RNA–Protein interactions for RNA: ENST00000594537.2

LTBP4-211, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-211ENST00000594537 TTLL11Q8NHH1 800 aa28.99■■■□□ 2.23
LTBP4-211ENST00000594537 RPGRQ92834 1020 aaKnown RBP28.99■■■□□ 2.23
LTBP4-211ENST00000594537 KAZALD1Q96I82 304 aa28.99■■■□□ 2.23
LTBP4-211ENST00000594537 ZBTB40Q9NUA8 1239 aa28.99■■■□□ 2.23
LTBP4-211ENST00000594537 DLEC1Q9Y238 1755 aa28.98■■■□□ 2.23
LTBP4-211ENST00000594537 KIAA1551Q9HCM1 1747 aa28.97■■■□□ 2.23
LTBP4-211ENST00000594537 ALDH1B1P30837 517 aa28.97■■■□□ 2.23
LTBP4-211ENST00000594537 KLHL34Q8N239 644 aa28.97■■■□□ 2.23
LTBP4-211ENST00000594537 RBM17Q96I25 401 aaKnown RBP28.97■■■□□ 2.23
LTBP4-211ENST00000594537 CRAMP1Q96RY5 1269 aa28.97■■■□□ 2.23
LTBP4-211ENST00000594537 SYT17Q9BSW7 474 aa28.97■■■□□ 2.23
LTBP4-211ENST00000594537 BICC1Q9H694 974 aaKnown RBP28.97■■■□□ 2.23
LTBP4-211ENST00000594537 LRRFIP2Q9Y608 721 aaKnown RBP28.97■■■□□ 2.23
LTBP4-211ENST00000594537 C3orf67Q6ZVT6 689 aa28.96■■■□□ 2.23
LTBP4-211ENST00000594537 DDX46Q7L014 1031 aaKnown RBP28.96■■■□□ 2.23
LTBP4-211ENST00000594537 CNKSR1Q969H4 720 aa28.96■■■□□ 2.23
LTBP4-211ENST00000594537 MTX1Q13505 466 aa28.95■■■□□ 2.22
LTBP4-211ENST00000594537 LMBR1LQ6UX01 489 aa28.95■■■□□ 2.22
LTBP4-211ENST00000594537 COL11A2P13942 1736 aaPredicted RBP28.94■■■□□ 2.22
LTBP4-211ENST00000594537 DPEP1P16444 411 aa28.94■■■□□ 2.22
LTBP4-211ENST00000594537 EPHA10Q5JZY3 1008 aa28.94■■■□□ 2.22
LTBP4-211ENST00000594537 ANKRD44Q8N8A2 993 aa28.94■■■□□ 2.22
LTBP4-211ENST00000594537 CRBNQ96SW2 442 aa28.94■■■□□ 2.22
LTBP4-211ENST00000594537 KCNA3P22001 575 aa28.92■■■□□ 2.22
LTBP4-211ENST00000594537 CHRNA5P30532 468 aa28.92■■■□□ 2.22
LTBP4-211ENST00000594537 CDC5LQ99459 802 aaKnown RBP28.92■■■□□ 2.22
LTBP4-211ENST00000594537 PIM2Q9P1W9 311 aa28.92■■■□□ 2.22
LTBP4-211ENST00000594537 A0A0G2JLW4 131 aa28.91■■■□□ 2.22
LTBP4-211ENST00000594537 IFIT5Q13325 482 aaKnown RBP28.91■■■□□ 2.22
LTBP4-211ENST00000594537 CCDC57Q2TAC2 916 aa28.91■■■□□ 2.22
LTBP4-211ENST00000594537 TMC4Q7Z404 712 aa28.91■■■□□ 2.22
LTBP4-211ENST00000594537 GREM2Q9H772 168 aa28.91■■■□□ 2.22
LTBP4-211ENST00000594537 BBOX1O75936 387 aa28.9■■■□□ 2.22
LTBP4-211ENST00000594537 GRAPQ13588 217 aa28.9■■■□□ 2.22
LTBP4-211ENST00000594537 GRAPLQ8TC17 118 aaPredicted RBP28.9■■■□□ 2.22
LTBP4-211ENST00000594537 ZNF622Q969S3 477 aaKnown RBP eCLIP28.9■■■□□ 2.22
LTBP4-211ENST00000594537 ANKRD18BA2A2Z9 1011 aa28.89■■■□□ 2.22
LTBP4-211ENST00000594537 ITGA6P23229 1130 aa28.89■■■□□ 2.22
LTBP4-211ENST00000594537 FAM161AQ3B820 660 aa28.89■■■□□ 2.22
LTBP4-211ENST00000594537 RPAP2Q8IXW5 612 aaPredicted RBP28.89■■■□□ 2.22
LTBP4-211ENST00000594537 TTLL6Q8N841 843 aa28.89■■■□□ 2.22
LTBP4-211ENST00000594537 NLGN2Q8NFZ4 835 aa28.89■■■□□ 2.22
LTBP4-211ENST00000594537 CHMP3Q9Y3E7 222 aa28.88■■■□□ 2.21
LTBP4-211ENST00000594537 BRCA1P38398 1863 aaKnown RBP28.88■■■□□ 2.21
LTBP4-211ENST00000594537 RPS8P62241 208 aaKnown RBP28.86■■■□□ 2.21
LTBP4-211ENST00000594537 ATP8B2P98198 1209 aa28.86■■■□□ 2.21
LTBP4-211ENST00000594537 DALRD3Q5D0E6 543 aaKnown RBP28.86■■■□□ 2.21
LTBP4-211ENST00000594537 CEP85Q6P2H3 762 aa28.85■■■□□ 2.21
LTBP4-211ENST00000594537 ANKRD18AQ8IVF6 992 aa28.85■■■□□ 2.21
LTBP4-211ENST00000594537 CCDC85AQ96PX6 553 aaPredicted RBP28.85■■■□□ 2.21
LTBP4-211ENST00000594537 FBXO3Q9UK99 471 aa28.85■■■□□ 2.21
LTBP4-211ENST00000594537 SRGAP3O43295 1099 aa28.84■■■□□ 2.21
LTBP4-211ENST00000594537 NEFLP07196 543 aa28.84■■■□□ 2.21
LTBP4-211ENST00000594537 IGHMBP2P38935 993 aaKnown RBP28.84■■■□□ 2.21
LTBP4-211ENST00000594537 CC2D2BQ6DHV5 1058 aa28.84■■■□□ 2.21
LTBP4-211ENST00000594537 PRPF40BQ6NWY9 871 aaKnown RBP28.84■■■□□ 2.21
LTBP4-211ENST00000594537 C1orf115Q9H7X2 142 aa28.84■■■□□ 2.21
LTBP4-211ENST00000594537 SEC31BQ9NQW1 1179 aa28.84■■■□□ 2.21
LTBP4-211ENST00000594537 GRIPAP1Q4V328 841 aa28.83■■■□□ 2.21
LTBP4-211ENST00000594537 TAF7LQ5H9L4 462 aa28.83■■■□□ 2.21
LTBP4-211ENST00000594537 SOGA3Q5TF21 947 aa28.83■■■□□ 2.21
LTBP4-211ENST00000594537 HMMRO75330 724 aa28.82■■■□□ 2.2
LTBP4-211ENST00000594537 EXOC6Q8TAG9 804 aa28.82■■■□□ 2.2
LTBP4-211ENST00000594537 SSH3Q8TE77 659 aa28.82■■■□□ 2.2
LTBP4-211ENST00000594537 CELF1Q92879 486 aaKnown RBP28.82■■■□□ 2.2
LTBP4-211ENST00000594537 BSDC1Q9NW68 430 aaPredicted RBP28.82■■■□□ 2.2
LTBP4-211ENST00000594537 PPEF1O14829 653 aaPredicted RBP28.81■■■□□ 2.2
LTBP4-211ENST00000594537 RFX5P48382 616 aaPredicted RBP28.81■■■□□ 2.2
LTBP4-211ENST00000594537 POLA2Q14181 598 aa28.81■■■□□ 2.2
LTBP4-211ENST00000594537 TMX4Q9H1E5 349 aaPredicted RBP28.81■■■□□ 2.2
LTBP4-211ENST00000594537 COPRSQ9NQ92 184 aa28.81■■■□□ 2.2
LTBP4-211ENST00000594537 SP8Q8IXZ3 490 aa28.8■■■□□ 2.2
LTBP4-211ENST00000594537 MPHOSPH8Q99549 860 aa28.8■■■□□ 2.2
LTBP4-211ENST00000594537 ATP6V0A2Q9Y487 856 aa28.8■■■□□ 2.2
LTBP4-211ENST00000594537 SRCAPQ6ZRS2 3230 aa28.79■■■□□ 2.2
LTBP4-211ENST00000594537 PNMA6EA0A0J9YXQ4 647 aa28.78■■■□□ 2.2
LTBP4-211ENST00000594537 PTPN12Q05209 780 aaKnown RBP28.78■■■□□ 2.2
LTBP4-211ENST00000594537 C7orf43Q8WVR3 580 aa28.78■■■□□ 2.2
LTBP4-211ENST00000594537 SLX4Q8IY92 1834 aa28.78■■■□□ 2.2
LTBP4-211ENST00000594537 ARFGEF1Q9Y6D6 1849 aa28.78■■■□□ 2.2
LTBP4-211ENST00000594537 LDHAL6AQ6ZMR3 332 aa28.77■■■□□ 2.2
LTBP4-211ENST00000594537 BCS1LQ9Y276 419 aa28.77■■■□□ 2.2
LTBP4-211ENST00000594537 CIAO1O76071 339 aa28.76■■■□□ 2.19
LTBP4-211ENST00000594537 IRX6P78412 446 aaPredicted RBP28.76■■■□□ 2.19
LTBP4-211ENST00000594537 LRRC37AA6NMS7 1700 aa28.76■■■□□ 2.19
LTBP4-211ENST00000594537 ERICH6BQ5W0A0 696 aa28.74■■■□□ 2.19
LTBP4-211ENST00000594537 CNNM1Q9NRU3 951 aa28.74■■■□□ 2.19
LTBP4-211ENST00000594537 TAF1P21675 1872 aa28.74■■■□□ 2.19
LTBP4-211ENST00000594537 CACNA1SQ13698 1873 aa28.74■■■□□ 2.19
LTBP4-211ENST00000594537 EYA2O00167 538 aa28.73■■■□□ 2.19
LTBP4-211ENST00000594537 CCDC93Q567U6 631 aa28.73■■■□□ 2.19
LTBP4-211ENST00000594537 SIRT2Q8IXJ6 389 aa28.73■■■□□ 2.19
LTBP4-211ENST00000594537 RTKN2Q8IZC4 609 aa28.73■■■□□ 2.19
LTBP4-211ENST00000594537 ZNF594Q96JF6 807 aaPredicted RBP28.73■■■□□ 2.19
LTBP4-211ENST00000594537 ANKRD2Q9GZV1 360 aa28.73■■■□□ 2.19
LTBP4-211ENST00000594537 NOP58Q9Y2X3 529 aaKnown RBP28.73■■■□□ 2.19
LTBP4-211ENST00000594537 PCDHB15Q9Y5E8 787 aa28.73■■■□□ 2.19
LTBP4-211ENST00000594537 COL4A1P02462 1669 aa28.72■■■□□ 2.19
LTBP4-211ENST00000594537 MROH5Q6ZUA9 1318 aa28.71■■■□□ 2.19
LTBP4-211ENST00000594537 C21orf2O43822 256 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms