RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-236ENST00000592051 EXOC6Q8TAG9 804 aa14.25□□□□□ -0.13
CIRBP-236ENST00000592051 NLRP3Q96P20 1036 aa14.25□□□□□ -0.13
CIRBP-236ENST00000592051 CCDC85AQ96PX6 553 aaPredicted RBP14.25□□□□□ -0.13
CIRBP-236ENST00000592051 SYT17Q9BSW7 474 aa14.25□□□□□ -0.13
CIRBP-236ENST00000592051 PPP1R1BQ9UD71 204 aaPredicted RBP14.25□□□□□ -0.13
CIRBP-236ENST00000592051 COL4A1P02462 1669 aa14.25□□□□□ -0.13
CIRBP-236ENST00000592051 SRCAPQ6ZRS2 3230 aa14.25□□□□□ -0.13
CIRBP-236ENST00000592051 DDX60Q8IY21 1712 aaKnown RBP14.24□□□□□ -0.13
CIRBP-236ENST00000592051 TGFB2P61812 414 aa14.24□□□□□ -0.13
CIRBP-236ENST00000592051 GREM2Q9H772 168 aa14.24□□□□□ -0.13
CIRBP-236ENST00000592051 SEC31BQ9NQW1 1179 aa14.24□□□□□ -0.13
CIRBP-236ENST00000592051 KIAA1551Q9HCM1 1747 aa14.24□□□□□ -0.13
CIRBP-236ENST00000592051 GNAI2P04899 355 aa14.23□□□□□ -0.13
CIRBP-236ENST00000592051 FAM161AQ3B820 660 aa14.23□□□□□ -0.13
CIRBP-236ENST00000592051 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
CIRBP-236ENST00000592051 KIF13BQ9NQT8 1826 aa14.22□□□□□ -0.13
CIRBP-236ENST00000592051 H0YIN7 160 aa14.22□□□□□ -0.13
CIRBP-236ENST00000592051 NPR1P16066 1061 aa14.22□□□□□ -0.13
CIRBP-236ENST00000592051 RFX5P48382 616 aaPredicted RBP14.22□□□□□ -0.13
CIRBP-236ENST00000592051 MTX1Q13505 466 aa14.22□□□□□ -0.13
CIRBP-236ENST00000592051 STYK1Q6J9G0 422 aa14.22□□□□□ -0.13
CIRBP-236ENST00000592051 SIRT2Q8IXJ6 389 aa14.22□□□□□ -0.13
CIRBP-236ENST00000592051 COL11A2P13942 1736 aaPredicted RBP14.21□□□□□ -0.13
CIRBP-236ENST00000592051 HSP90B1P14625 803 aaKnown RBP14.21□□□□□ -0.13
CIRBP-236ENST00000592051 CCDC152Q4G0S7 254 aa14.21□□□□□ -0.13
CIRBP-236ENST00000592051 CEP85Q6P2H3 762 aa14.21□□□□□ -0.13
CIRBP-236ENST00000592051 CELF1Q92879 486 aaKnown RBP14.21□□□□□ -0.13
CIRBP-236ENST00000592051 MASTLQ96GX5 879 aa14.21□□□□□ -0.13
CIRBP-236ENST00000592051 CRAMP1Q96RY5 1269 aa14.21□□□□□ -0.13
CIRBP-236ENST00000592051 PCDHB15Q9Y5E8 787 aa14.21□□□□□ -0.13
CIRBP-236ENST00000592051 LAMB2P55268 1798 aa14.2□□□□□ -0.14
CIRBP-236ENST00000592051 PNMA6EA0A0J9YXQ4 647 aa14.2□□□□□ -0.14
CIRBP-236ENST00000592051 ITGA6P23229 1130 aa14.2□□□□□ -0.14
CIRBP-236ENST00000592051 ATP8B2P98198 1209 aa14.2□□□□□ -0.14
CIRBP-236ENST00000592051 C7orf43Q8WVR3 580 aa14.2□□□□□ -0.14
CIRBP-236ENST00000592051 RPGRQ92834 1020 aaKnown RBP14.2□□□□□ -0.14
CIRBP-236ENST00000592051 ZNF622Q969S3 477 aaKnown RBP eCLIP14.2□□□□□ -0.14
CIRBP-236ENST00000592051 WWC3Q9ULE0 1092 aa14.2□□□□□ -0.14
CIRBP-236ENST00000592051 PDZRN3Q9UPQ7 1066 aa14.2□□□□□ -0.14
CIRBP-236ENST00000592051 POLA2Q14181 598 aa14.19□□□□□ -0.14
CIRBP-236ENST00000592051 KLHDC4Q8TBB5 520 aa14.19□□□□□ -0.14
CIRBP-236ENST00000592051 RBM17Q96I25 401 aaKnown RBP14.19□□□□□ -0.14
CIRBP-236ENST00000592051 ZNF594Q96JF6 807 aaPredicted RBP14.19□□□□□ -0.14
CIRBP-236ENST00000592051 GRAPQ13588 217 aa14.18□□□□□ -0.14
CIRBP-236ENST00000592051 PRPF40BQ6NWY9 871 aaKnown RBP14.18□□□□□ -0.14
CIRBP-236ENST00000592051 OLFM4Q6UX06 510 aa14.18□□□□□ -0.14
CIRBP-236ENST00000592051 DDX46Q7L014 1031 aaKnown RBP14.18□□□□□ -0.14
CIRBP-236ENST00000592051 GRAPLQ8TC17 118 aaPredicted RBP14.18□□□□□ -0.14
CIRBP-236ENST00000592051 HDAC5Q9UQL6 1122 aa14.18□□□□□ -0.14
CIRBP-236ENST00000592051 CHMP3Q9Y3E7 222 aa14.18□□□□□ -0.14
CIRBP-236ENST00000592051 RPS8P62241 208 aaKnown RBP14.17□□□□□ -0.14
CIRBP-236ENST00000592051 PTPN12Q05209 780 aaKnown RBP14.17□□□□□ -0.14
CIRBP-236ENST00000592051 IFIT5Q13325 482 aaKnown RBP14.17□□□□□ -0.14
CIRBP-236ENST00000592051 TTLL6Q8N841 843 aa14.17□□□□□ -0.14
CIRBP-236ENST00000592051 SSH3Q8TE77 659 aa14.17□□□□□ -0.14
CIRBP-236ENST00000592051 CNKSR1Q969H4 720 aa14.17□□□□□ -0.14
CIRBP-236ENST00000592051 PUS3Q9BZE2 481 aaKnown RBP14.17□□□□□ -0.14
CIRBP-236ENST00000592051 PIM2Q9P1W9 311 aa14.17□□□□□ -0.14
CIRBP-236ENST00000592051 PA2G4Q9UQ80 394 aaKnown RBP14.17□□□□□ -0.14
CIRBP-236ENST00000592051 ANKRD18BA2A2Z9 1011 aa14.16□□□□□ -0.14
CIRBP-236ENST00000592051 SRGAP3O43295 1099 aa14.16□□□□□ -0.14
CIRBP-236ENST00000592051 CHMP4BQ9H444 224 aaKnown RBP14.16□□□□□ -0.14
CIRBP-236ENST00000592051 PPEF1O14829 653 aaPredicted RBP14.15□□□□□ -0.14
CIRBP-236ENST00000592051 BBOX1O75936 387 aa14.15□□□□□ -0.14
CIRBP-236ENST00000592051 ALDH1B1P30837 517 aa14.15□□□□□ -0.14
CIRBP-236ENST00000592051 CCDC57Q2TAC2 916 aa14.15□□□□□ -0.14
CIRBP-236ENST00000592051 LRRC24Q50LG9 513 aa14.15□□□□□ -0.14
CIRBP-236ENST00000592051 DALRD3Q5D0E6 543 aaKnown RBP14.15□□□□□ -0.14
CIRBP-236ENST00000592051 RPAP2Q8IXW5 612 aaPredicted RBP14.15□□□□□ -0.14
CIRBP-236ENST00000592051 COPRSQ9NQ92 184 aa14.15□□□□□ -0.14
CIRBP-236ENST00000592051 SNED1Q8TER0 1413 aa14.15□□□□□ -0.14
CIRBP-236ENST00000592051 YBX3P16989 372 aaKnown RBP eCLIP14.14□□□□□ -0.15
CIRBP-236ENST00000592051 ATG9AQ7Z3C6 839 aa14.14□□□□□ -0.15
CIRBP-236ENST00000592051 ANKRD18AQ8IVF6 992 aa14.14□□□□□ -0.15
CIRBP-236ENST00000592051 CDC5LQ99459 802 aaKnown RBP14.14□□□□□ -0.15
CIRBP-236ENST00000592051 BSDC1Q9NW68 430 aaPredicted RBP14.14□□□□□ -0.15
CIRBP-236ENST00000592051 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
CIRBP-236ENST00000592051 ATP6V0A2Q9Y487 856 aa14.14□□□□□ -0.15
CIRBP-236ENST00000592051 RIPOR2Q9Y4F9 1068 aa14.14□□□□□ -0.15
CIRBP-236ENST00000592051 WTIPA6NIX2 430 aaPredicted RBP14.13□□□□□ -0.15
CIRBP-236ENST00000592051 C21orf2O43822 256 aa14.13□□□□□ -0.15
CIRBP-236ENST00000592051 AAMPQ13685 434 aa14.13□□□□□ -0.15
CIRBP-236ENST00000592051 SP8Q8IXZ3 490 aa14.13□□□□□ -0.15
CIRBP-236ENST00000592051 MINPP1Q9UNW1 487 aa14.13□□□□□ -0.15
CIRBP-236ENST00000592051 BCS1LQ9Y276 419 aa14.13□□□□□ -0.15
CIRBP-236ENST00000592051 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.13□□□□□ -0.15
CIRBP-236ENST00000592051 DLEC1Q9Y238 1755 aa14.13□□□□□ -0.15
CIRBP-236ENST00000592051 EYA2O00167 538 aa14.12□□□□□ -0.15
CIRBP-236ENST00000592051 LDHAL6AQ6ZMR3 332 aa14.12□□□□□ -0.15
CIRBP-236ENST00000592051 SIL1Q9H173 461 aa14.12□□□□□ -0.15
CIRBP-236ENST00000592051 NOP58Q9Y2X3 529 aaKnown RBP14.12□□□□□ -0.15
CIRBP-236ENST00000592051 SLX4Q8IY92 1834 aa14.12□□□□□ -0.15
CIRBP-236ENST00000592051 TAF1P21675 1872 aa14.12□□□□□ -0.15
CIRBP-236ENST00000592051 IGHDP01880 384 aa14.11□□□□□ -0.15
CIRBP-236ENST00000592051 IGHMBP2P38935 993 aaKnown RBP14.11□□□□□ -0.15
CIRBP-236ENST00000592051 GPSM2P81274 684 aa14.11□□□□□ -0.15
CIRBP-236ENST00000592051 TAF7LQ5H9L4 462 aa14.11□□□□□ -0.15
CIRBP-236ENST00000592051 SNAP23O00161 211 aa14.1□□□□□ -0.15
CIRBP-236ENST00000592051 CIAO1O76071 339 aa14.1□□□□□ -0.15
CIRBP-236ENST00000592051 TMC4Q7Z404 712 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms