RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 DBNLQ9UJU6 430 aaKnown RBP12.53□□□□□ -0.4
VPS25-206ENST00000591584 ANKRD18BA2A2Z9 1011 aa12.52□□□□□ -0.41
VPS25-206ENST00000591584 ZKSCAN1P17029 563 aaPredicted RBP12.52□□□□□ -0.41
VPS25-206ENST00000591584 HMGB2P26583 209 aaKnown RBP12.52□□□□□ -0.41
VPS25-206ENST00000591584 PSMA5P28066 241 aa12.52□□□□□ -0.41
VPS25-206ENST00000591584 TAF7LQ5H9L4 462 aa12.52□□□□□ -0.41
VPS25-206ENST00000591584 CCDC158Q5M9N0 1113 aa12.52□□□□□ -0.41
VPS25-206ENST00000591584 CLEC4GQ6UXB4 293 aa12.52□□□□□ -0.41
VPS25-206ENST00000591584 CLEC17AQ6ZS10 378 aa12.52□□□□□ -0.41
VPS25-206ENST00000591584 SPRYD3Q8NCJ5 442 aa12.52□□□□□ -0.41
VPS25-206ENST00000591584 HMG20BQ9P0W2 317 aa12.52□□□□□ -0.41
VPS25-206ENST00000591584 TRMT112Q9UI30 125 aaKnown RBP12.52□□□□□ -0.41
VPS25-206ENST00000591584 ZNF652Q9Y2D9 606 aa12.52□□□□□ -0.41
VPS25-206ENST00000591584 ABCC12Q96J65 1359 aa12.52□□□□□ -0.41
VPS25-206ENST00000591584 CD2BP2O95400 341 aaKnown RBP12.51□□□□□ -0.41
VPS25-206ENST00000591584 MCM4P33991 863 aa12.51□□□□□ -0.41
VPS25-206ENST00000591584 HLFQ16534 295 aa12.51□□□□□ -0.41
VPS25-206ENST00000591584 INTS5Q6P9B9 1019 aaKnown RBP12.51□□□□□ -0.41
VPS25-206ENST00000591584 MAP4K1Q92918 833 aa12.51□□□□□ -0.41
VPS25-206ENST00000591584 PALLDQ8WX93 1383 aa12.51□□□□□ -0.41
VPS25-206ENST00000591584 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
VPS25-206ENST00000591584 GOLGA6L22H0YM25 854 aa12.5□□□□□ -0.41
VPS25-206ENST00000591584 IRS4O14654 1257 aaPredicted RBP12.5□□□□□ -0.41
VPS25-206ENST00000591584 PDIA4P13667 645 aaKnown RBP12.5□□□□□ -0.41
VPS25-206ENST00000591584 CRKLP46109 303 aaKnown RBP12.5□□□□□ -0.41
VPS25-206ENST00000591584 CTSWP56202 376 aa12.5□□□□□ -0.41
VPS25-206ENST00000591584 CUL4AQ13619 759 aa12.5□□□□□ -0.41
VPS25-206ENST00000591584 SKOR2Q2VWA4 1001 aaPredicted RBP12.5□□□□□ -0.41
VPS25-206ENST00000591584 KBTBD3Q8NAB2 608 aa12.5□□□□□ -0.41
VPS25-206ENST00000591584 TTLL11Q8NHH1 800 aa12.5□□□□□ -0.41
VPS25-206ENST00000591584 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
VPS25-206ENST00000591584 NEUROD6Q96NK8 337 aa12.5□□□□□ -0.41
VPS25-206ENST00000591584 C8orf37Q96NL8 207 aa12.5□□□□□ -0.41
VPS25-206ENST00000591584 DBNDD2Q9BQY9 259 aa12.5□□□□□ -0.41
VPS25-206ENST00000591584 UTP14AQ9BVJ6 771 aaKnown RBP12.5□□□□□ -0.41
VPS25-206ENST00000591584 HELLSQ9NRZ9 838 aa12.5□□□□□ -0.41
VPS25-206ENST00000591584 TLR7Q9NYK1 1049 aaKnown RBP12.5□□□□□ -0.41
VPS25-206ENST00000591584 CCDC171Q6TFL3 1326 aa12.5□□□□□ -0.41
VPS25-206ENST00000591584 BCL9LQ86UU0 1499 aa12.5□□□□□ -0.41
VPS25-206ENST00000591584 NMIQ13287 307 aaPredicted RBP12.49□□□□□ -0.41
VPS25-206ENST00000591584 KRT32Q14532 448 aa12.49□□□□□ -0.41
VPS25-206ENST00000591584 NECTIN1Q15223 517 aa12.49□□□□□ -0.41
VPS25-206ENST00000591584 TSGA10IPQ3SY00 556 aa12.49□□□□□ -0.41
VPS25-206ENST00000591584 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
VPS25-206ENST00000591584 ACSBG1Q96GR2 724 aa12.49□□□□□ -0.41
VPS25-206ENST00000591584 ZNF512BQ96KM6 892 aaPredicted RBP12.49□□□□□ -0.41
VPS25-206ENST00000591584 ZSCAN31Q96LW9 406 aaPredicted RBP12.49□□□□□ -0.41
VPS25-206ENST00000591584 ALDH8A1Q9H2A2 487 aaPredicted RBP12.49□□□□□ -0.41
VPS25-206ENST00000591584 USP21Q9UK80 565 aa12.49□□□□□ -0.41
VPS25-206ENST00000591584 PALD1Q9ULE6 856 aa12.49□□□□□ -0.41
VPS25-206ENST00000591584 SNX14Q9Y5W7 946 aa12.49□□□□□ -0.41
VPS25-206ENST00000591584 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.49□□□□□ -0.41
VPS25-206ENST00000591584 SH3TC1Q8TE82 1336 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 A0A1B0GUL7 405 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 ZFYP08048 801 aaPredicted RBP12.48□□□□□ -0.41
VPS25-206ENST00000591584 KCNJ4P48050 445 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 GSE1Q14687 1217 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
VPS25-206ENST00000591584 MCMDC2Q4G0Z9 681 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 VPS53Q5VIR6 699 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 CERKQ8TCT0 537 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 TMX3Q96JJ7 454 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 FOXD4L1Q9NU39 408 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 TBC1D2BQ9UPU7 963 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 RIPOR2Q9Y4F9 1068 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
VPS25-206ENST00000591584 TJP1Q07157 1748 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
VPS25-206ENST00000591584 MED23Q9ULK4 1368 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 MROH5Q6ZUA9 1318 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 CNTNAP4Q9C0A0 1308 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 CAMTA2O94983 1202 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 IFIT1P09914 478 aaKnown RBP12.47□□□□□ -0.41
VPS25-206ENST00000591584 ITGA6P23229 1130 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 SSFA2P28290 1259 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 ANKRD1Q15327 319 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 LRRC24Q50LG9 513 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 GORABQ5T7V8 394 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 LDHAL6AQ6ZMR3 332 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 TNPO1Q92973 898 aaKnown RBP12.47□□□□□ -0.41
VPS25-206ENST00000591584 IL25Q9H293 177 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 ZSWIM6Q9HCJ5 1215 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 PAG1Q9NWQ8 432 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 CYP46A1Q9Y6A2 500 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 DOT1LQ8TEK3 1739 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 AK9Q5TCS8 1911 aa12.47□□□□□ -0.41
VPS25-206ENST00000591584 ZNF609O15014 1411 aa12.46□□□□□ -0.41
VPS25-206ENST00000591584 A0A0G2JS52 829 aa12.46□□□□□ -0.41
VPS25-206ENST00000591584 GPTP24298 496 aa12.46□□□□□ -0.41
VPS25-206ENST00000591584 DEKP35659 375 aaKnown RBP12.46□□□□□ -0.41
VPS25-206ENST00000591584 TIMM10P62072 90 aa12.46□□□□□ -0.41
VPS25-206ENST00000591584 ITPK1Q13572 414 aa12.46□□□□□ -0.41
VPS25-206ENST00000591584 TTC39AQ5SRH9 613 aa12.46□□□□□ -0.41
VPS25-206ENST00000591584 USPL1Q5W0Q7 1092 aa12.46□□□□□ -0.41
VPS25-206ENST00000591584 ZNF594Q96JF6 807 aaPredicted RBP12.46□□□□□ -0.41
VPS25-206ENST00000591584 DNAJC2Q99543 621 aaKnown RBP12.46□□□□□ -0.41
VPS25-206ENST00000591584 SH2B1Q9NRF2 756 aaPredicted RBP12.46□□□□□ -0.41
VPS25-206ENST00000591584 LIMCH1Q9UPQ0 1083 aa12.46□□□□□ -0.41
VPS25-206ENST00000591584 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.46□□□□□ -0.41
VPS25-206ENST00000591584 RBM8AQ9Y5S9 174 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms