RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 RAB11FIP4Q86YS3 637 aa17.77■□□□□ 0.43
SYMPK-202ENST00000593504 AK7Q96M32 723 aa17.77■□□□□ 0.43
SYMPK-202ENST00000593504 USP44Q9H0E7 712 aa17.77■□□□□ 0.43
SYMPK-202ENST00000593504 HMGB2P26583 209 aaKnown RBP17.77■□□□□ 0.43
SYMPK-202ENST00000593504 IQCA1Q86XH1 822 aa17.77■□□□□ 0.43
SYMPK-202ENST00000593504 POLR3DP05423 398 aaPredicted RBP17.76■□□□□ 0.43
SYMPK-202ENST00000593504 FILIP1LQ4L180 1135 aa17.76■□□□□ 0.43
SYMPK-202ENST00000593504 UTP14AQ9BVJ6 771 aaKnown RBP17.76■□□□□ 0.43
SYMPK-202ENST00000593504 MKNK2Q9HBH9 465 aa17.76■□□□□ 0.43
SYMPK-202ENST00000593504 DACH1Q9UI36 760 aa17.76■□□□□ 0.43
SYMPK-202ENST00000593504 MCM5P33992 734 aa17.76■□□□□ 0.43
SYMPK-202ENST00000593504 TMEM67Q5HYA8 995 aa17.76■□□□□ 0.43
SYMPK-202ENST00000593504 CCDC43Q96MW1 224 aaKnown RBP17.76■□□□□ 0.43
SYMPK-202ENST00000593504 UBAP1LF5GYI3 381 aa17.76■□□□□ 0.43
SYMPK-202ENST00000593504 NBPF5PQ86XG9 351 aaPredicted RBP17.76■□□□□ 0.43
SYMPK-202ENST00000593504 A1BGP04217 495 aa17.76■□□□□ 0.43
SYMPK-202ENST00000593504 MTERF4Q7Z6M4 381 aaKnown RBP17.75■□□□□ 0.43
SYMPK-202ENST00000593504 KAT6BQ8WYB5 2073 aa17.75■□□□□ 0.43
SYMPK-202ENST00000593504 RAD50Q92878 1312 aa17.75■□□□□ 0.43
SYMPK-202ENST00000593504 SSRP1Q08945 709 aaKnown RBP17.75■□□□□ 0.43
SYMPK-202ENST00000593504 GCKRQ14397 625 aa17.75■□□□□ 0.43
SYMPK-202ENST00000593504 Q6ZUG5 572 aa17.75■□□□□ 0.43
SYMPK-202ENST00000593504 C8orf37Q96NL8 207 aa17.75■□□□□ 0.43
SYMPK-202ENST00000593504 ORC3Q9UBD5 711 aaPredicted RBP17.75■□□□□ 0.43
SYMPK-202ENST00000593504 UBE2HP62256 183 aa17.75■□□□□ 0.43
SYMPK-202ENST00000593504 ANKRD18AQ8IVF6 992 aa17.75■□□□□ 0.43
SYMPK-202ENST00000593504 CCDC144CPQ8IYA2 1237 aa17.75■□□□□ 0.43
SYMPK-202ENST00000593504 PHKG2P15735 406 aa17.75■□□□□ 0.43
SYMPK-202ENST00000593504 SLC9C2Q5TAH2 1124 aa17.75■□□□□ 0.43
SYMPK-202ENST00000593504 ZSCAN29Q8IWY8 852 aaPredicted RBP17.75■□□□□ 0.43
SYMPK-202ENST00000593504 CEP131Q9UPN4 1083 aa17.75■□□□□ 0.43
SYMPK-202ENST00000593504 RNF113AO15541 343 aaKnown RBP17.74■□□□□ 0.43
SYMPK-202ENST00000593504 RFC4P35249 363 aa17.74■□□□□ 0.43
SYMPK-202ENST00000593504 MFSD6Q6ZSS7 791 aa17.74■□□□□ 0.43
SYMPK-202ENST00000593504 CTCFLQ8NI51 663 aaPredicted RBP17.74■□□□□ 0.43
SYMPK-202ENST00000593504 ZNF287Q9HBT7 754 aa17.74■□□□□ 0.43
SYMPK-202ENST00000593504 DIP2CQ9Y2E4 1556 aa17.74■□□□□ 0.43
SYMPK-202ENST00000593504 TMEM94Q12767 1356 aa17.74■□□□□ 0.43
SYMPK-202ENST00000593504 ARHGEF25Q86VW2 580 aa17.74■□□□□ 0.43
SYMPK-202ENST00000593504 MICU3Q86XE3 530 aa17.74■□□□□ 0.43
SYMPK-202ENST00000593504 CKAP2LQ8IYA6 745 aa17.74■□□□□ 0.43
SYMPK-202ENST00000593504 ZSCAN23Q3MJ62 389 aa17.74■□□□□ 0.43
SYMPK-202ENST00000593504 FAM89AQ96GI7 184 aa17.74■□□□□ 0.43
SYMPK-202ENST00000593504 A0A0U1RQG5 324 aaPredicted RBP17.74■□□□□ 0.43
SYMPK-202ENST00000593504 TNNI3KQ59H18 835 aa17.74■□□□□ 0.43
SYMPK-202ENST00000593504 BCL11BQ9C0K0 894 aaPredicted RBP17.74■□□□□ 0.43
SYMPK-202ENST00000593504 FPGT-TNNI3KV9GXZ4 949 aa17.74■□□□□ 0.43
SYMPK-202ENST00000593504 CCDC171Q6TFL3 1326 aa17.73■□□□□ 0.43
SYMPK-202ENST00000593504 KLF18A0A0U1RQI7 1052 aa17.73■□□□□ 0.43
SYMPK-202ENST00000593504 SF3B2Q13435 895 aaKnown RBP17.73■□□□□ 0.43
SYMPK-202ENST00000593504 IQSEC3Q9UPP2 1182 aaPredicted RBP17.73■□□□□ 0.43
SYMPK-202ENST00000593504 GSPT1P15170 499 aaKnown RBP17.73■□□□□ 0.43
SYMPK-202ENST00000593504 METAP2P50579 478 aaKnown RBP eCLIP17.73■□□□□ 0.434e-7■■■□□ 15.1
SYMPK-202ENST00000593504 CCDC191Q8NCU4 936 aa17.73■□□□□ 0.43
SYMPK-202ENST00000593504 CNPY2Q9Y2B0 182 aa17.73■□□□□ 0.43
SYMPK-202ENST00000593504 IARSP41252 1262 aaKnown RBP17.73■□□□□ 0.43
SYMPK-202ENST00000593504 DDX19AQ9NUU7 478 aaKnown RBP17.73■□□□□ 0.43
SYMPK-202ENST00000593504 ZSCAN30Q86W11 494 aa17.72■□□□□ 0.43
SYMPK-202ENST00000593504 GOLGA6L1Q8N7Z2 621 aa17.72■□□□□ 0.43
SYMPK-202ENST00000593504 MNS1Q8NEH6 495 aa17.72■□□□□ 0.43
SYMPK-202ENST00000593504 HELBQ8NG08 1087 aaPredicted RBP17.72■□□□□ 0.43
SYMPK-202ENST00000593504 LMTK3Q96Q04 1460 aa17.72■□□□□ 0.43
SYMPK-202ENST00000593504 EYA2O00167 538 aa17.72■□□□□ 0.43
SYMPK-202ENST00000593504 CEP89Q96ST8 783 aa17.72■□□□□ 0.43
SYMPK-202ENST00000593504 TIMM10P62072 90 aa17.72■□□□□ 0.43
SYMPK-202ENST00000593504 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
SYMPK-202ENST00000593504 SETDB2Q96T68 719 aa17.72■□□□□ 0.43
SYMPK-202ENST00000593504 MAGEC2Q9UBF1 373 aaPredicted RBP17.72■□□□□ 0.43
SYMPK-202ENST00000593504 RUFY3Q7L099 469 aa17.72■□□□□ 0.43
SYMPK-202ENST00000593504 DBNDD2Q9BQY9 259 aa17.72■□□□□ 0.43
SYMPK-202ENST00000593504 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
SYMPK-202ENST00000593504 FSIP1Q8NA03 581 aa17.71■□□□□ 0.43
SYMPK-202ENST00000593504 INTS4Q96HW7 963 aaKnown RBP17.71■□□□□ 0.43
SYMPK-202ENST00000593504 TULP4Q9NRJ4 1543 aa17.71■□□□□ 0.43
SYMPK-202ENST00000593504 USP48Q86UV5 1035 aa17.71■□□□□ 0.43
SYMPK-202ENST00000593504 F13A1P00488 732 aa17.71■□□□□ 0.43
SYMPK-202ENST00000593504 CPA1P15085 419 aa17.71■□□□□ 0.43
SYMPK-202ENST00000593504 CATIPQ7Z7H3 387 aa17.71■□□□□ 0.43
SYMPK-202ENST00000593504 ZNF444Q8N0Y2 327 aaPredicted RBP17.71■□□□□ 0.42
SYMPK-202ENST00000593504 ZSCAN16Q9H4T2 348 aaPredicted RBP17.71■□□□□ 0.42
SYMPK-202ENST00000593504 ANO10Q9NW15 660 aa17.71■□□□□ 0.42
SYMPK-202ENST00000593504 SMTNL1A8MU46 457 aa17.7■□□□□ 0.42
SYMPK-202ENST00000593504 SGSM2O43147 1006 aa17.7■□□□□ 0.42
SYMPK-202ENST00000593504 BEND3Q5T5X7 828 aa17.7■□□□□ 0.42
SYMPK-202ENST00000593504 FILIP1Q7Z7B0 1213 aa17.7■□□□□ 0.42
SYMPK-202ENST00000593504 NEURL1BA8MQ27 555 aa17.7■□□□□ 0.42
SYMPK-202ENST00000593504 CYP7A1P22680 504 aa17.7■□□□□ 0.42
SYMPK-202ENST00000593504 PPP1R1BQ9UD71 204 aaPredicted RBP17.7■□□□□ 0.42
SYMPK-202ENST00000593504 KDRP35968 1356 aa17.7■□□□□ 0.42
SYMPK-202ENST00000593504 CCDC70Q6NSX1 233 aa17.7■□□□□ 0.42
SYMPK-202ENST00000593504 CBFA2T2O43439 604 aa17.7■□□□□ 0.42
SYMPK-202ENST00000593504 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
SYMPK-202ENST00000593504 A0A1B0GUL7 405 aa17.69■□□□□ 0.42
SYMPK-202ENST00000593504 C6orf229H3BNL8 230 aa17.69■□□□□ 0.42
SYMPK-202ENST00000593504 CTAGE5O15320 804 aa17.69■□□□□ 0.42
SYMPK-202ENST00000593504 SLC4A4Q9Y6R1 1079 aa17.69■□□□□ 0.42
SYMPK-202ENST00000593504 KIDINS220Q9ULH0 1771 aa17.69■□□□□ 0.42
SYMPK-202ENST00000593504 ZNF771Q7L3S4 317 aaPredicted RBP17.69■□□□□ 0.42
SYMPK-202ENST00000593504 USP25Q9UHP3 1055 aa17.69■□□□□ 0.42
SYMPK-202ENST00000593504 ZNF594Q96JF6 807 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms