RNA–Protein interactions for RNA: ENST00000592864.2

CACNA1A-211, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3 BASIC

Gene CACNA1A, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-211ENST00000592864 EXOC6Q8TAG9 804 aa17.4■□□□□ 0.38
CACNA1A-211ENST00000592864 KAZALD1Q96I82 304 aa17.4■□□□□ 0.38
CACNA1A-211ENST00000592864 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-211ENST00000592864 RABL6Q3YEC7 729 aaPredicted RBP17.39■□□□□ 0.38
CACNA1A-211ENST00000592864 LMBR1LQ6UX01 489 aa17.39■□□□□ 0.38
CACNA1A-211ENST00000592864 RPAP2Q8IXW5 612 aaPredicted RBP17.39■□□□□ 0.38
CACNA1A-211ENST00000592864 RPGRQ92834 1020 aaKnown RBP17.39■□□□□ 0.38
CACNA1A-211ENST00000592864 RBM17Q96I25 401 aaKnown RBP17.39■□□□□ 0.38
CACNA1A-211ENST00000592864 CRY2Q49AN0 593 aa17.39■□□□□ 0.37
CACNA1A-211ENST00000592864 NPR1P16066 1061 aa17.38■□□□□ 0.37
CACNA1A-211ENST00000592864 ATP8B2P98198 1209 aa17.38■□□□□ 0.37
CACNA1A-211ENST00000592864 EPHA10Q5JZY3 1008 aa17.38■□□□□ 0.37
CACNA1A-211ENST00000592864 DDX46Q7L014 1031 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-211ENST00000592864 C2CD5Q86YS7 1000 aa17.38■□□□□ 0.37
CACNA1A-211ENST00000592864 MASTLQ96GX5 879 aa17.38■□□□□ 0.37
CACNA1A-211ENST00000592864 CHMP3Q9Y3E7 222 aa17.38■□□□□ 0.37
CACNA1A-211ENST00000592864 RTL9Q8NET4 1388 aa17.37■□□□□ 0.37
CACNA1A-211ENST00000592864 SRGNP10124 158 aa17.37■□□□□ 0.37
CACNA1A-211ENST00000592864 ALDH1B1P30837 517 aa17.37■□□□□ 0.37
CACNA1A-211ENST00000592864 IFIT5Q13325 482 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-211ENST00000592864 MTX1Q13505 466 aa17.37■□□□□ 0.37
CACNA1A-211ENST00000592864 CCDC57Q2TAC2 916 aa17.37■□□□□ 0.37
CACNA1A-211ENST00000592864 ERICH6BQ5W0A0 696 aa17.37■□□□□ 0.37
CACNA1A-211ENST00000592864 ANKRD44Q8N8A2 993 aa17.37■□□□□ 0.37
CACNA1A-211ENST00000592864 FHDC1Q9C0D6 1143 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-211ENST00000592864 TNRC6CQ9HCJ0 1690 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-211ENST00000592864 ANKRD18BA2A2Z9 1011 aa17.36■□□□□ 0.37
CACNA1A-211ENST00000592864 HOXA10P31260 410 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-211ENST00000592864 STYK1Q6J9G0 422 aa17.36■□□□□ 0.37
CACNA1A-211ENST00000592864 KLHL34Q8N239 644 aa17.36■□□□□ 0.37
CACNA1A-211ENST00000592864 CRAMP1Q96RY5 1269 aa17.36■□□□□ 0.37
CACNA1A-211ENST00000592864 C1orf115Q9H7X2 142 aa17.36■□□□□ 0.37
CACNA1A-211ENST00000592864 HMMRO75330 724 aa17.36■□□□□ 0.37
CACNA1A-211ENST00000592864 C3orf67Q6ZVT6 689 aa17.36■□□□□ 0.37
CACNA1A-211ENST00000592864 CDC5LQ99459 802 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-211ENST00000592864 SRGAP3O43295 1099 aa17.35■□□□□ 0.37
CACNA1A-211ENST00000592864 ITGA6P23229 1130 aa17.35■□□□□ 0.37
CACNA1A-211ENST00000592864 CEP85Q6P2H3 762 aa17.35■□□□□ 0.37
CACNA1A-211ENST00000592864 CNKSR1Q969H4 720 aa17.35■□□□□ 0.37
CACNA1A-211ENST00000592864 GREM2Q9H772 168 aa17.35■□□□□ 0.37
CACNA1A-211ENST00000592864 DLEC1Q9Y238 1755 aa17.34■□□□□ 0.37
CACNA1A-211ENST00000592864 TAF7LQ5H9L4 462 aa17.34■□□□□ 0.37
CACNA1A-211ENST00000592864 ZNF622Q969S3 477 aaKnown RBP eCLIP17.34■□□□□ 0.37
CACNA1A-211ENST00000592864 CCDC85AQ96PX6 553 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-211ENST00000592864 SYT17Q9BSW7 474 aa17.34■□□□□ 0.37
CACNA1A-211ENST00000592864 BBOX1O75936 387 aa17.33■□□□□ 0.37
CACNA1A-211ENST00000592864 FAM161AQ3B820 660 aa17.33■□□□□ 0.37
CACNA1A-211ENST00000592864 ANKRD18AQ8IVF6 992 aa17.33■□□□□ 0.37
CACNA1A-211ENST00000592864 A0A0G2JLW4 131 aa17.32■□□□□ 0.36
CACNA1A-211ENST00000592864 DPEP1P16444 411 aa17.32■□□□□ 0.36
CACNA1A-211ENST00000592864 CHRNA5P30532 468 aa17.32■□□□□ 0.36
CACNA1A-211ENST00000592864 IGHMBP2P38935 993 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-211ENST00000592864 RPS8P62241 208 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-211ENST00000592864 GRAPQ13588 217 aa17.32■□□□□ 0.36
CACNA1A-211ENST00000592864 TMC4Q7Z404 712 aa17.32■□□□□ 0.36
CACNA1A-211ENST00000592864 GRAPLQ8TC17 118 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-211ENST00000592864 SSH3Q8TE77 659 aa17.32■□□□□ 0.36
CACNA1A-211ENST00000592864 PIM2Q9P1W9 311 aa17.32■□□□□ 0.36
CACNA1A-211ENST00000592864 COL11A2P13942 1736 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-211ENST00000592864 POLA2Q14181 598 aa17.32■□□□□ 0.36
CACNA1A-211ENST00000592864 PNMA6EA0A0J9YXQ4 647 aa17.31■□□□□ 0.36
CACNA1A-211ENST00000592864 TTLL6Q8N841 843 aa17.31■□□□□ 0.36
CACNA1A-211ENST00000592864 MPHOSPH8Q99549 860 aa17.31■□□□□ 0.36
CACNA1A-211ENST00000592864 TMX4Q9H1E5 349 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-211ENST00000592864 SEC31BQ9NQW1 1179 aa17.31■□□□□ 0.36
CACNA1A-211ENST00000592864 FBXO3Q9UK99 471 aa17.31■□□□□ 0.36
CACNA1A-211ENST00000592864 PCDHB15Q9Y5E8 787 aa17.31■□□□□ 0.36
CACNA1A-211ENST00000592864 KIAA1551Q9HCM1 1747 aa17.31■□□□□ 0.36
CACNA1A-211ENST00000592864 TAF1P21675 1872 aa17.3■□□□□ 0.36
CACNA1A-211ENST00000592864 KCNA3P22001 575 aa17.3■□□□□ 0.36
CACNA1A-211ENST00000592864 RWDD1Q9H446 243 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-211ENST00000592864 RFX5P48382 616 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-211ENST00000592864 COPRSQ9NQ92 184 aa17.29■□□□□ 0.36
CACNA1A-211ENST00000592864 BSDC1Q9NW68 430 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-211ENST00000592864 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
CACNA1A-211ENST00000592864 PTPN12Q05209 780 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-211ENST00000592864 HSP90AB4PQ58FF6 505 aa17.29■□□□□ 0.36
CACNA1A-211ENST00000592864 LDHAL6AQ6ZMR3 332 aa17.29■□□□□ 0.36
CACNA1A-211ENST00000592864 SIRT2Q8IXJ6 389 aa17.29■□□□□ 0.36
CACNA1A-211ENST00000592864 CELF1Q92879 486 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-211ENST00000592864 G3BP1Q13283 466 aaKnown RBP eCLIP17.28■□□□□ 0.36
CACNA1A-211ENST00000592864 HDAC1Q13547 482 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-211ENST00000592864 DALRD3Q5D0E6 543 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-211ENST00000592864 BRCA1P38398 1863 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-211ENST00000592864 SPEF2Q9C093 1822 aa17.27■□□□□ 0.36
CACNA1A-211ENST00000592864 PPEF1O14829 653 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-211ENST00000592864 CIAO1O76071 339 aa17.27■□□□□ 0.36
CACNA1A-211ENST00000592864 GRIPAP1Q4V328 841 aa17.27■□□□□ 0.36
CACNA1A-211ENST00000592864 SP8Q8IXZ3 490 aa17.27■□□□□ 0.36
CACNA1A-211ENST00000592864 NLGN2Q8NFZ4 835 aa17.27■□□□□ 0.36
CACNA1A-211ENST00000592864 ZNF594Q96JF6 807 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-211ENST00000592864 CNNM1Q9NRU3 951 aa17.27■□□□□ 0.36
CACNA1A-211ENST00000592864 SURF6O75683 361 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-211ENST00000592864 CC2D2BQ6DHV5 1058 aa17.26■□□□□ 0.35
CACNA1A-211ENST00000592864 PRPF40BQ6NWY9 871 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-211ENST00000592864 NOP58Q9Y2X3 529 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-211ENST00000592864 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
CACNA1A-211ENST00000592864 SLX4Q8IY92 1834 aa17.26■□□□□ 0.35
CACNA1A-211ENST00000592864 EYA2O00167 538 aa17.25■□□□□ 0.35
CACNA1A-211ENST00000592864 SOGA3Q5TF21 947 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms