RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 CEBPZQ03701 1054 aaKnown RBP20.52■□□□□ 0.88
ARHGEF1-213ENST00000595897 AKAP4Q5JQC9 854 aa20.52■□□□□ 0.87
ARHGEF1-213ENST00000595897 IP6K1Q92551 441 aa20.52■□□□□ 0.87
ARHGEF1-213ENST00000595897 PGBD1Q96JS3 809 aa20.52■□□□□ 0.87
ARHGEF1-213ENST00000595897 SMTNL1A8MU46 457 aa20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 FGD1P98174 961 aa20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 C1orf141Q5JVX7 400 aa20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 LINS1Q8NG48 757 aa20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 ZNF592Q92610 1267 aa20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 CRYBG1Q9Y4K1 1723 aa20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 DIP2AQ14689 1571 aa20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 PLEKHO1Q53GL0 409 aaPredicted RBP20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 RBM43Q6ZSC3 357 aaKnown RBP20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 CCDC112Q8NEF3 446 aa20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 KLHDC4Q8TBB5 520 aa20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 BRF1Q92994 677 aa20.51■□□□□ 0.87
ARHGEF1-213ENST00000595897 NCBP1Q09161 790 aaKnown RBP20.5■□□□□ 0.87
ARHGEF1-213ENST00000595897 GIGYF1O75420 1035 aaPredicted RBP20.5■□□□□ 0.87
ARHGEF1-213ENST00000595897 DDX58O95786 925 aaKnown RBP20.5■□□□□ 0.87
ARHGEF1-213ENST00000595897 CACTINQ8WUQ7 758 aaKnown RBP20.5■□□□□ 0.87
ARHGEF1-213ENST00000595897 LRRC59Q96AG4 307 aaKnown RBP20.5■□□□□ 0.87
ARHGEF1-213ENST00000595897 EDC3Q96F86 508 aaKnown RBP20.5■□□□□ 0.87
ARHGEF1-213ENST00000595897 PRAMEF22A3QJZ6 481 aa20.49■□□□□ 0.87
ARHGEF1-213ENST00000595897 KRT32Q14532 448 aa20.49■□□□□ 0.87
ARHGEF1-213ENST00000595897 BCL11BQ9C0K0 894 aaPredicted RBP20.49■□□□□ 0.87
ARHGEF1-213ENST00000595897 CFAP45Q9UL16 551 aa20.49■□□□□ 0.87
ARHGEF1-213ENST00000595897 NPHP4O75161 1426 aaPredicted RBP20.49■□□□□ 0.87
ARHGEF1-213ENST00000595897 GTF3C6Q969F1 213 aa20.49■□□□□ 0.87
ARHGEF1-213ENST00000595897 KAZALD1Q96I82 304 aa20.49■□□□□ 0.87
ARHGEF1-213ENST00000595897 NEK1Q96PY6 1258 aa20.49■□□□□ 0.87
ARHGEF1-213ENST00000595897 ALDH8A1Q9H2A2 487 aaPredicted RBP20.49■□□□□ 0.87
ARHGEF1-213ENST00000595897 SNRKQ9NRH2 765 aa20.49■□□□□ 0.87
ARHGEF1-213ENST00000595897 PAXBP1Q9Y5B6 917 aa20.49■□□□□ 0.87
ARHGEF1-213ENST00000595897 TAF5LO75529 589 aa20.48■□□□□ 0.87
ARHGEF1-213ENST00000595897 CAVIN2O95810 425 aa20.48■□□□□ 0.87
ARHGEF1-213ENST00000595897 FEZ1Q99689 392 aa20.47■□□□□ 0.87
ARHGEF1-213ENST00000595897 RGPD8O14715 1765 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF1-213ENST00000595897 MED23Q9ULK4 1368 aa20.47■□□□□ 0.87
ARHGEF1-213ENST00000595897 BECN2A8MW95 431 aa20.47■□□□□ 0.87
ARHGEF1-213ENST00000595897 FOSBP53539 338 aa20.47■□□□□ 0.87
ARHGEF1-213ENST00000595897 CCDC144BQ3MJ40 725 aa20.47■□□□□ 0.87
ARHGEF1-213ENST00000595897 Q6ZUG5 572 aa20.47■□□□□ 0.87
ARHGEF1-213ENST00000595897 RIC3Q7Z5B4 369 aa20.47■□□□□ 0.87
ARHGEF1-213ENST00000595897 CCDC144CPQ8IYA2 1237 aa20.47■□□□□ 0.87
ARHGEF1-213ENST00000595897 RNMTO43148 476 aaKnown RBP20.46■□□□□ 0.87
ARHGEF1-213ENST00000595897 RESTQ13127 1097 aa20.46■□□□□ 0.87
ARHGEF1-213ENST00000595897 ZSCAN16Q9H4T2 348 aaPredicted RBP20.46■□□□□ 0.87
ARHGEF1-213ENST00000595897 ADGRL3Q9HAR2 1447 aa20.46■□□□□ 0.87
ARHGEF1-213ENST00000595897 KCNA6P17658 529 aa20.46■□□□□ 0.87
ARHGEF1-213ENST00000595897 TSGA10IPQ3SY00 556 aa20.46■□□□□ 0.87
ARHGEF1-213ENST00000595897 IGSF3O75054 1194 aa20.45■□□□□ 0.86
ARHGEF1-213ENST00000595897 CEP135Q66GS9 1140 aa20.45■□□□□ 0.86
ARHGEF1-213ENST00000595897 LRRC2Q9BYS8 371 aa20.45■□□□□ 0.86
ARHGEF1-213ENST00000595897 NAA30Q147X3 362 aaPredicted RBP20.45■□□□□ 0.86
ARHGEF1-213ENST00000595897 AMOTQ4VCS5 1084 aa20.44■□□□□ 0.86
ARHGEF1-213ENST00000595897 NDUFB9Q9Y6M9 179 aa20.44■□□□□ 0.86
ARHGEF1-213ENST00000595897 NEXNQ0ZGT2 675 aa20.44■□□□□ 0.86
ARHGEF1-213ENST00000595897 DNAJC2Q99543 621 aaKnown RBP20.44■□□□□ 0.86
ARHGEF1-213ENST00000595897 C11orf57Q6ZUT1 292 aaPredicted RBP20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 FILIP1Q7Z7B0 1213 aa20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 LRRC8AQ8IWT6 810 aa20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 OGFRQ9NZT2 677 aa20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 PHF8Q9UPP1 1060 aa20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 KIF20AO95235 890 aa20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 SYCP1Q15431 976 aa20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 STX1AQ16623 288 aa20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 CCDC73Q6ZRK6 1079 aa20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 CCDC129Q6ZRS4 1044 aa20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 CCAR1Q8IX12 1150 aaKnown RBP20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 CGNQ9P2M7 1197 aaKnown RBP20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 ANKARQ7Z5J8 1434 aa20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 CDC25BP30305 580 aa20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 ARID5BQ14865 1188 aa20.43■□□□□ 0.86
ARHGEF1-213ENST00000595897 NAP1L2Q9ULW6 460 aaPredicted RBP20.42■□□□□ 0.86
ARHGEF1-213ENST00000595897 SETD1BQ9UPS6 1966 aaKnown RBP20.42■□□□□ 0.86
ARHGEF1-213ENST00000595897 SKILP12757 684 aa20.42■□□□□ 0.86
ARHGEF1-213ENST00000595897 USPL1Q5W0Q7 1092 aa20.42■□□□□ 0.86
ARHGEF1-213ENST00000595897 DDX21Q9NR30 783 aaKnown RBP eCLIP20.42■□□□□ 0.86
ARHGEF1-213ENST00000595897 CTAGE5O15320 804 aa20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 KINO60870 393 aaKnown RBP20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 MYL6BP14649 208 aa20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 IQCB1Q15051 598 aa20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 PTPN14Q15678 1187 aa20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 FTOQ9C0B1 505 aaKnown RBP eCLIP20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 U3KPZ7 1027 aaPredicted RBP20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 UTYO14607 1347 aa20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 SCRN1Q12765 414 aa20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 FBXW7Q969H0 707 aa20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 SEC62Q99442 399 aaKnown RBP20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 USP16Q9Y5T5 823 aa20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 MED1Q15648 1581 aaPredicted RBP20.41■□□□□ 0.86
ARHGEF1-213ENST00000595897 NEMFO60524 1076 aa20.4■□□□□ 0.86
ARHGEF1-213ENST00000595897 IGKV5-2P06315 115 aa20.4■□□□□ 0.86
ARHGEF1-213ENST00000595897 CYP21A2P08686 494 aa20.4■□□□□ 0.86
ARHGEF1-213ENST00000595897 MRFAP1L1Q96HT8 127 aa20.4■□□□□ 0.86
ARHGEF1-213ENST00000595897 CTNNA3Q9UI47 895 aa20.4■□□□□ 0.86
ARHGEF1-213ENST00000595897 CHGBP05060 677 aa20.4■□□□□ 0.86
ARHGEF1-213ENST00000595897 PSME1Q06323 249 aa20.4■□□□□ 0.86
ARHGEF1-213ENST00000595897 SARM1Q6SZW1 724 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms