RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 DPF2Q92785 391 aa13.72□□□□□ -0.21
NOTCH3-203ENST00000595514 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
NOTCH3-203ENST00000595514 KNSTRNQ9Y448 316 aa13.72□□□□□ -0.21
NOTCH3-203ENST00000595514 SZT2Q5T011 3432 aa13.71□□□□□ -0.21
NOTCH3-203ENST00000595514 GPR25O00155 361 aa13.71□□□□□ -0.21
NOTCH3-203ENST00000595514 NOM1Q5C9Z4 860 aaKnown RBP13.71□□□□□ -0.21
NOTCH3-203ENST00000595514 RBM26Q5T8P6 1007 aaKnown RBP13.71□□□□□ -0.21
NOTCH3-203ENST00000595514 MPNDQ8N594 471 aa13.71□□□□□ -0.21
NOTCH3-203ENST00000595514 COLQQ9Y215 455 aaPredicted RBP13.71□□□□□ -0.21
NOTCH3-203ENST00000595514 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
NOTCH3-203ENST00000595514 DIAPH1O60610 1272 aaKnown RBP13.7□□□□□ -0.22
NOTCH3-203ENST00000595514 INTS3Q68E01 1043 aaKnown RBP13.7□□□□□ -0.22
NOTCH3-203ENST00000595514 SLC17A8Q8NDX2 589 aa13.7□□□□□ -0.22
NOTCH3-203ENST00000595514 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
NOTCH3-203ENST00000595514 IBTKQ9P2D0 1353 aaPredicted RBP13.7□□□□□ -0.22
NOTCH3-203ENST00000595514 YDJCA8MPS7 323 aa13.69□□□□□ -0.22
NOTCH3-203ENST00000595514 FKTNO75072 461 aa13.69□□□□□ -0.22
NOTCH3-203ENST00000595514 EGFRP00533 1210 aa13.69□□□□□ -0.22
NOTCH3-203ENST00000595514 GPTP24298 496 aa13.69□□□□□ -0.22
NOTCH3-203ENST00000595514 C3orf67Q6ZVT6 689 aa13.69□□□□□ -0.22
NOTCH3-203ENST00000595514 CDCA5Q96FF9 252 aa13.69□□□□□ -0.22
NOTCH3-203ENST00000595514 NLRP3Q96P20 1036 aa13.69□□□□□ -0.22
NOTCH3-203ENST00000595514 A0A0C4DFX4 3053 aa13.68□□□□□ -0.22
NOTCH3-203ENST00000595514 ERVV-1B6SEH8 477 aa13.68□□□□□ -0.22
NOTCH3-203ENST00000595514 FKBP1BP68106 108 aa13.68□□□□□ -0.22
NOTCH3-203ENST00000595514 SUSD4Q5VX71 490 aa13.68□□□□□ -0.22
NOTCH3-203ENST00000595514 NGEFQ8N5V2 710 aa13.68□□□□□ -0.22
NOTCH3-203ENST00000595514 GGA3Q9NZ52 723 aa13.68□□□□□ -0.22
NOTCH3-203ENST00000595514 ABCC4O15439 1325 aa13.67□□□□□ -0.22
NOTCH3-203ENST00000595514 PSMD14O00487 310 aa13.67□□□□□ -0.22
NOTCH3-203ENST00000595514 PER1O15534 1290 aaPredicted RBP13.67□□□□□ -0.22
NOTCH3-203ENST00000595514 BBOX1O75936 387 aa13.67□□□□□ -0.22
NOTCH3-203ENST00000595514 RPS12P25398 132 aaKnown RBP13.67□□□□□ -0.22
NOTCH3-203ENST00000595514 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
NOTCH3-203ENST00000595514 SP8Q8IXZ3 490 aa13.67□□□□□ -0.22
NOTCH3-203ENST00000595514 SIPA1L3O60292 1781 aaPredicted RBP13.67□□□□□ -0.22
NOTCH3-203ENST00000595514 MAP3K15Q6ZN16 1313 aa13.66□□□□□ -0.22
NOTCH3-203ENST00000595514 UBN2Q6ZU65 1347 aa13.66□□□□□ -0.22
NOTCH3-203ENST00000595514 HTTP42858 3142 aa13.66□□□□□ -0.22
NOTCH3-203ENST00000595514 BRCA2P51587 3418 aa13.66□□□□□ -0.22
NOTCH3-203ENST00000595514 KIF4BQ2VIQ3 1234 aa13.66□□□□□ -0.22
NOTCH3-203ENST00000595514 CENPFP49454 3210 aa13.66□□□□□ -0.22
NOTCH3-203ENST00000595514 TRIOBPQ9H2D6 2365 aa13.65□□□□□ -0.22
NOTCH3-203ENST00000595514 NTSR2O95665 410 aa13.65□□□□□ -0.22
NOTCH3-203ENST00000595514 AMER1Q5JTC6 1135 aaPredicted RBP13.65□□□□□ -0.22
NOTCH3-203ENST00000595514 PPP1R42Q7Z4L9 355 aa13.65□□□□□ -0.22
NOTCH3-203ENST00000595514 TRIM17Q9Y577 477 aa13.65□□□□□ -0.22
NOTCH3-203ENST00000595514 U2SURPO15042 1029 aaKnown RBP13.64□□□□□ -0.23
NOTCH3-203ENST00000595514 TM4SF4P48230 202 aa13.64□□□□□ -0.23
NOTCH3-203ENST00000595514 DBNDD1Q9H9R9 158 aa13.64□□□□□ -0.23
NOTCH3-203ENST00000595514 EN2P19622 333 aaPredicted RBP13.63□□□□□ -0.23
NOTCH3-203ENST00000595514 SREBF2Q12772 1141 aa13.63□□□□□ -0.23
NOTCH3-203ENST00000595514 TTLL7Q6ZT98 887 aa13.63□□□□□ -0.23
NOTCH3-203ENST00000595514 ZBTB3Q9H5J0 574 aa13.63□□□□□ -0.23
NOTCH3-203ENST00000595514 CUL9Q8IWT3 2517 aa13.63□□□□□ -0.23
NOTCH3-203ENST00000595514 ASTN2O75129 1339 aaPredicted RBP13.63□□□□□ -0.23
NOTCH3-203ENST00000595514 UBE2Q2LH0YL09 131 aa13.62□□□□□ -0.23
NOTCH3-203ENST00000595514 MKRN3Q13064 507 aaKnown RBP13.62□□□□□ -0.23
NOTCH3-203ENST00000595514 WASHC4Q2M389 1173 aa13.62□□□□□ -0.23
NOTCH3-203ENST00000595514 PARP10Q53GL7 1025 aa13.62□□□□□ -0.23
NOTCH3-203ENST00000595514 DDX46Q7L014 1031 aaKnown RBP13.62□□□□□ -0.23
NOTCH3-203ENST00000595514 ZNF34Q8IZ26 560 aa13.62□□□□□ -0.23
NOTCH3-203ENST00000595514 CFHR5Q9BXR6 569 aa13.62□□□□□ -0.23
NOTCH3-203ENST00000595514 KIAA0100Q14667 2235 aaKnown RBP13.62□□□□□ -0.23
NOTCH3-203ENST00000595514 PAPPA2Q9BXP8 1791 aa13.61□□□□□ -0.23
NOTCH3-203ENST00000595514 TTLL12Q14166 644 aaPredicted RBP13.61□□□□□ -0.23
NOTCH3-203ENST00000595514 SLC10A5Q5PT55 438 aa13.61□□□□□ -0.23
NOTCH3-203ENST00000595514 ANGEL2Q5VTE6 544 aaKnown RBP13.61□□□□□ -0.23
NOTCH3-203ENST00000595514 MOB2Q70IA6 237 aa13.61□□□□□ -0.23
NOTCH3-203ENST00000595514 RTF1Q92541 710 aaKnown RBP13.61□□□□□ -0.23
NOTCH3-203ENST00000595514 UTP14AQ9BVJ6 771 aaKnown RBP13.61□□□□□ -0.23
NOTCH3-203ENST00000595514 RRP7AQ9Y3A4 280 aaKnown RBP13.61□□□□□ -0.23
NOTCH3-203ENST00000595514 GRAPQ13588 217 aa13.6□□□□□ -0.23
NOTCH3-203ENST00000595514 CC2D1BQ5T0F9 858 aaKnown RBP13.6□□□□□ -0.23
NOTCH3-203ENST00000595514 OTOP1Q7RTM1 612 aa13.6□□□□□ -0.23
NOTCH3-203ENST00000595514 GRAPLQ8TC17 118 aaPredicted RBP13.6□□□□□ -0.23
NOTCH3-203ENST00000595514 TMEM106CQ9BVX2 250 aa13.6□□□□□ -0.23
NOTCH3-203ENST00000595514 R3HDMLQ9H3Y0 253 aa13.6□□□□□ -0.23
NOTCH3-203ENST00000595514 POLR2AP24928 1970 aaKnown RBP13.6□□□□□ -0.23
NOTCH3-203ENST00000595514 H0YGN5 161 aa13.59□□□□□ -0.23
NOTCH3-203ENST00000595514 RIMBP2O15034 1052 aa13.59□□□□□ -0.23
NOTCH3-203ENST00000595514 ECE2O60344 883 aa13.59□□□□□ -0.23
NOTCH3-203ENST00000595514 ALDH1A1P00352 501 aa13.59□□□□□ -0.23
NOTCH3-203ENST00000595514 MYL6BP14649 208 aa13.59□□□□□ -0.23
NOTCH3-203ENST00000595514 SCARF1Q14162 830 aa13.59□□□□□ -0.23
NOTCH3-203ENST00000595514 MCM10Q7L590 875 aa13.59□□□□□ -0.23
NOTCH3-203ENST00000595514 TMC4Q7Z404 712 aa13.59□□□□□ -0.23
NOTCH3-203ENST00000595514 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
NOTCH3-203ENST00000595514 CEP290O15078 2479 aa13.59□□□□□ -0.23
NOTCH3-203ENST00000595514 RANBP2P49792 3224 aaKnown RBP13.58□□□□□ -0.24
NOTCH3-203ENST00000595514 C6orf229H3BNL8 230 aa13.58□□□□□ -0.24
NOTCH3-203ENST00000595514 DOK7Q18PE1 504 aa13.58□□□□□ -0.24
NOTCH3-203ENST00000595514 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
NOTCH3-203ENST00000595514 GIGYF2Q6Y7W6 1299 aaKnown RBP13.58□□□□□ -0.24
NOTCH3-203ENST00000595514 ARMC5Q96C12 935 aa13.58□□□□□ -0.24
NOTCH3-203ENST00000595514 PHACTR3Q96KR7 559 aa13.58□□□□□ -0.24
NOTCH3-203ENST00000595514 KCNQ5Q9NR82 932 aa13.58□□□□□ -0.24
NOTCH3-203ENST00000595514 NSFL1CQ9UNZ2 370 aaKnown RBP13.58□□□□□ -0.24
NOTCH3-203ENST00000595514 COL6A3P12111 3177 aa13.58□□□□□ -0.24
NOTCH3-203ENST00000595514 RTL9Q8NET4 1388 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms