RNA–Protein interactions for RNA: ENST00000592561.5

PSMD8-208, Transcript of proteasome 26S subunit, non-ATPase 8, human

TSL 2

Gene PSMD8, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD8-208	ENST00000592561	RTL5	Q5HYW3	569 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMD8-208	ENST00000592561	UBE3B	Q7Z3V4	1068 aa		13.78	□□□□□ -0.2
PSMD8-208	ENST00000592561	SYNE4	Q8N205	404 aa		13.78	□□□□□ -0.2
PSMD8-208	ENST00000592561	PANK1	Q8TE04	598 aa		13.78	□□□□□ -0.2
PSMD8-208	ENST00000592561	USP44	Q9H0E7	712 aa		13.78	□□□□□ -0.2
PSMD8-208	ENST00000592561	KLRG2	A4D1S0	409 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMD8-208	ENST00000592561	HCLS1	P14317	486 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMD8-208	ENST00000592561	LAMB2	P55268	1798 aa		13.77	□□□□□ -0.21
PSMD8-208	ENST00000592561	TGFB2	P61812	414 aa		13.77	□□□□□ -0.21
PSMD8-208	ENST00000592561	ANKRD31	Q8N7Z5	1873 aa		13.77	□□□□□ -0.21
PSMD8-208	ENST00000592561	JARID2	Q92833	1246 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMD8-208	ENST00000592561	NLRP3	Q96P20	1036 aa		13.77	□□□□□ -0.21
PSMD8-208	ENST00000592561	PDZRN3	Q9UPQ7	1066 aa		13.77	□□□□□ -0.21
PSMD8-208	ENST00000592561	DDX60	Q8IY21	1712 aa	Known RBP	13.76	□□□□□ -0.21
PSMD8-208	ENST00000592561	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.76	□□□□□ -0.21
PSMD8-208	ENST00000592561	PDE8A	O60658	829 aa		13.76	□□□□□ -0.21
PSMD8-208	ENST00000592561	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMD8-208	ENST00000592561	IRX6	P78412	446 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMD8-208	ENST00000592561	CRY2	Q49AN0	593 aa		13.76	□□□□□ -0.21
PSMD8-208	ENST00000592561	C20orf194	Q5TEA3	1177 aa		13.76	□□□□□ -0.21
PSMD8-208	ENST00000592561	ITPRIP	Q8IWB1	547 aa		13.76	□□□□□ -0.21
PSMD8-208	ENST00000592561	NLGN2	Q8NFZ4	835 aa		13.76	□□□□□ -0.21
PSMD8-208	ENST00000592561	PLA2G12B	Q9BX93	195 aa		13.76	□□□□□ -0.21
PSMD8-208	ENST00000592561	UTRN	P46939	3433 aa		13.76	□□□□□ -0.21
PSMD8-208	ENST00000592561	MVP	Q14764	893 aa	Known RBP	13.75	□□□□□ -0.21
PSMD8-208	ENST00000592561	MEIS3	Q99687	375 aa		13.75	□□□□□ -0.21
PSMD8-208	ENST00000592561	KIAA1551	Q9HCM1	1747 aa		13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561		H0YIN7	160 aa		13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561	GNAI3	P08754	354 aa		13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561	UBTFL1	P0CB47	393 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561	SRGN	P10124	158 aa		13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561	C1QTNF8	P60827	252 aa		13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561	SF3B3	Q15393	1217 aa	Known RBP	13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561	C3orf67	Q6ZVT6	689 aa		13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561	C2CD5	Q86YS7	1000 aa		13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561	CCDC136	Q96JN2	1154 aa		13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561	DDX19B	Q9UMR2	479 aa		13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561	HDAC5	Q9UQL6	1122 aa		13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561	COG6	Q9Y2V7	657 aa		13.74	□□□□□ -0.21
PSMD8-208	ENST00000592561	ZBTB7B	O15156	539 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMD8-208	ENST00000592561	DPEP1	P16444	411 aa		13.73	□□□□□ -0.21
PSMD8-208	ENST00000592561	CTSW	P56202	376 aa		13.73	□□□□□ -0.21
PSMD8-208	ENST00000592561	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMD8-208	ENST00000592561	SUCLG2	Q96I99	432 aa		13.73	□□□□□ -0.21
PSMD8-208	ENST00000592561	COL11A2	P13942	1736 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMD8-208	ENST00000592561		A0A0G2JLW4	131 aa		13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	CSF1R	P07333	972 aa		13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	NPR1	P16066	1061 aa		13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	KCNA3	P22001	575 aa		13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	CHRNA5	P30532	468 aa		13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	HOXA10	P31260	410 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	FOXO4	P98177	505 aa		13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	CCDC152	Q4G0S7	254 aa		13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	STYK1	Q6J9G0	422 aa		13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	TTLL11	Q8NHH1	800 aa		13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	RPGR	Q92834	1020 aa	Known RBP	13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	MASTL	Q96GX5	879 aa		13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	KAZALD1	Q96I82	304 aa		13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	CHMP4B	Q9H444	224 aa	Known RBP	13.72	□□□□□ -0.21
PSMD8-208	ENST00000592561	DLEC1	Q9Y238	1755 aa		13.71	□□□□□ -0.21
PSMD8-208	ENST00000592561	RABL6	Q3YEC7	729 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMD8-208	ENST00000592561	EPHA10	Q5JZY3	1008 aa		13.71	□□□□□ -0.21
PSMD8-208	ENST00000592561	BICC1	Q9H694	974 aa	Known RBP	13.71	□□□□□ -0.21
PSMD8-208	ENST00000592561	RTL9	Q8NET4	1388 aa		13.71	□□□□□ -0.22
PSMD8-208	ENST00000592561	MYH3	P11055	1940 aa		13.7	□□□□□ -0.22
PSMD8-208	ENST00000592561	GNAI2	P04899	355 aa		13.7	□□□□□ -0.22
PSMD8-208	ENST00000592561	B4GALNT3	Q6L9W6	998 aa		13.7	□□□□□ -0.22
PSMD8-208	ENST00000592561	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PSMD8-208	ENST00000592561	RBM17	Q96I25	401 aa	Known RBP	13.7	□□□□□ -0.22
PSMD8-208	ENST00000592561	CRAMP1	Q96RY5	1269 aa		13.7	□□□□□ -0.22
PSMD8-208	ENST00000592561	PIM2	Q9P1W9	311 aa		13.7	□□□□□ -0.22
PSMD8-208	ENST00000592561	WWC3	Q9ULE0	1092 aa		13.7	□□□□□ -0.22
PSMD8-208	ENST00000592561	LRRFIP2	Q9Y608	721 aa	Known RBP	13.7	□□□□□ -0.22
PSMD8-208	ENST00000592561	ALDH1B1	P30837	517 aa		13.69	□□□□□ -0.22
PSMD8-208	ENST00000592561	LMBR1L	Q6UX01	489 aa		13.69	□□□□□ -0.22
PSMD8-208	ENST00000592561	DDX46	Q7L014	1031 aa	Known RBP	13.69	□□□□□ -0.22
PSMD8-208	ENST00000592561	PLCD3	Q8N3E9	789 aa		13.69	□□□□□ -0.22
PSMD8-208	ENST00000592561	ANKRD44	Q8N8A2	993 aa		13.69	□□□□□ -0.22
PSMD8-208	ENST00000592561	CNKSR1	Q969H4	720 aa		13.69	□□□□□ -0.22
PSMD8-208	ENST00000592561	GREM2	Q9H772	168 aa		13.69	□□□□□ -0.22
PSMD8-208	ENST00000592561	ZBTB40	Q9NUA8	1239 aa		13.69	□□□□□ -0.22
PSMD8-208	ENST00000592561	YBX3	P16989	372 aa	Known RBP eCLIP	13.68	□□□□□ -0.22	8e-10	■□□□□ 10.3
PSMD8-208	ENST00000592561	FAM161A	Q3B820	660 aa		13.68	□□□□□ -0.22
PSMD8-208	ENST00000592561	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.68	□□□□□ -0.22
PSMD8-208	ENST00000592561	BRCA1	P38398	1863 aa	Known RBP	13.67	□□□□□ -0.22
PSMD8-208	ENST00000592561	GRIN3B	O60391	1043 aa		13.67	□□□□□ -0.22
PSMD8-208	ENST00000592561	ITGA6	P23229	1130 aa		13.67	□□□□□ -0.22
PSMD8-208	ENST00000592561	MTX1	Q13505	466 aa		13.67	□□□□□ -0.22
PSMD8-208	ENST00000592561	GRAP	Q13588	217 aa		13.67	□□□□□ -0.22
PSMD8-208	ENST00000592561	TTLL6	Q8N841	843 aa		13.67	□□□□□ -0.22
PSMD8-208	ENST00000592561	GRAPL	Q8TC17	118 aa	Predicted RBP	13.67	□□□□□ -0.22
PSMD8-208	ENST00000592561	CRBN	Q96SW2	442 aa		13.67	□□□□□ -0.22
PSMD8-208	ENST00000592561	CDC5L	Q99459	802 aa	Known RBP	13.67	□□□□□ -0.22
PSMD8-208	ENST00000592561	SEC31B	Q9NQW1	1179 aa		13.67	□□□□□ -0.22
PSMD8-208	ENST00000592561	ANKRD18B	A2A2Z9	1011 aa		13.66	□□□□□ -0.22
PSMD8-208	ENST00000592561	BBOX1	O75936	387 aa		13.66	□□□□□ -0.22
PSMD8-208	ENST00000592561	IFIT5	Q13325	482 aa	Known RBP	13.66	□□□□□ -0.22
PSMD8-208	ENST00000592561	CCDC57	Q2TAC2	916 aa		13.66	□□□□□ -0.22
PSMD8-208	ENST00000592561	DALRD3	Q5D0E6	543 aa	Known RBP	13.66	□□□□□ -0.22
PSMD8-208	ENST00000592561	PRPF40B	Q6NWY9	871 aa	Known RBP	13.66	□□□□□ -0.22

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