RNA–Protein interactions for RNA: ENST00000593134.1

RDH13-222, Transcript of retinol dehydrogenase 13, human

TSL 4

Gene RDH13, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH13-222	ENST00000593134	SF3B3	Q15393	1217 aa	Known RBP	11.15	□□□□□ -0.62
RDH13-222	ENST00000593134	FAM161A	Q3B820	660 aa		11.15	□□□□□ -0.62
RDH13-222	ENST00000593134	SKAP1	Q86WV1	359 aa		11.15	□□□□□ -0.62
RDH13-222	ENST00000593134	CNBD1	Q8NA66	436 aa		11.15	□□□□□ -0.62
RDH13-222	ENST00000593134	SEC31B	Q9NQW1	1179 aa		11.15	□□□□□ -0.62
RDH13-222	ENST00000593134	PARP3	Q9Y6F1	533 aa		11.15	□□□□□ -0.62
RDH13-222	ENST00000593134	BCOR	Q6W2J9	1755 aa		11.15	□□□□□ -0.62
RDH13-222	ENST00000593134	TUBGCP6	Q96RT7	1819 aa		11.14	□□□□□ -0.63
RDH13-222	ENST00000593134	SMC5	Q8IY18	1101 aa		11.14	□□□□□ -0.63
RDH13-222	ENST00000593134	PUS3	Q9BZE2	481 aa	Known RBP	11.14	□□□□□ -0.63
RDH13-222	ENST00000593134	EXOC6B	Q9Y2D4	811 aa		11.14	□□□□□ -0.63
RDH13-222	ENST00000593134	CHMP3	Q9Y3E7	222 aa		11.14	□□□□□ -0.63
RDH13-222	ENST00000593134	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.14	□□□□□ -0.63
RDH13-222	ENST00000593134	SURF6	O75683	361 aa	Known RBP	11.13	□□□□□ -0.63
RDH13-222	ENST00000593134	NLRP3	Q96P20	1036 aa		11.13	□□□□□ -0.63
RDH13-222	ENST00000593134	NOP58	Q9Y2X3	529 aa	Known RBP	11.13	□□□□□ -0.63
RDH13-222	ENST00000593134	KLRG2	A4D1S0	409 aa	Predicted RBP	11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	APBB1	O00213	710 aa		11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	NPHP1	O15259	732 aa		11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	HMMR	O75330	724 aa		11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	ITGA6	P23229	1130 aa		11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	LRRC24	Q50LG9	513 aa		11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	ATG9A	Q7Z3C6	839 aa		11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	SLC51A	Q86UW1	340 aa		11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	SGIP1	Q9BQI5	828 aa		11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	BRIP1	Q9BX63	1249 aa		11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	MTFR1L	Q9H019	292 aa		11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	SIL1	Q9H173	461 aa		11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	COPRS	Q9NQ92	184 aa		11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.12	□□□□□ -0.63
RDH13-222	ENST00000593134	SMARCA5	O60264	1052 aa	Predicted RBP	11.11	□□□□□ -0.63
RDH13-222	ENST00000593134	SASH1	O94885	1247 aa		11.11	□□□□□ -0.63
RDH13-222	ENST00000593134	HSP90B1	P14625	803 aa	Known RBP	11.11	□□□□□ -0.63
RDH13-222	ENST00000593134	PTGER2	P43116	358 aa		11.11	□□□□□ -0.63
RDH13-222	ENST00000593134	ST5	P78524	1137 aa		11.11	□□□□□ -0.63
RDH13-222	ENST00000593134	IFIT5	Q13325	482 aa	Known RBP	11.11	□□□□□ -0.63
RDH13-222	ENST00000593134	CCDC57	Q2TAC2	916 aa		11.11	□□□□□ -0.63
RDH13-222	ENST00000593134	CCDC152	Q4G0S7	254 aa		11.11	□□□□□ -0.63
RDH13-222	ENST00000593134	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.11	□□□□□ -0.63
RDH13-222	ENST00000593134	CELF1	Q92879	486 aa	Known RBP	11.11	□□□□□ -0.63
RDH13-222	ENST00000593134	PDZRN3	Q9UPQ7	1066 aa		11.11	□□□□□ -0.63
RDH13-222	ENST00000593134	ANKRD18B	A2A2Z9	1011 aa		11.1	□□□□□ -0.63
RDH13-222	ENST00000593134	SOCS7	O14512	581 aa		11.1	□□□□□ -0.63
RDH13-222	ENST00000593134	NUCB1	Q02818	461 aa		11.1	□□□□□ -0.63
RDH13-222	ENST00000593134	CRY2	Q49AN0	593 aa		11.1	□□□□□ -0.63
RDH13-222	ENST00000593134	ANKRD45	Q5TZF3	282 aa		11.1	□□□□□ -0.63
RDH13-222	ENST00000593134	GCC1	Q96CN9	775 aa		11.1	□□□□□ -0.63
RDH13-222	ENST00000593134	ANKRD36C	Q5JPF3	1778 aa		11.1	□□□□□ -0.63
RDH13-222	ENST00000593134	COL4A1	P02462	1669 aa		11.09	□□□□□ -0.63
RDH13-222	ENST00000593134	RTL9	Q8NET4	1388 aa		11.09	□□□□□ -0.63
RDH13-222	ENST00000593134	EYA2	O00167	538 aa		11.09	□□□□□ -0.63
RDH13-222	ENST00000593134	PDE4A	P27815	886 aa		11.09	□□□□□ -0.63
RDH13-222	ENST00000593134	CHRNA5	P30532	468 aa		11.09	□□□□□ -0.63
RDH13-222	ENST00000593134	HOXA10	P31260	410 aa	Predicted RBP	11.09	□□□□□ -0.63
RDH13-222	ENST00000593134	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
RDH13-222	ENST00000593134	RIPOR2	Q9Y4F9	1068 aa		11.09	□□□□□ -0.63
RDH13-222	ENST00000593134	AFDN	P55196	1824 aa	Known RBP	11.09	□□□□□ -0.63
RDH13-222	ENST00000593134	COL24A1	Q17RW2	1714 aa		11.09	□□□□□ -0.63
RDH13-222	ENST00000593134	WTIP	A6NIX2	430 aa	Predicted RBP	11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	SRGN	P10124	158 aa		11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	RPS8	P62241	208 aa	Known RBP	11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	TFCP2	Q12800	502 aa		11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	LDHAL6A	Q6ZMR3	332 aa		11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	C2CD5	Q86YS7	1000 aa		11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	HELB	Q8NG08	1087 aa	Predicted RBP	11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	RHPN1	Q8TCX5	695 aa		11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	LNPK	Q9C0E8	428 aa		11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	BCL11A	Q9H165	835 aa		11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	IL1RAPL2	Q9NP60	686 aa		11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	FOXD4L1	Q9NU39	408 aa		11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	RIC1	Q4ADV7	1423 aa		11.08	□□□□□ -0.64
RDH13-222	ENST00000593134	QSER1	Q2KHR3	1735 aa		11.07	□□□□□ -0.64
RDH13-222	ENST00000593134		A0A0G2JLW4	131 aa		11.07	□□□□□ -0.64
RDH13-222	ENST00000593134	RAB11FIP3	O75154	756 aa		11.07	□□□□□ -0.64
RDH13-222	ENST00000593134	KCNA3	P22001	575 aa		11.07	□□□□□ -0.64
RDH13-222	ENST00000593134	POLD1	P28340	1107 aa		11.07	□□□□□ -0.64
RDH13-222	ENST00000593134	PDE6B	P35913	854 aa		11.07	□□□□□ -0.64
RDH13-222	ENST00000593134	OS9	Q13438	667 aa	Predicted RBP	11.07	□□□□□ -0.64
RDH13-222	ENST00000593134	TAF7L	Q5H9L4	462 aa		11.07	□□□□□ -0.64
RDH13-222	ENST00000593134	DDX46	Q7L014	1031 aa	Known RBP	11.07	□□□□□ -0.64
RDH13-222	ENST00000593134	CHD1L	Q86WJ1	897 aa		11.07	□□□□□ -0.64
RDH13-222	ENST00000593134	CASZ1	Q86V15	1759 aa		11.06	□□□□□ -0.64
RDH13-222	ENST00000593134		H0YIN7	160 aa		11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	SNAP23	O00161	211 aa		11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	CIAO1	O76071	339 aa		11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	DPEP1	P16444	411 aa		11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	HOXD11	P31277	338 aa	Predicted RBP	11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	IL15	P40933	162 aa	Predicted RBP	11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	GRAP	Q13588	217 aa		11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	ANKRD18A	Q8IVF6	992 aa		11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	GRAPL	Q8TC17	118 aa	Predicted RBP	11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	RPGR	Q92834	1020 aa	Known RBP	11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	EAF2	Q96CJ1	260 aa	Predicted RBP	11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	RBM17	Q96I25	401 aa	Known RBP	11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	CRAMP1	Q96RY5	1269 aa		11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	LRRCC1	Q9C099	1032 aa		11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	CNNM1	Q9NRU3	951 aa		11.06	□□□□□ -0.64
RDH13-222	ENST00000593134	MINPP1	Q9UNW1	487 aa		11.06	□□□□□ -0.64

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