RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 SAGE1Q9NXZ1 904 aa18.35■□□□□ 0.53
SHKBP1-208ENST00000595726 H7C1D1 291 aa18.34■□□□□ 0.53
SHKBP1-208ENST00000595726 EGFRP00533 1210 aa18.34■□□□□ 0.53
SHKBP1-208ENST00000595726 KIF6Q6ZMV9 814 aa18.34■□□□□ 0.53
SHKBP1-208ENST00000595726 MICALL2Q8IY33 904 aa18.34■□□□□ 0.53
SHKBP1-208ENST00000595726 SUPT20HQ8NEM7 779 aa18.34■□□□□ 0.53
SHKBP1-208ENST00000595726 NLRP3Q96P20 1036 aa18.34■□□□□ 0.53
SHKBP1-208ENST00000595726 ABCC4O15439 1325 aa18.33■□□□□ 0.53
SHKBP1-208ENST00000595726 KIAA2012Q0VF49 1180 aa18.33■□□□□ 0.52
SHKBP1-208ENST00000595726 TAF7Q15545 349 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-208ENST00000595726 TBC1D10BQ4KMP7 808 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-208ENST00000595726 KRT26Q7Z3Y9 468 aa18.33■□□□□ 0.52
SHKBP1-208ENST00000595726 CTU1Q7Z7A3 348 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-208ENST00000595726 MPNDQ8N594 471 aa18.33■□□□□ 0.52
SHKBP1-208ENST00000595726 CCDC102AQ96A19 550 aa18.33■□□□□ 0.52
SHKBP1-208ENST00000595726 CSRNP1Q96S65 589 aa18.33■□□□□ 0.52
SHKBP1-208ENST00000595726 GBA2Q9HCG7 927 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-208ENST00000595726 NUP98P52948 1817 aa18.33■□□□□ 0.52
SHKBP1-208ENST00000595726 MKI67P46013 3256 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-208ENST00000595726 CDHR2Q9BYE9 1310 aa18.32■□□□□ 0.52
SHKBP1-208ENST00000595726 ADM5C9JUS6 153 aa18.32■□□□□ 0.52
SHKBP1-208ENST00000595726 RBM26Q5T8P6 1007 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-208ENST00000595726 C2orf69Q8N8R5 385 aa18.32■□□□□ 0.52
SHKBP1-208ENST00000595726 HPS5Q9UPZ3 1129 aa18.32■□□□□ 0.52
SHKBP1-208ENST00000595726 IBTKQ9P2D0 1353 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-208ENST00000595726 SP8Q8IXZ3 490 aa18.3■□□□□ 0.52
SHKBP1-208ENST00000595726 BBOX1O75936 387 aa18.29■□□□□ 0.52
SHKBP1-208ENST00000595726 U2AF1L5P0DN76 240 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-208ENST00000595726 U2AF1Q01081 240 aaKnown RBP eCLIP18.29■□□□□ 0.52
SHKBP1-208ENST00000595726 SLC10A5Q5PT55 438 aa18.29■□□□□ 0.52
SHKBP1-208ENST00000595726 GIGYF2Q6Y7W6 1299 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-208ENST00000595726 PPP1R42Q7Z4L9 355 aa18.29■□□□□ 0.52
SHKBP1-208ENST00000595726 PSMD14O00487 310 aa18.28■□□□□ 0.52
SHKBP1-208ENST00000595726 HCLS1P14317 486 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-208ENST00000595726 KCNQ5Q9NR82 932 aa18.28■□□□□ 0.52
SHKBP1-208ENST00000595726 SLC10A3P09131 477 aa18.27■□□□□ 0.52
SHKBP1-208ENST00000595726 DPF2Q92785 391 aa18.27■□□□□ 0.52
SHKBP1-208ENST00000595726 DCPSQ96C86 337 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-208ENST00000595726 THUMPD2Q9BTF0 503 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-208ENST00000595726 UTP14AQ9BVJ6 771 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-208ENST00000595726 ASTN2O75129 1339 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-208ENST00000595726 HTATSF1O43719 755 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-208ENST00000595726 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-208ENST00000595726 ZNF428Q96B54 188 aa18.26■□□□□ 0.51
SHKBP1-208ENST00000595726 DBNDD1Q9H9R9 158 aa18.26■□□□□ 0.51
SHKBP1-208ENST00000595726 POLR2AP24928 1970 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-208ENST00000595726 RIMBP2O15034 1052 aa18.25■□□□□ 0.51
SHKBP1-208ENST00000595726 PARP10Q53GL7 1025 aa18.25■□□□□ 0.51
SHKBP1-208ENST00000595726 TBC1D8O95759 1140 aa18.24■□□□□ 0.51
SHKBP1-208ENST00000595726 CFAP53Q96M91 514 aa18.24■□□□□ 0.51
SHKBP1-208ENST00000595726 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
SHKBP1-208ENST00000595726 DDX46Q7L014 1031 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-208ENST00000595726 ZNF296Q8WUU4 475 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-208ENST00000595726 HDAC9Q9UKV0 1011 aa18.23■□□□□ 0.51
SHKBP1-208ENST00000595726 LAMB4A4D0S4 1761 aa18.22■□□□□ 0.51
SHKBP1-208ENST00000595726 CENPFP49454 3210 aa18.22■□□□□ 0.51
SHKBP1-208ENST00000595726 AKAP11Q9UKA4 1901 aa18.22■□□□□ 0.51
SHKBP1-208ENST00000595726 ANXA1P04083 346 aa18.22■□□□□ 0.51
SHKBP1-208ENST00000595726 GRAPQ13588 217 aa18.22■□□□□ 0.51
SHKBP1-208ENST00000595726 DOK7Q18PE1 504 aa18.22■□□□□ 0.51
SHKBP1-208ENST00000595726 WASHC4Q2M389 1173 aa18.22■□□□□ 0.51
SHKBP1-208ENST00000595726 RASAL3Q86YV0 1011 aa18.22■□□□□ 0.51
SHKBP1-208ENST00000595726 GRAPLQ8TC17 118 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-208ENST00000595726 CDCA5Q96FF9 252 aa18.22■□□□□ 0.51
SHKBP1-208ENST00000595726 GGA3Q9NZ52 723 aa18.22■□□□□ 0.51
SHKBP1-208ENST00000595726 HTTP42858 3142 aa18.22■□□□□ 0.51
SHKBP1-208ENST00000595726 MOB2Q70IA6 237 aa18.21■□□□□ 0.51
SHKBP1-208ENST00000595726 LRP10Q7Z4F1 713 aa18.21■□□□□ 0.51
SHKBP1-208ENST00000595726 SULF1Q8IWU6 871 aa18.21■□□□□ 0.51
SHKBP1-208ENST00000595726 NSFL1CQ9UNZ2 370 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-208ENST00000595726 DUOX1Q9NRD9 1551 aa18.21■□□□□ 0.51
SHKBP1-208ENST00000595726 TAF1P21675 1872 aa18.2■□□□□ 0.5
SHKBP1-208ENST00000595726 PDIA6Q15084 440 aa18.2■□□□□ 0.5
SHKBP1-208ENST00000595726 PKN2Q16513 984 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-208ENST00000595726 PROSER3Q2NL68 480 aa18.2■□□□□ 0.5
SHKBP1-208ENST00000595726 KIF4BQ2VIQ3 1234 aa18.2■□□□□ 0.5
SHKBP1-208ENST00000595726 HABP4Q5JVS0 413 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-208ENST00000595726 PNISRQ8TF01 805 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-208ENST00000595726 RTL9Q8NET4 1388 aa18.19■□□□□ 0.5
SHKBP1-208ENST00000595726 C6orf229H3BNL8 230 aa18.19■□□□□ 0.5
SHKBP1-208ENST00000595726 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-208ENST00000595726 NLRP10Q86W26 655 aa18.19■□□□□ 0.5
SHKBP1-208ENST00000595726 POLLQ9UGP5 575 aa18.19■□□□□ 0.5
SHKBP1-208ENST00000595726 TRMT112Q9UI30 125 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-208ENST00000595726 SCAF8Q9UPN6 1271 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-208ENST00000595726 ECE2O60344 883 aa18.18■□□□□ 0.5
SHKBP1-208ENST00000595726 RPS12P25398 132 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-208ENST00000595726 GCC1Q96CN9 775 aa18.18■□□□□ 0.5
SHKBP1-208ENST00000595726 GPSM2P81274 684 aa18.17■□□□□ 0.5
SHKBP1-208ENST00000595726 AIMP1Q12904 312 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-208ENST00000595726 ANGEL2Q5VTE6 544 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-208ENST00000595726 REM2Q8IYK8 340 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-208ENST00000595726 CELF1Q92879 486 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-208ENST00000595726 LAMB2P55268 1798 aa18.17■□□□□ 0.5
SHKBP1-208ENST00000595726 UBE2Q2LH0YL09 131 aa18.16■□□□□ 0.5
SHKBP1-208ENST00000595726 SCARF1Q14162 830 aa18.16■□□□□ 0.5
SHKBP1-208ENST00000595726 GPR25O00155 361 aa18.15■□□□□ 0.5
SHKBP1-208ENST00000595726 PPP2R1AP30153 589 aa18.15■□□□□ 0.5
SHKBP1-208ENST00000595726 PRAMEF18Q5VWM3 479 aa18.15■□□□□ 0.5
SHKBP1-208ENST00000595726 FBXO46Q6PJ61 603 aaPredicted RBP18.15■□□□□ 0.5
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