RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TNS4Q8IZW8 715 aa12.44□□□□□ -0.42
BRCA1-226ENST00000591534 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-226ENST00000591534 PRAMEF22A3QJZ6 481 aa12.43□□□□□ -0.42
BRCA1-226ENST00000591534 DCTN1Q14203 1278 aa12.43□□□□□ -0.42
BRCA1-226ENST00000591534 COL13A1Q5TAT6 717 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-226ENST00000591534 PNMA8AQ86V59 439 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-226ENST00000591534 C7orf43Q8WVR3 580 aa12.43□□□□□ -0.42
BRCA1-226ENST00000591534 TMX4Q9H1E5 349 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-226ENST00000591534 FAM177BA6PVY3 158 aa12.42□□□□□ -0.42
BRCA1-226ENST00000591534 NBPF26B4DH59 902 aa12.42□□□□□ -0.42
BRCA1-226ENST00000591534 HSPA1AP0DMV8 641 aaKnown RBP12.42□□□□□ -0.42
BRCA1-226ENST00000591534 HSPA1BP0DMV9 641 aaKnown RBP12.42□□□□□ -0.42
BRCA1-226ENST00000591534 RBM26Q5T8P6 1007 aaKnown RBP12.42□□□□□ -0.42
BRCA1-226ENST00000591534 NBPF10Q6P3W6 841 aaKnown RBP12.42□□□□□ -0.42
BRCA1-226ENST00000591534 NBPF15Q8N660 670 aa12.42□□□□□ -0.42
BRCA1-226ENST00000591534 JDP2Q8WYK2 163 aa12.42□□□□□ -0.42
BRCA1-226ENST00000591534 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
BRCA1-226ENST00000591534 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
BRCA1-226ENST00000591534 MAPK8IP3Q9UPT6 1336 aa12.41□□□□□ -0.42
BRCA1-226ENST00000591534 TAF1DQ9H5J8 278 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-226ENST00000591534 ZNF277Q9NRM2 450 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-226ENST00000591534 SIPA1L3O60292 1781 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-226ENST00000591534 TIAM2Q8IVF5 1701 aa12.4□□□□□ -0.42
BRCA1-226ENST00000591534 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
BRCA1-226ENST00000591534 NGEFQ8N5V2 710 aa12.4□□□□□ -0.42
BRCA1-226ENST00000591534 PSMD1Q99460 953 aa12.4□□□□□ -0.42
BRCA1-226ENST00000591534 ERBB4Q15303 1308 aa12.39□□□□□ -0.43
BRCA1-226ENST00000591534 MAP3K15Q6ZN16 1313 aa12.39□□□□□ -0.43
BRCA1-226ENST00000591534 TMEM88BA6NKF7 163 aa12.39□□□□□ -0.43
BRCA1-226ENST00000591534 EIF6P56537 245 aaKnown RBP12.39□□□□□ -0.43
BRCA1-226ENST00000591534 NFE2L2Q16236 605 aa12.39□□□□□ -0.43
BRCA1-226ENST00000591534 HLFQ16534 295 aa12.39□□□□□ -0.43
BRCA1-226ENST00000591534 EAPPQ56P03 285 aaPredicted RBP12.39□□□□□ -0.43
BRCA1-226ENST00000591534 PPP1R42Q7Z4L9 355 aa12.39□□□□□ -0.43
BRCA1-226ENST00000591534 GPC2Q8N158 579 aa12.39□□□□□ -0.43
BRCA1-226ENST00000591534 SYNE4Q8N205 404 aa12.39□□□□□ -0.43
BRCA1-226ENST00000591534 AIDAQ96BJ3 306 aa12.39□□□□□ -0.43
BRCA1-226ENST00000591534 RBM17Q96I25 401 aaKnown RBP12.39□□□□□ -0.43
BRCA1-226ENST00000591534 SLC24A3Q9HC58 644 aa12.39□□□□□ -0.43
BRCA1-226ENST00000591534 MIS18AQ9NYP9 233 aa12.39□□□□□ -0.43
BRCA1-226ENST00000591534 RRP7AQ9Y3A4 280 aaKnown RBP12.39□□□□□ -0.43
BRCA1-226ENST00000591534 PCNTO95613 3336 aa12.39□□□□□ -0.43
BRCA1-226ENST00000591534 ANKRD31Q8N7Z5 1873 aa12.38□□□□□ -0.43
BRCA1-226ENST00000591534 FZD9O00144 591 aa12.38□□□□□ -0.43
BRCA1-226ENST00000591534 LMOD1P29536 600 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-226ENST00000591534 EPHX2P34913 555 aa12.38□□□□□ -0.43
BRCA1-226ENST00000591534 EIF4A1P60842 406 aaKnown RBP12.38□□□□□ -0.43
BRCA1-226ENST00000591534 CRY2Q49AN0 593 aa12.38□□□□□ -0.43
BRCA1-226ENST00000591534 MKRN1Q9UHC7 482 aaKnown RBP12.38□□□□□ -0.43
BRCA1-226ENST00000591534 ZNF316A6NFI3 1004 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-226ENST00000591534 MYL6BP14649 208 aa12.37□□□□□ -0.43
BRCA1-226ENST00000591534 HOXA10P31260 410 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-226ENST00000591534 LMOD3Q0VAK6 560 aa12.37□□□□□ -0.43
BRCA1-226ENST00000591534 PARP10Q53GL7 1025 aa12.37□□□□□ -0.43
BRCA1-226ENST00000591534 BABAM1Q9NWV8 329 aa12.37□□□□□ -0.43
BRCA1-226ENST00000591534 IBTKQ9P2D0 1353 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-226ENST00000591534 FER1L6Q2WGJ9 1857 aa12.37□□□□□ -0.43
BRCA1-226ENST00000591534 COL11A2P13942 1736 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-226ENST00000591534 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
BRCA1-226ENST00000591534 BCORQ6W2J9 1755 aa12.36□□□□□ -0.43
BRCA1-226ENST00000591534 CNTNAP1P78357 1384 aa12.36□□□□□ -0.43
BRCA1-226ENST00000591534 PDIA6Q15084 440 aa12.36□□□□□ -0.43
BRCA1-226ENST00000591534 NUTM1Q86Y26 1132 aa12.36□□□□□ -0.43
BRCA1-226ENST00000591534 NLRP3Q96P20 1036 aa12.36□□□□□ -0.43
BRCA1-226ENST00000591534 CRAMP1Q96RY5 1269 aa12.36□□□□□ -0.43
BRCA1-226ENST00000591534 VPS33BQ9H267 617 aa12.36□□□□□ -0.43
BRCA1-226ENST00000591534 TSPYL4Q9UJ04 414 aa12.36□□□□□ -0.43
BRCA1-226ENST00000591534 SLX4Q8IY92 1834 aa12.36□□□□□ -0.43
BRCA1-226ENST00000591534 ZNF541Q9H0D2 1346 aa12.36□□□□□ -0.43
BRCA1-226ENST00000591534 GPTP24298 496 aa12.35□□□□□ -0.43
BRCA1-226ENST00000591534 MAP3K9P80192 1104 aa12.35□□□□□ -0.43
BRCA1-226ENST00000591534 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
BRCA1-226ENST00000591534 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
BRCA1-226ENST00000591534 LARGE2Q8N3Y3 721 aa12.35□□□□□ -0.43
BRCA1-226ENST00000591534 SUPT20HQ8NEM7 779 aa12.35□□□□□ -0.43
BRCA1-226ENST00000591534 PLEKHF1Q96S99 279 aa12.35□□□□□ -0.43
BRCA1-226ENST00000591534 ZBTB3Q9H5J0 574 aa12.35□□□□□ -0.43
BRCA1-226ENST00000591534 RIC1Q4ADV7 1423 aa12.35□□□□□ -0.43
BRCA1-226ENST00000591534 RNF123Q5XPI4 1314 aa12.35□□□□□ -0.43
BRCA1-226ENST00000591534 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-226ENST00000591534 PPEF1O14829 653 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-226ENST00000591534 ITGBL1O95965 494 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-226ENST00000591534 CTCFP49711 727 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-226ENST00000591534 HSP90AB3PQ58FF7 597 aa12.34□□□□□ -0.43
BRCA1-226ENST00000591534 OLFM4Q6UX06 510 aa12.34□□□□□ -0.43
BRCA1-226ENST00000591534 TTLL7Q6ZT98 887 aa12.34□□□□□ -0.43
BRCA1-226ENST00000591534 NIM1KQ8IY84 436 aa12.34□□□□□ -0.43
BRCA1-226ENST00000591534 ZNF34Q8IZ26 560 aa12.34□□□□□ -0.43
BRCA1-226ENST00000591534 UTP14AQ9BVJ6 771 aaKnown RBP12.34□□□□□ -0.43
BRCA1-226ENST00000591534 GJA3Q9Y6H8 435 aa12.34□□□□□ -0.43
BRCA1-226ENST00000591534 DICER1Q9UPY3 1922 aaKnown RBP12.34□□□□□ -0.43
BRCA1-226ENST00000591534 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
BRCA1-226ENST00000591534 ZMYND10O75800 440 aa12.33□□□□□ -0.44
BRCA1-226ENST00000591534 RALBP1Q15311 655 aa12.33□□□□□ -0.44
BRCA1-226ENST00000591534 DEFB115Q30KQ5 88 aa12.33□□□□□ -0.44
BRCA1-226ENST00000591534 SUSD4Q5VX71 490 aa12.33□□□□□ -0.44
BRCA1-226ENST00000591534 PRDM10Q9NQV6 1147 aa12.33□□□□□ -0.44
BRCA1-226ENST00000591534 ARFGEF2Q9Y6D5 1785 aa12.33□□□□□ -0.44
BRCA1-226ENST00000591534 SCN4AP35499 1836 aa12.32□□□□□ -0.44
BRCA1-226ENST00000591534 BBOX1O75936 387 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms