RNA–Protein interactions for RNA: ENST00000593361.5

DDX49-202, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-202ENST00000593361 C2CD5Q86YS7 1000 aa16.23■□□□□ 0.19
DDX49-202ENST00000593361 BICC1Q9H694 974 aaKnown RBP16.23■□□□□ 0.19
DDX49-202ENST00000593361 HDAC5Q9UQL6 1122 aa16.23■□□□□ 0.19
DDX49-202ENST00000593361 SPEF2Q9C093 1822 aa16.22■□□□□ 0.19
DDX49-202ENST00000593361 H0YIN7 160 aa16.22■□□□□ 0.19
DDX49-202ENST00000593361 GNAI2P04899 355 aa16.22■□□□□ 0.19
DDX49-202ENST00000593361 TGFB2P61812 414 aa16.22■□□□□ 0.19
DDX49-202ENST00000593361 FOXO4P98177 505 aa16.22■□□□□ 0.19
DDX49-202ENST00000593361 SF3B3Q15393 1217 aaKnown RBP16.22■□□□□ 0.19
DDX49-202ENST00000593361 CCDC152Q4G0S7 254 aa16.22■□□□□ 0.19
DDX49-202ENST00000593361 NLGN2Q8NFZ4 835 aa16.22■□□□□ 0.19
DDX49-202ENST00000593361 RPGRQ92834 1020 aaKnown RBP16.22■□□□□ 0.19
DDX49-202ENST00000593361 CCDC85AQ96PX6 553 aaPredicted RBP16.22■□□□□ 0.19
DDX49-202ENST00000593361 CHMP4BQ9H444 224 aaKnown RBP16.22■□□□□ 0.19
DDX49-202ENST00000593361 C1orf115Q9H7X2 142 aa16.22■□□□□ 0.19
DDX49-202ENST00000593361 PDZRN3Q9UPQ7 1066 aa16.22■□□□□ 0.19
DDX49-202ENST00000593361 SRGNP10124 158 aa16.21■□□□□ 0.19
DDX49-202ENST00000593361 DPEP1P16444 411 aa16.21■□□□□ 0.19
DDX49-202ENST00000593361 FAM161AQ3B820 660 aa16.21■□□□□ 0.19
DDX49-202ENST00000593361 ANKRD44Q8N8A2 993 aa16.21■□□□□ 0.19
DDX49-202ENST00000593361 TTLL11Q8NHH1 800 aa16.21■□□□□ 0.19
DDX49-202ENST00000593361 COL4A1P02462 1669 aa16.21■□□□□ 0.18
DDX49-202ENST00000593361 A0A0G2JLW4 131 aa16.2■□□□□ 0.18
DDX49-202ENST00000593361 NPR1P16066 1061 aa16.2■□□□□ 0.18
DDX49-202ENST00000593361 RABL6Q3YEC7 729 aaPredicted RBP16.2■□□□□ 0.18
DDX49-202ENST00000593361 LMBR1LQ6UX01 489 aa16.2■□□□□ 0.18
DDX49-202ENST00000593361 MASTLQ96GX5 879 aa16.2■□□□□ 0.18
DDX49-202ENST00000593361 SYT17Q9BSW7 474 aa16.2■□□□□ 0.18
DDX49-202ENST00000593361 GREM2Q9H772 168 aa16.2■□□□□ 0.18
DDX49-202ENST00000593361 ZBTB40Q9NUA8 1239 aa16.2■□□□□ 0.18
DDX49-202ENST00000593361 CHMP3Q9Y3E7 222 aa16.2■□□□□ 0.18
DDX49-202ENST00000593361 RTL9Q8NET4 1388 aa16.2■□□□□ 0.18
DDX49-202ENST00000593361 CSF1RP07333 972 aa16.19■□□□□ 0.18
DDX49-202ENST00000593361 STYK1Q6J9G0 422 aa16.19■□□□□ 0.18
DDX49-202ENST00000593361 ZNF622Q969S3 477 aaKnown RBP eCLIP16.19■□□□□ 0.18
DDX49-202ENST00000593361 PPP4R2Q9NY27 417 aa16.19■□□□□ 0.18
DDX49-202ENST00000593361 SLX4Q8IY92 1834 aa16.19■□□□□ 0.18
DDX49-202ENST00000593361 HOXA10P31260 410 aaPredicted RBP16.18■□□□□ 0.18
DDX49-202ENST00000593361 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
DDX49-202ENST00000593361 EXOC6Q8TAG9 804 aa16.18■□□□□ 0.18
DDX49-202ENST00000593361 RBM17Q96I25 401 aaKnown RBP16.18■□□□□ 0.18
DDX49-202ENST00000593361 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
DDX49-202ENST00000593361 KCNA3P22001 575 aa16.17■□□□□ 0.18
DDX49-202ENST00000593361 ITGA6P23229 1130 aa16.17■□□□□ 0.18
DDX49-202ENST00000593361 CRAMP1Q96RY5 1269 aa16.17■□□□□ 0.18
DDX49-202ENST00000593361 IFIT5Q13325 482 aaKnown RBP16.16■□□□□ 0.18
DDX49-202ENST00000593361 MTX1Q13505 466 aa16.16■□□□□ 0.18
DDX49-202ENST00000593361 GRAPQ13588 217 aa16.16■□□□□ 0.18
DDX49-202ENST00000593361 CCDC57Q2TAC2 916 aa16.16■□□□□ 0.18
DDX49-202ENST00000593361 GRAPLQ8TC17 118 aaPredicted RBP16.16■□□□□ 0.18
DDX49-202ENST00000593361 CNKSR1Q969H4 720 aa16.16■□□□□ 0.18
DDX49-202ENST00000593361 CDC5LQ99459 802 aaKnown RBP16.16■□□□□ 0.18
DDX49-202ENST00000593361 PIM2Q9P1W9 311 aa16.16■□□□□ 0.18
DDX49-202ENST00000593361 WWC3Q9ULE0 1092 aa16.16■□□□□ 0.18
DDX49-202ENST00000593361 ARFGEF1Q9Y6D6 1849 aa16.16■□□□□ 0.18
DDX49-202ENST00000593361 LRRC37AA6NMS7 1700 aa16.16■□□□□ 0.18
DDX49-202ENST00000593361 ANKRD18BA2A2Z9 1011 aa16.15■□□□□ 0.18
DDX49-202ENST00000593361 ALDH1B1P30837 517 aa16.15■□□□□ 0.18
DDX49-202ENST00000593361 PRPF40BQ6NWY9 871 aaKnown RBP16.15■□□□□ 0.18
DDX49-202ENST00000593361 CEP85Q6P2H3 762 aa16.15■□□□□ 0.18
DDX49-202ENST00000593361 CELF1Q92879 486 aaKnown RBP16.15■□□□□ 0.18
DDX49-202ENST00000593361 SRGAP3O43295 1099 aa16.14■□□□□ 0.17
DDX49-202ENST00000593361 TAF7LQ5H9L4 462 aa16.14■□□□□ 0.17
DDX49-202ENST00000593361 ANKRD18AQ8IVF6 992 aa16.14■□□□□ 0.17
DDX49-202ENST00000593361 TTLL6Q8N841 843 aa16.14■□□□□ 0.17
DDX49-202ENST00000593361 A0A1B0GUL6 1792 aa16.13■□□□□ 0.17
DDX49-202ENST00000593361 PNMA6EA0A0J9YXQ4 647 aa16.13■□□□□ 0.17
DDX49-202ENST00000593361 PPEF1O14829 653 aaPredicted RBP16.13■□□□□ 0.17
DDX49-202ENST00000593361 AAMPQ13685 434 aa16.13■□□□□ 0.17
DDX49-202ENST00000593361 DALRD3Q5D0E6 543 aaKnown RBP16.13■□□□□ 0.17
DDX49-202ENST00000593361 IGHMBP2P38935 993 aaKnown RBP16.12■□□□□ 0.17
DDX49-202ENST00000593361 RFX5P48382 616 aaPredicted RBP16.12■□□□□ 0.17
DDX49-202ENST00000593361 RPS8P62241 208 aaKnown RBP16.12■□□□□ 0.17
DDX49-202ENST00000593361 ATP8B2P98198 1209 aa16.12■□□□□ 0.17
DDX49-202ENST00000593361 KLHDC4Q8TBB5 520 aa16.12■□□□□ 0.17
DDX49-202ENST00000593361 ZNF594Q96JF6 807 aaPredicted RBP16.12■□□□□ 0.17
DDX49-202ENST00000593361 BCS1LQ9Y276 419 aa16.12■□□□□ 0.17
DDX49-202ENST00000593361 UTRNP46939 3433 aa16.11■□□□□ 0.17
DDX49-202ENST00000593361 BBOX1O75936 387 aa16.11■□□□□ 0.17
DDX49-202ENST00000593361 SLC51AQ86UW1 340 aa16.11■□□□□ 0.17
DDX49-202ENST00000593361 RPAP2Q8IXW5 612 aaPredicted RBP16.11■□□□□ 0.17
DDX49-202ENST00000593361 SSH3Q8TE77 659 aa16.11■□□□□ 0.17
DDX49-202ENST00000593361 MPHOSPH8Q99549 860 aa16.11■□□□□ 0.17
DDX49-202ENST00000593361 PTPN12Q05209 780 aaKnown RBP16.1■□□□□ 0.17
DDX49-202ENST00000593361 POLA2Q14181 598 aa16.1■□□□□ 0.17
DDX49-202ENST00000593361 TMC4Q7Z404 712 aa16.1■□□□□ 0.17
DDX49-202ENST00000593361 SIRT2Q8IXJ6 389 aa16.1■□□□□ 0.17
DDX49-202ENST00000593361 ZNF219Q9P2Y4 722 aaPredicted RBP16.1■□□□□ 0.17
DDX49-202ENST00000593361 PA2G4Q9UQ80 394 aaKnown RBP16.1■□□□□ 0.17
DDX49-202ENST00000593361 PCDHB15Q9Y5E8 787 aa16.1■□□□□ 0.17
DDX49-202ENST00000593361 LTBP1Q14766 1721 aa16.09■□□□□ 0.17
DDX49-202ENST00000593361 HMMRO75330 724 aa16.09■□□□□ 0.17
DDX49-202ENST00000593361 LDHAL6AQ6ZMR3 332 aa16.09■□□□□ 0.17
DDX49-202ENST00000593361 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
DDX49-202ENST00000593361 SIL1Q9H173 461 aa16.09■□□□□ 0.17
DDX49-202ENST00000593361 COPRSQ9NQ92 184 aa16.09■□□□□ 0.17
DDX49-202ENST00000593361 CNNM1Q9NRU3 951 aa16.09■□□□□ 0.17
DDX49-202ENST00000593361 BSDC1Q9NW68 430 aaPredicted RBP16.09■□□□□ 0.17
DDX49-202ENST00000593361 ATP6V0A2Q9Y487 856 aa16.09■□□□□ 0.17
DDX49-202ENST00000593361 FER1L6Q2WGJ9 1857 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms