RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ANKRD1Q15327 319 aa19.59■□□□□ 0.73
LIG1-206ENST00000594067 METTL22Q9BUU2 404 aaPredicted RBP19.59■□□□□ 0.73
LIG1-206ENST00000594067 NLRP2Q9NX02 1062 aa19.59■□□□□ 0.73
LIG1-206ENST00000594067 ERBB3P21860 1342 aa19.59■□□□□ 0.73
LIG1-206ENST00000594067 TAF5LO75529 589 aa19.59■□□□□ 0.73
LIG1-206ENST00000594067 LIG1P18858 919 aa19.59■□□□□ 0.73
LIG1-206ENST00000594067 ZNF496Q96IT1 587 aaPredicted RBP19.59■□□□□ 0.73
LIG1-206ENST00000594067 DBNLQ9UJU6 430 aaKnown RBP19.59■□□□□ 0.73
LIG1-206ENST00000594067 CHGBP05060 677 aa19.58■□□□□ 0.73
LIG1-206ENST00000594067 PDCP20941 246 aa19.58■□□□□ 0.73
LIG1-206ENST00000594067 KLHL34Q8N239 644 aa19.58■□□□□ 0.73
LIG1-206ENST00000594067 USP16Q9Y5T5 823 aa19.58■□□□□ 0.73
LIG1-206ENST00000594067 NPHP3Q7Z494 1330 aa19.58■□□□□ 0.72
LIG1-206ENST00000594067 SIPA1L3O60292 1781 aaPredicted RBP19.58■□□□□ 0.72
LIG1-206ENST00000594067 TFCP2Q12800 502 aa19.58■□□□□ 0.72
LIG1-206ENST00000594067 CAMK4Q16566 473 aa19.58■□□□□ 0.72
LIG1-206ENST00000594067 TFIP11Q9UBB9 837 aaKnown RBP19.58■□□□□ 0.72
LIG1-206ENST00000594067 ANKRD13DQ6ZTN6 518 aa19.57■□□□□ 0.72
LIG1-206ENST00000594067 KDM6AO15550 1401 aaPredicted RBP19.57■□□□□ 0.72
LIG1-206ENST00000594067 CCDC192P0DO97 292 aa19.57■□□□□ 0.72
LIG1-206ENST00000594067 HMG20BQ9P0W2 317 aa19.57■□□□□ 0.72
LIG1-206ENST00000594067 COL15A1P39059 1388 aa19.56■□□□□ 0.72
LIG1-206ENST00000594067 PHKG2P15735 406 aa19.56■□□□□ 0.72
LIG1-206ENST00000594067 PTPN12Q05209 780 aaKnown RBP19.56■□□□□ 0.72
LIG1-206ENST00000594067 TNNI3KQ59H18 835 aa19.56■□□□□ 0.72
LIG1-206ENST00000594067 CCDC129Q6ZRS4 1044 aa19.56■□□□□ 0.72
LIG1-206ENST00000594067 COPRSQ9NQ92 184 aa19.56■□□□□ 0.72
LIG1-206ENST00000594067 FPGT-TNNI3KV9GXZ4 949 aa19.56■□□□□ 0.72
LIG1-206ENST00000594067 RFX5P48382 616 aaPredicted RBP19.56■□□□□ 0.72
LIG1-206ENST00000594067 DNAJC2Q99543 621 aaKnown RBP19.56■□□□□ 0.72
LIG1-206ENST00000594067 ALDH8A1Q9H2A2 487 aaPredicted RBP19.56■□□□□ 0.72
LIG1-206ENST00000594067 ATP5J2-PTCD1G3V325 749 aa19.55■□□□□ 0.72
LIG1-206ENST00000594067 PTCD1O75127 700 aaKnown RBP19.55■□□□□ 0.72
LIG1-206ENST00000594067 ATP5JP18859 108 aa19.55■□□□□ 0.72
LIG1-206ENST00000594067 UBE3BQ7Z3V4 1068 aa19.55■□□□□ 0.72
LIG1-206ENST00000594067 KIAA1524Q8TCG1 905 aa19.55■□□□□ 0.72
LIG1-206ENST00000594067 SEC62Q99442 399 aaKnown RBP19.55■□□□□ 0.72
LIG1-206ENST00000594067 NUP62CLQ9H1M0 184 aa19.55■□□□□ 0.72
LIG1-206ENST00000594067 JCADQ9P266 1359 aa19.55■□□□□ 0.72
LIG1-206ENST00000594067 TATP17735 454 aaPredicted RBP19.55■□□□□ 0.72
LIG1-206ENST00000594067 KCNF1Q9H3M0 494 aa19.55■□□□□ 0.72
LIG1-206ENST00000594067 CCDC9Q9Y3X0 531 aaKnown RBP19.55■□□□□ 0.72
LIG1-206ENST00000594067 JAK2O60674 1132 aa19.54■□□□□ 0.72
LIG1-206ENST00000594067 MAP3K11Q16584 847 aa19.54■□□□□ 0.72
LIG1-206ENST00000594067 TSGA10IPQ3SY00 556 aa19.54■□□□□ 0.72
LIG1-206ENST00000594067 KIF3AQ9Y496 699 aa19.54■□□□□ 0.72
LIG1-206ENST00000594067 CAMTA1Q9Y6Y1 1673 aa19.54■□□□□ 0.72
LIG1-206ENST00000594067 ELP1O95163 1332 aa19.54■□□□□ 0.72
LIG1-206ENST00000594067 C5P01031 1676 aa19.54■□□□□ 0.72
LIG1-206ENST00000594067 SPC24Q8NBT2 197 aa19.54■□□□□ 0.72
LIG1-206ENST00000594067 SPATA32Q96LK8 384 aa19.54■□□□□ 0.72
LIG1-206ENST00000594067 DBNDD2Q9BQY9 259 aa19.54■□□□□ 0.72
LIG1-206ENST00000594067 MRC1P22897 1456 aa19.53■□□□□ 0.72
LIG1-206ENST00000594067 PDIA4P13667 645 aaKnown RBP19.53■□□□□ 0.72
LIG1-206ENST00000594067 USPL1Q5W0Q7 1092 aa19.53■□□□□ 0.72
LIG1-206ENST00000594067 LRP10Q7Z4F1 713 aa19.53■□□□□ 0.72
LIG1-206ENST00000594067 CKAP2LQ8IYA6 745 aa19.53■□□□□ 0.72
LIG1-206ENST00000594067 NEK1Q96PY6 1258 aa19.53■□□□□ 0.72
LIG1-206ENST00000594067 DACT1Q9NYF0 836 aa19.53■□□□□ 0.72
LIG1-206ENST00000594067 GOLGA6L4A6NEF3 574 aa19.53■□□□□ 0.72
LIG1-206ENST00000594067 FAM177BA6PVY3 158 aa19.53■□□□□ 0.72
LIG1-206ENST00000594067 TTC5Q8N0Z6 440 aa19.53■□□□□ 0.72
LIG1-206ENST00000594067 Q6ZUG5 572 aa19.52■□□□□ 0.72
LIG1-206ENST00000594067 SCAND2PQ9GZW5 306 aaPredicted RBP19.52■□□□□ 0.72
LIG1-206ENST00000594067 PYCARDQ9ULZ3 195 aa19.52■□□□□ 0.72
LIG1-206ENST00000594067 ADAMTS7Q9UKP4 1686 aa19.52■□□□□ 0.72
LIG1-206ENST00000594067 RGPD5Q99666 1765 aa19.52■□□□□ 0.72
LIG1-206ENST00000594067 SNRPA1P09661 255 aaKnown RBP19.52■□□□□ 0.72
LIG1-206ENST00000594067 TYRO3Q06418 890 aa19.52■□□□□ 0.72
LIG1-206ENST00000594067 LEO1Q8WVC0 666 aaPredicted RBP19.52■□□□□ 0.72
LIG1-206ENST00000594067 MRVI1Q9Y6F6 885 aa19.52■□□□□ 0.72
LIG1-206ENST00000594067 A0A087WZG4 1122 aa19.51■□□□□ 0.71
LIG1-206ENST00000594067 HSP90B1P14625 803 aaKnown RBP19.51■□□□□ 0.71
LIG1-206ENST00000594067 KRT32Q14532 448 aa19.51■□□□□ 0.71
LIG1-206ENST00000594067 DDX46Q7L014 1031 aaKnown RBP19.51■□□□□ 0.71
LIG1-206ENST00000594067 LRRC2Q9BYS8 371 aa19.51■□□□□ 0.71
LIG1-206ENST00000594067 TNMDQ9H2S6 317 aa19.51■□□□□ 0.71
LIG1-206ENST00000594067 PRDM10Q9NQV6 1147 aa19.51■□□□□ 0.71
LIG1-206ENST00000594067 ZNF609O15014 1411 aa19.51■□□□□ 0.71
LIG1-206ENST00000594067 CSB-PGBD3P0DP91 1061 aa19.51■□□□□ 0.71
LIG1-206ENST00000594067 PROSER2Q86WR7 435 aaPredicted RBP19.51■□□□□ 0.71
LIG1-206ENST00000594067 IFNL2Q8IZJ0 200 aa19.51■□□□□ 0.71
LIG1-206ENST00000594067 FAM200AQ8TCP9 573 aa19.51■□□□□ 0.71
LIG1-206ENST00000594067 GTF3C6Q969F1 213 aa19.51■□□□□ 0.71
LIG1-206ENST00000594067 LUZP1Q86V48 1076 aa19.5■□□□□ 0.71
LIG1-206ENST00000594067 DDX11Q96FC9 970 aa19.5■□□□□ 0.71
LIG1-206ENST00000594067 BCL2L12Q9HB09 334 aa19.5■□□□□ 0.71
LIG1-206ENST00000594067 CYP21A2P08686 494 aa19.5■□□□□ 0.71
LIG1-206ENST00000594067 RABL6Q3YEC7 729 aaPredicted RBP19.5■□□□□ 0.71
LIG1-206ENST00000594067 DDX17Q92841 729 aaKnown RBP19.5■□□□□ 0.71
LIG1-206ENST00000594067 BRF1Q92994 677 aa19.5■□□□□ 0.71
LIG1-206ENST00000594067 LMTK3Q96Q04 1460 aa19.5■□□□□ 0.71
LIG1-206ENST00000594067 MEGF6O75095 1541 aa19.49■□□□□ 0.71
LIG1-206ENST00000594067 TPM3P06753 285 aa19.49■□□□□ 0.71
LIG1-206ENST00000594067 MCMDC2Q4G0Z9 681 aa19.49■□□□□ 0.71
LIG1-206ENST00000594067 U3KPZ7 1027 aaPredicted RBP19.49■□□□□ 0.71
LIG1-206ENST00000594067 TRPM3Q9HCF6 1732 aaPredicted RBP19.49■□□□□ 0.71
LIG1-206ENST00000594067 TRHP20396 242 aaPredicted RBP19.48■□□□□ 0.71
LIG1-206ENST00000594067 SLFNL1Q499Z3 407 aa19.48■□□□□ 0.71
LIG1-206ENST00000594067 PGBD1Q96JS3 809 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms