RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 RAD51AP2Q09MP3 1159 aa9.96□□□□□ -0.82
VMP1-215ENST00000592619 EFHC2Q5JST6 749 aa9.96□□□□□ -0.82
VMP1-215ENST00000592619 NLRP13Q86W25 1043 aa9.96□□□□□ -0.82
VMP1-215ENST00000592619 PMEPA1Q969W9 287 aa9.96□□□□□ -0.82
VMP1-215ENST00000592619 NLRP2Q9NX02 1062 aa9.96□□□□□ -0.82
VMP1-215ENST00000592619 AXIN1O15169 862 aa9.95□□□□□ -0.82
VMP1-215ENST00000592619 ZNF76P36508 570 aa9.95□□□□□ -0.82
VMP1-215ENST00000592619 C9orf131Q5VYM1 1079 aa9.95□□□□□ -0.82
VMP1-215ENST00000592619 NT5DC4Q86YG4 428 aa9.95□□□□□ -0.82
VMP1-215ENST00000592619 CHRDQ9H2X0 955 aa9.95□□□□□ -0.82
VMP1-215ENST00000592619 C12orf49Q9H741 205 aa9.95□□□□□ -0.82
VMP1-215ENST00000592619 ABI2Q9NYB9 513 aaPredicted RBP9.95□□□□□ -0.82
VMP1-215ENST00000592619 SENP3-EIF4A1A0A087X0R7 540 aa9.94□□□□□ -0.82
VMP1-215ENST00000592619 NAALADL2Q58DX5 795 aa9.94□□□□□ -0.82
VMP1-215ENST00000592619 FIGNL1Q6PIW4 674 aa9.94□□□□□ -0.82
VMP1-215ENST00000592619 GALNT12Q8IXK2 581 aa9.94□□□□□ -0.82
VMP1-215ENST00000592619 EPS8L3Q8TE67 593 aaKnown RBP9.94□□□□□ -0.82
VMP1-215ENST00000592619 GAS2L1Q99501 681 aaPredicted RBP9.94□□□□□ -0.82
VMP1-215ENST00000592619 ZCCHC2Q9C0B9 1178 aaKnown RBP9.94□□□□□ -0.82
VMP1-215ENST00000592619 SRCIN1Q9C0H9 1055 aa9.94□□□□□ -0.82
VMP1-215ENST00000592619 FAM157BP0CG42 384 aa9.93□□□□□ -0.82
VMP1-215ENST00000592619 OSBPL7Q9BZF2 842 aa9.93□□□□□ -0.82
VMP1-215ENST00000592619 CNTN3Q9P232 1028 aa9.93□□□□□ -0.82
VMP1-215ENST00000592619 KCNH4Q9UQ05 1017 aa9.93□□□□□ -0.82
VMP1-215ENST00000592619 LOC105371045A0A1W2PR82 267 aa9.92□□□□□ -0.82
VMP1-215ENST00000592619 EFSO43281 561 aa9.92□□□□□ -0.82
VMP1-215ENST00000592619 IRS1P35568 1242 aa9.92□□□□□ -0.82
VMP1-215ENST00000592619 PI16Q6UXB8 463 aa9.92□□□□□ -0.82
VMP1-215ENST00000592619 C1orf127Q8N9H9 656 aa9.92□□□□□ -0.82
VMP1-215ENST00000592619 SREK1Q8WXA9 508 aaKnown RBP9.92□□□□□ -0.82
VMP1-215ENST00000592619 TGIF2Q9GZN2 237 aa9.92□□□□□ -0.82
VMP1-215ENST00000592619 FAM8A1Q9UBU6 413 aa9.92□□□□□ -0.82
VMP1-215ENST00000592619 USP31Q70CQ4 1352 aa9.91□□□□□ -0.82
VMP1-215ENST00000592619 MAN1A2O60476 641 aa9.91□□□□□ -0.82
VMP1-215ENST00000592619 VEGFBP49765 207 aa9.91□□□□□ -0.82
VMP1-215ENST00000592619 LAMC2Q13753 1193 aa9.91□□□□□ -0.82
VMP1-215ENST00000592619 TTC39BQ5VTQ0 682 aaPredicted RBP9.91□□□□□ -0.82
VMP1-215ENST00000592619 DRC1Q96MC2 740 aa9.91□□□□□ -0.82
VMP1-215ENST00000592619 PCDHGC4Q9Y5F7 938 aa9.91□□□□□ -0.82
VMP1-215ENST00000592619 EREGO14944 169 aa9.9□□□□□ -0.82
VMP1-215ENST00000592619 ATXN7O15265 892 aaPredicted RBP9.9□□□□□ -0.82
VMP1-215ENST00000592619 EFCC1Q9HA90 598 aa9.9□□□□□ -0.82
VMP1-215ENST00000592619 NPHS2Q9NP85 383 aa9.9□□□□□ -0.82
VMP1-215ENST00000592619 SHROOM4Q9ULL8 1493 aa9.9□□□□□ -0.83
VMP1-215ENST00000592619 THBS1P07996 1170 aa9.89□□□□□ -0.83
VMP1-215ENST00000592619 CES1P23141 567 aa9.89□□□□□ -0.83
VMP1-215ENST00000592619 CCINQ13939 588 aa9.89□□□□□ -0.83
VMP1-215ENST00000592619 UBAP2LQ14157 1087 aaKnown RBP9.89□□□□□ -0.83
VMP1-215ENST00000592619 GSX2Q9BZM3 304 aa9.89□□□□□ -0.83
VMP1-215ENST00000592619 ATP13A2Q9NQ11 1180 aa9.89□□□□□ -0.83
VMP1-215ENST00000592619 SLC35F4A4IF30 521 aa9.88□□□□□ -0.83
VMP1-215ENST00000592619 H7C1W4 665 aa9.88□□□□□ -0.83
VMP1-215ENST00000592619 POLR3DP05423 398 aaPredicted RBP9.88□□□□□ -0.83
VMP1-215ENST00000592619 ST13P50502 369 aaKnown RBP9.88□□□□□ -0.83
VMP1-215ENST00000592619 PTPN12Q05209 780 aaKnown RBP9.88□□□□□ -0.83
VMP1-215ENST00000592619 SFSWAPQ12872 951 aaKnown RBP9.88□□□□□ -0.83
VMP1-215ENST00000592619 SF3A1Q15459 793 aaKnown RBP9.88□□□□□ -0.83
VMP1-215ENST00000592619 KIAA0319Q5VV43 1072 aa9.88□□□□□ -0.83
VMP1-215ENST00000592619 OR13H1Q8NG92 308 aa9.88□□□□□ -0.83
VMP1-215ENST00000592619 BCO2Q9BYV7 579 aa9.88□□□□□ -0.83
VMP1-215ENST00000592619 SUV39H2Q9H5I1 410 aa9.88□□□□□ -0.83
VMP1-215ENST00000592619 ST8SIA5O15466 376 aa9.87□□□□□ -0.83
VMP1-215ENST00000592619 SASH3O75995 380 aa9.87□□□□□ -0.83
VMP1-215ENST00000592619 PTSQ03393 145 aa9.87□□□□□ -0.83
VMP1-215ENST00000592619 TNP2Q05952 138 aa9.87□□□□□ -0.83
VMP1-215ENST00000592619 TAF1CQ15572 869 aaPredicted RBP9.87□□□□□ -0.83
VMP1-215ENST00000592619 NUCKS1Q9H1E3 243 aaKnown RBP9.87□□□□□ -0.83
VMP1-215ENST00000592619 USP17L7P0C7H9 530 aa9.86□□□□□ -0.83
VMP1-215ENST00000592619 EDN3P14138 238 aa9.86□□□□□ -0.83
VMP1-215ENST00000592619 NXPE4Q6UWF7 544 aa9.86□□□□□ -0.83
VMP1-215ENST00000592619 RIPOR1Q6ZS17 1223 aa9.86□□□□□ -0.83
VMP1-215ENST00000592619 GMCL1Q96IK5 515 aa9.86□□□□□ -0.83
VMP1-215ENST00000592619 AAASQ9NRG9 546 aa9.86□□□□□ -0.83
VMP1-215ENST00000592619 NDFIP2Q9NV92 336 aa9.86□□□□□ -0.83
VMP1-215ENST00000592619 STK17AQ9UEE5 414 aa9.86□□□□□ -0.83
VMP1-215ENST00000592619 GADD45BO75293 160 aaPredicted RBP9.85□□□□□ -0.83
VMP1-215ENST00000592619 TARSP26639 723 aaKnown RBP9.85□□□□□ -0.83
VMP1-215ENST00000592619 GRM2Q14416 872 aa9.85□□□□□ -0.83
VMP1-215ENST00000592619 SLC43A3Q8NBI5 491 aa9.85□□□□□ -0.83
VMP1-215ENST00000592619 CCSER2Q9H7U1 834 aa9.85□□□□□ -0.83
VMP1-215ENST00000592619 PPP4R2Q9NY27 417 aa9.85□□□□□ -0.83
VMP1-215ENST00000592619 SALL4Q9UJQ4 1053 aa9.85□□□□□ -0.83
VMP1-215ENST00000592619 TRAK1Q9UPV9 953 aa9.85□□□□□ -0.83
VMP1-215ENST00000592619 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.85□□□□□ -0.83
VMP1-215ENST00000592619 KHNYNO15037 678 aaKnown RBP9.84□□□□□ -0.83
VMP1-215ENST00000592619 MMP20O60882 483 aa9.84□□□□□ -0.83
VMP1-215ENST00000592619 MAPTP10636 758 aaKnown RBP9.84□□□□□ -0.83
VMP1-215ENST00000592619 HS2ST1Q7LGA3 356 aa9.84□□□□□ -0.83
VMP1-215ENST00000592619 TRIM22Q8IYM9 498 aa9.84□□□□□ -0.83
VMP1-215ENST00000592619 TINF2Q9BSI4 451 aa9.84□□□□□ -0.83
VMP1-215ENST00000592619 MARK1Q9P0L2 795 aa9.84□□□□□ -0.83
VMP1-215ENST00000592619 DDX41Q9UJV9 622 aaKnown RBP9.84□□□□□ -0.83
VMP1-215ENST00000592619 A0A1W2PP55 124 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 DCDC2BA2VCK2 349 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 PHF20L1A8MW92 1017 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 WFS1O76024 890 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 MAP3K6O95382 1288 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 CYP2E1P05181 493 aaPredicted RBP9.83□□□□□ -0.84
VMP1-215ENST00000592619 RARAP10276 462 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 HOXD8P13378 290 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms