RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 MKRN1Q9UHC7 482 aaKnown RBP13.19□□□□□ -0.3
TUBD1-215ENST00000593110 SCN11AQ9UI33 1791 aa13.19□□□□□ -0.3
TUBD1-215ENST00000593110 IRF6O14896 467 aa13.18□□□□□ -0.3
TUBD1-215ENST00000593110 PPM1GO15355 546 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-215ENST00000593110 PTCD1O75127 700 aaKnown RBP13.18□□□□□ -0.3
TUBD1-215ENST00000593110 USPL1Q5W0Q7 1092 aa13.18□□□□□ -0.3
TUBD1-215ENST00000593110 THSD4Q6ZMP0 1018 aa13.18□□□□□ -0.3
TUBD1-215ENST00000593110 SAMD7Q7Z3H4 446 aa13.18□□□□□ -0.3
TUBD1-215ENST00000593110 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-215ENST00000593110 ADAMTSL1Q8N6G6 1762 aa13.17□□□□□ -0.3
TUBD1-215ENST00000593110 MRC1P22897 1456 aa13.17□□□□□ -0.3
TUBD1-215ENST00000593110 PASKQ96RG2 1323 aa13.17□□□□□ -0.3
TUBD1-215ENST00000593110 RCCD1A6NED2 376 aa13.17□□□□□ -0.3
TUBD1-215ENST00000593110 HSP90AB1P08238 724 aaKnown RBP13.17□□□□□ -0.3
TUBD1-215ENST00000593110 NFIXQ14938 502 aa13.17□□□□□ -0.3
TUBD1-215ENST00000593110 CCER1Q8TC90 406 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-215ENST00000593110 SOWAHBA6NEL2 793 aa13.16□□□□□ -0.3
TUBD1-215ENST00000593110 BCAMP50895 628 aa13.16□□□□□ -0.3
TUBD1-215ENST00000593110 TTLL6Q8N841 843 aa13.16□□□□□ -0.3
TUBD1-215ENST00000593110 CCDC102AQ96A19 550 aa13.16□□□□□ -0.3
TUBD1-215ENST00000593110 THSD7BQ9C0I4 1608 aa13.16□□□□□ -0.3
TUBD1-215ENST00000593110 RNF40O75150 1001 aa13.15□□□□□ -0.3
TUBD1-215ENST00000593110 SLC4A3P48751 1232 aa13.15□□□□□ -0.3
TUBD1-215ENST00000593110 CABP4P57796 275 aa13.15□□□□□ -0.3
TUBD1-215ENST00000593110 ZNF530Q6P9A1 599 aaPredicted RBP13.15□□□□□ -0.3
TUBD1-215ENST00000593110 COL15A1P39059 1388 aa13.15□□□□□ -0.3
TUBD1-215ENST00000593110 SCN7AQ01118 1682 aa13.15□□□□□ -0.31
TUBD1-215ENST00000593110 ARFGEF2Q9Y6D5 1785 aa13.15□□□□□ -0.31
TUBD1-215ENST00000593110 CTCFP49711 727 aaPredicted RBP13.14□□□□□ -0.31
TUBD1-215ENST00000593110 SWT1Q5T5J6 900 aaKnown RBP13.14□□□□□ -0.31
TUBD1-215ENST00000593110 WBP1LQ9NX94 342 aa13.14□□□□□ -0.31
TUBD1-215ENST00000593110 LTBP3Q9NS15 1303 aa13.13□□□□□ -0.31
TUBD1-215ENST00000593110 VEGFBP49765 207 aa13.13□□□□□ -0.31
TUBD1-215ENST00000593110 PTPN5P54829 565 aa13.13□□□□□ -0.31
TUBD1-215ENST00000593110 DNAJC10Q8IXB1 793 aa13.13□□□□□ -0.31
TUBD1-215ENST00000593110 NFATC2IPQ8NCF5 419 aa13.13□□□□□ -0.31
TUBD1-215ENST00000593110 TMEM134Q9H6X4 195 aa13.13□□□□□ -0.31
TUBD1-215ENST00000593110 NARFQ9UHQ1 456 aa13.13□□□□□ -0.31
TUBD1-215ENST00000593110 SCN4AP35499 1836 aa13.13□□□□□ -0.31
TUBD1-215ENST00000593110 UBR2Q8IWV8 1755 aa13.12□□□□□ -0.31
TUBD1-215ENST00000593110 ZPR1O75312 459 aa13.12□□□□□ -0.31
TUBD1-215ENST00000593110 SERPINB2P05120 415 aa13.12□□□□□ -0.31
TUBD1-215ENST00000593110 HSPA8P11142 646 aaKnown RBP13.12□□□□□ -0.31
TUBD1-215ENST00000593110 PLEKHO1Q53GL0 409 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-215ENST00000593110 C2CD5Q86YS7 1000 aa13.12□□□□□ -0.31
TUBD1-215ENST00000593110 ABHD8Q96I13 439 aa13.12□□□□□ -0.31
TUBD1-215ENST00000593110 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
TUBD1-215ENST00000593110 ZBTB1Q9Y2K1 713 aa13.12□□□□□ -0.31
TUBD1-215ENST00000593110 CYP19A1P11511 503 aaPredicted RBP13.11□□□□□ -0.31
TUBD1-215ENST00000593110 LBX1P52954 281 aa13.11□□□□□ -0.31
TUBD1-215ENST00000593110 AEBP1Q8IUX7 1158 aa13.11□□□□□ -0.31
TUBD1-215ENST00000593110 SLF2Q8IX21 1173 aa13.11□□□□□ -0.31
TUBD1-215ENST00000593110 HPS5Q9UPZ3 1129 aa13.11□□□□□ -0.31
TUBD1-215ENST00000593110 SLX4Q8IY92 1834 aa13.11□□□□□ -0.31
TUBD1-215ENST00000593110 DDNO94850 711 aaPredicted RBP13.1□□□□□ -0.31
TUBD1-215ENST00000593110 ITGBL1O95965 494 aaPredicted RBP13.1□□□□□ -0.31
TUBD1-215ENST00000593110 MTHFSP49914 203 aa13.1□□□□□ -0.31
TUBD1-215ENST00000593110 ERFEQ4G0M1 354 aa13.1□□□□□ -0.31
TUBD1-215ENST00000593110 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
TUBD1-215ENST00000593110 TNRC18O15417 2968 aaPredicted RBP13.09□□□□□ -0.31
TUBD1-215ENST00000593110 CACNA1SQ13698 1873 aa13.09□□□□□ -0.31
TUBD1-215ENST00000593110 CDCA8Q53HL2 280 aa13.09□□□□□ -0.31
TUBD1-215ENST00000593110 LDHDQ86WU2 507 aa13.09□□□□□ -0.31
TUBD1-215ENST00000593110 TSR3Q9UJK0 312 aaKnown RBP13.09□□□□□ -0.31
TUBD1-215ENST00000593110 H0YIN7 160 aa13.08□□□□□ -0.32
TUBD1-215ENST00000593110 C21orf2O43822 256 aa13.08□□□□□ -0.32
TUBD1-215ENST00000593110 RGS19P49795 217 aa13.08□□□□□ -0.32
TUBD1-215ENST00000593110 AIDAQ96BJ3 306 aa13.08□□□□□ -0.32
TUBD1-215ENST00000593110 PHOX2BQ99453 314 aa13.08□□□□□ -0.32
TUBD1-215ENST00000593110 TAF1DQ9H5J8 278 aaPredicted RBP13.08□□□□□ -0.32
TUBD1-215ENST00000593110 RASSF10A6NK89 507 aa13.07□□□□□ -0.32
TUBD1-215ENST00000593110 TMEM88BA6NKF7 163 aa13.07□□□□□ -0.32
TUBD1-215ENST00000593110 PPP4CP60510 307 aa13.07□□□□□ -0.32
TUBD1-215ENST00000593110 C1orf141Q5JVX7 400 aa13.07□□□□□ -0.32
TUBD1-215ENST00000593110 NLRP7Q8WX94 980 aa13.07□□□□□ -0.32
TUBD1-215ENST00000593110 NECTIN2Q92692 538 aa13.07□□□□□ -0.32
TUBD1-215ENST00000593110 TAOK3Q9H2K8 898 aa13.07□□□□□ -0.32
TUBD1-215ENST00000593110 SLC52A2Q9HAB3 445 aa13.07□□□□□ -0.32
TUBD1-215ENST00000593110 LTBP1Q14766 1721 aa13.07□□□□□ -0.32
TUBD1-215ENST00000593110 PRR5LQ6MZQ0 368 aa13.06□□□□□ -0.32
TUBD1-215ENST00000593110 BCORQ6W2J9 1755 aa13.06□□□□□ -0.32
TUBD1-215ENST00000593110 IQCA1LA6NCM1 817 aa13.05□□□□□ -0.32
TUBD1-215ENST00000593110 TNNT2P45379 298 aaPredicted RBP13.05□□□□□ -0.32
TUBD1-215ENST00000593110 SLC39A6Q13433 755 aa13.05□□□□□ -0.32
TUBD1-215ENST00000593110 BRIP1Q9BX63 1249 aa13.05□□□□□ -0.32
TUBD1-215ENST00000593110 SLC24A3Q9HC58 644 aa13.05□□□□□ -0.32
TUBD1-215ENST00000593110 DAXXQ9UER7 740 aaPredicted RBP13.05□□□□□ -0.32
TUBD1-215ENST00000593110 EIF5P55010 431 aaKnown RBP13.04□□□□□ -0.32
TUBD1-215ENST00000593110 TBC1D9BQ66K14 1250 aa13.04□□□□□ -0.32
TUBD1-215ENST00000593110 ZNF622Q969S3 477 aaKnown RBP eCLIP13.04□□□□□ -0.32
TUBD1-215ENST00000593110 PDZRN3Q9UPQ7 1066 aa13.04□□□□□ -0.32
TUBD1-215ENST00000593110 ZNF541Q9H0D2 1346 aa13.04□□□□□ -0.32
TUBD1-215ENST00000593110 MDM2Q00987 491 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-215ENST00000593110 MLLT1Q03111 559 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-215ENST00000593110 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
TUBD1-215ENST00000593110 AKAP4Q5JQC9 854 aa13.03□□□□□ -0.32
TUBD1-215ENST00000593110 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
TUBD1-215ENST00000593110 C7orf43Q8WVR3 580 aa13.03□□□□□ -0.32
TUBD1-215ENST00000593110 LGR6Q9HBX8 967 aa13.03□□□□□ -0.32
TUBD1-215ENST00000593110 SNED1Q8TER0 1413 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms