ 0.35
SOX2-OT-225ENST00000596250 ARHGAP45Q92619 1136 aa17.24■□□□□ 0.35
SOX2-OT-225ENST00000596250 SNED1Q8TER0 1413 aa17.23■□□□□ 0.35
SOX2-OT-225ENST00000596250 PPEF1O14829 653 aaPredicted RBP17.23■□□□□ 0.35
SOX2-OT-225ENST00000596250 ALDH1L1O75891 902 aa17.23■□□□□ 0.35
SOX2-OT-225ENST00000596250 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
SOX2-OT-225ENST00000596250 CCDC93Q567U6 631 aa17.23■□□□□ 0.35
SOX2-OT-225ENST00000596250 SOGA3Q5TF21 947 aa17.23■□□□□ 0.35
SOX2-OT-225ENST00000596250 DDX46Q7L014 1031 aaKnown RBP17.23■□□□□ 0.35
SOX2-OT-225ENST00000596250 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
SOX2-OT-225ENST00000596250 COL4A1P02462 1669 aa17.23■□□□□ 0.35
SOX2-OT-225ENST00000596250 CTSWP56202 376 aa17.22■□□□□ 0.35
SOX2-OT-225ENST00000596250 GRAPQ13588 217 aa17.22■□□□□ 0.35
SOX2-OT-225ENST00000596250 C9orf131Q5VYM1 1079 aa17.22■□□□□ 0.35
SOX2-OT-225ENST00000596250 GRAPLQ8TC17 118 aaPredicted RBP17.22■□□□□ 0.35
SOX2-OT-225ENST00000596250 LTBP3Q9NS15 1303 aa17.21■□□□□ 0.35
SOX2-OT-225ENST00000596250 CACNA1SQ13698 1873 aa17.21■□□□□ 0.35
SOX2-OT-225ENST00000596250 CELF1Q92879 486 aaKnown RBP17.21■□□□□ 0.35
SOX2-OT-225ENST00000596250 CCDC85AQ96PX6 553 aaPredicted RBP17.21■□□□□ 0.35
SOX2-OT-225ENST00000596250 GRM8O00222 908 aa17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 BBOX1O75936 387 aa17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 LMNB1P20700 586 aa17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 CCDC152Q4G0S7 254 aa17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 ATF7IPQ6VMQ6 1270 aa17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 TTLL11Q8NHH1 800 aa17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 PLA2G12BQ9BX93 195 aa17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 TAOK3Q9H2K8 898 aa17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 CHMP4BQ9H444 224 aaKnown RBP17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 RNF181Q9P0P0 153 aa17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 ATP6V0A2Q9Y487 856 aa17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 SUPT16HQ9Y5B9 1047 aaKnown RBP17.2■□□□□ 0.34
SOX2-OT-225ENST00000596250 RTKN2Q8IZC4 609 aa17.19■□□□□ 0.34
SOX2-OT-225ENST00000596250 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
SOX2-OT-225ENST00000596250 CHD4Q14839 1912 aa17.19■□□□□ 0.34
SOX2-OT-225ENST00000596250 NEFLP07196 543 aa17.18■□□□□ 0.34
SOX2-OT-225ENST00000596250 FKBP4Q02790 459 aaKnown RBP eCLIP17.18■□□□□ 0.34
SOX2-OT-225ENST00000596250 CC2D2BQ6DHV5 1058 aa17.18■□□□□ 0.34
SOX2-OT-225ENST00000596250 DZIP1LQ8IYY4 767 aaKnown RBP17.18■□□□□ 0.34
SOX2-OT-225ENST00000596250 ZNF784Q8NCA9 323 aaPredicted RBP17.18■□□□□ 0.34
SOX2-OT-225ENST00000596250 GREM2Q9H772 168 aa17.18■□□□□ 0.34
SOX2-OT-225ENST00000596250 C9orf78Q9NZ63 289 aaPredicted RBP17.18■□□□□ 0.34
SOX2-OT-225ENST00000596250 UTYO14607 1347 aa17.18■□□□□ 0.34
SOX2-OT-225ENST00000596250 RTL9Q8NET4 1388 aa17.17■□□□□ 0.34
SOX2-OT-225ENST00000596250 NBPF7P0C2Y1 421 aaPredicted RBP17.17■□□□□ 0.34
SOX2-OT-225ENST00000596250 CCT4P50991 539 aaKnown RBP17.17■□□□□ 0.34
SOX2-OT-225ENST00000596250 RRP1P56182 461 aaKnown RBP17.17■□□□□ 0.34
SOX2-OT-225ENST00000596250 FOXO4P98177 505 aa17.17■□□□□ 0.34
SOX2-OT-225ENST00000596250 FER1L6Q2WGJ9 1857 aa17.17■□□□□ 0.34
SOX2-OT-225ENST00000596250 SP8Q8IXZ3 490 aa17.17■□□□□ 0.34
SOX2-OT-225ENST00000596250 CSF1RP07333 972 aa17.16■□□□□ 0.34
SOX2-OT-225ENST00000596250 TRIM27P14373 513 aa17.16■□□□□ 0.34
SOX2-OT-225ENST00000596250 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
SOX2-OT-225ENST00000596250 EPHA10Q5JZY3 1008 aa17.16■□□□□ 0.34
SOX2-OT-225ENST00000596250 TMC4Q7Z404 712 aa17.16■□□□□ 0.34
SOX2-OT-225ENST00000596250 CLUAP1Q96AJ1 413 aa17.16■□□□□ 0.34
SOX2-OT-225ENST00000596250 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
SOX2-OT-225ENST00000596250 PSMD1Q99460 953 aa17.16■□□□□ 0.34
SOX2-OT-225ENST00000596250 ZNF277Q9NRM2 450 aaPredicted RBP17.16■□□□□ 0.34
SOX2-OT-225ENST00000596250 HDAC5Q9UQL6 1122 aa17.16■□□□□ 0.34
SOX2-OT-225ENST00000596250 TNNQ9UQP3 1299 aa17.16■□□□□ 0.34
SOX2-OT-225ENST00000596250 PDE3AQ14432 1141 aa17.15■□□□□ 0.34
SOX2-OT-225ENST00000596250 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
SOX2-OT-225ENST00000596250 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
SOX2-OT-225ENST00000596250 KAZALD1Q96I82 304 aa17.15■□□□□ 0.34
SOX2-OT-225ENST00000596250 USP44Q9H0E7 712 aa17.15■□□□□ 0.34
SOX2-OT-225ENST00000596250 LRRC37AA6NMS7 1700 aa17.13■□□□□ 0.33
SOX2-OT-225ENST00000596250 PLIN1O60240 522 aa17.13■□□□□ 0.33
SOX2-OT-225ENST00000596250 ITGA6P23229 1130 aa17.13■□□□□ 0.33
SOX2-OT-225ENST00000596250 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
SOX2-OT-225ENST00000596250 CDC5LQ99459 802 aaKnown RBP17.13■□□□□ 0.33
SOX2-OT-225ENST00000596250 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
SOX2-OT-225ENST00000596250 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
SOX2-OT-225ENST00000596250 TAF1P21675 1872 aa17.13■□□□□ 0.33
SOX2-OT-225ENST00000596250 DUOX1Q9NRD9 1551 aa17.12■□□□□ 0.33
SOX2-OT-225ENST00000596250 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
SOX2-OT-225ENST00000596250 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
SOX2-OT-225ENST00000596250 DPP8Q6V1X1 898 aaPredicted RBP17.12■□□□□ 0.33
SOX2-OT-225ENST00000596250 ITPRIPQ8IWB1 547 aa17.12■□□□□ 0.33
SOX2-OT-225ENST00000596250 MPNDQ8N594 471 aa17.12■□□□□ 0.33
SOX2-OT-225ENST00000596250 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
SOX2-OT-225ENST00000596250 SBF1O95248 1867 aa17.12■□□□□ 0.33
SOX2-OT-225ENST00000596250 COL4A5P29400 1685 aa17.11■□□□□ 0.33
SOX2-OT-225ENST00000596250 GPSM2P81274 684 aa17.11■□□□□ 0.33
SOX2-OT-225ENST00000596250 INTS3Q68E01 1043 aaKnown RBP17.11■□□□□ 0.33
SOX2-OT-225ENST00000596250 ZNF526Q8TF50 670 aaPredicted RBP17.11■□□□□ 0.33
SOX2-OT-225ENST00000596250 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
SOX2-OT-225ENST00000596250 ANKRD44Q8N8A2 993 aa17.1■□□□□ 0.33
SOX2-OT-225ENST00000596250 DDX19BQ9UMR2 479 aa17.1■□□□□ 0.33
SOX2-OT-225ENST00000596250 NSFL1CQ9UNZ2 370 aaKnown RBP17.1■□□□□ 0.33
SOX2-OT-225ENST00000596250 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
SOX2-OT-225ENST00000596250 TIAM2Q8IVF5 1701 aa17.1■□□□□ 0.33
SOX2-OT-225ENST00000596250 RABL6Q3YEC7 729 aaPredicted RBP17.09■□□□□ 0.33
SOX2-OT-225ENST00000596250 MEIS3Q99687 375 aa17.09■□□□□ 0.33
SOX2-OT-225ENST00000596250 BSDC1Q9NW68 430 aaPredicted RBP17.09■□□□□ 0.33
SOX2-OT-225ENST00000596250 LTBP1Q14766 1721 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms