RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PPP1R3GB7ZBB8 358 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 AP1G2O75843 785 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 GNAI1P63096 354 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 ITPK1Q13572 414 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 CCDC27Q2M243 656 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 PPP4R3BQ5MIZ7 849 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 DNAJC10Q8IXB1 793 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 KCTD17Q8N5Z5 321 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 LINC00116Q8NCU8 138 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 TATDN2Q93075 761 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 ZNF496Q96IT1 587 aaPredicted RBP8.29□□□□□ -1.08
VPS4B-205ENST00000591383 TMEM134Q9H6X4 195 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 PRM3Q9NNZ6 103 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 MBIPQ9NS73 344 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 LRRC4BQ9NT99 713 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 IFT57Q9NWB7 429 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 STK32BQ9NY57 414 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 TBC1D2BQ9UPU7 963 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 CASZ1Q86V15 1759 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 MYH14Q7Z406 1995 aaKnown RBP8.29□□□□□ -1.08
VPS4B-205ENST00000591383 FANCIQ9NVI1 1328 aa8.29□□□□□ -1.08
VPS4B-205ENST00000591383 BCORQ6W2J9 1755 aa8.28□□□□□ -1.08
VPS4B-205ENST00000591383 POM121CA8CG34 1229 aa8.28□□□□□ -1.08
VPS4B-205ENST00000591383 NBPF26B4DH59 902 aa8.28□□□□□ -1.08
VPS4B-205ENST00000591383 RIMBP2O15034 1052 aa8.28□□□□□ -1.08
VPS4B-205ENST00000591383 ZNF827Q17R98 1081 aa8.28□□□□□ -1.08
VPS4B-205ENST00000591383 ZNF710Q8N1W2 664 aa8.28□□□□□ -1.08
VPS4B-205ENST00000591383 NGEFQ8N5V2 710 aa8.28□□□□□ -1.08
VPS4B-205ENST00000591383 RETREG2Q8NC44 543 aa8.28□□□□□ -1.08
VPS4B-205ENST00000591383 CALR3Q96L12 384 aaKnown RBP8.28□□□□□ -1.08
VPS4B-205ENST00000591383 SLC4A9Q96Q91 983 aa8.28□□□□□ -1.08
VPS4B-205ENST00000591383 PNMA3Q9UL41 463 aa8.28□□□□□ -1.08
VPS4B-205ENST00000591383 IL16Q14005 1332 aa8.28□□□□□ -1.08
VPS4B-205ENST00000591383 PRAMEF22A3QJZ6 481 aa8.27□□□□□ -1.09
VPS4B-205ENST00000591383 PSDA5PKW4 1024 aaPredicted RBP8.27□□□□□ -1.09
VPS4B-205ENST00000591383 PTPREP23469 700 aa8.27□□□□□ -1.09
VPS4B-205ENST00000591383 R3HDM1Q15032 1099 aaKnown RBP8.27□□□□□ -1.09
VPS4B-205ENST00000591383 KRT24Q2M2I5 525 aa8.27□□□□□ -1.09
VPS4B-205ENST00000591383 MYH16Q9H6N6 1097 aa8.27□□□□□ -1.09
VPS4B-205ENST00000591383 ZBED9Q6R2W3 1325 aa8.27□□□□□ -1.09
VPS4B-205ENST00000591383 ZNF521Q96K83 1311 aa8.27□□□□□ -1.09
VPS4B-205ENST00000591383 CNTNAP4Q9C0A0 1308 aa8.27□□□□□ -1.09
VPS4B-205ENST00000591383 COL15A1P39059 1388 aa8.26□□□□□ -1.09
VPS4B-205ENST00000591383 TRIM6-TRIM34B2RNG4 842 aa8.26□□□□□ -1.09
VPS4B-205ENST00000591383 CHL1O00533 1208 aa8.26□□□□□ -1.09
VPS4B-205ENST00000591383 USP17L8P0C7I0 530 aa8.26□□□□□ -1.09
VPS4B-205ENST00000591383 CRKLP46109 303 aaKnown RBP8.26□□□□□ -1.09
VPS4B-205ENST00000591383 EIF4A1P60842 406 aaKnown RBP8.26□□□□□ -1.09
VPS4B-205ENST00000591383 NBPF14Q5TI25 921 aa8.26□□□□□ -1.09
VPS4B-205ENST00000591383 PRPF38BQ5VTL8 546 aaKnown RBP8.26□□□□□ -1.09
VPS4B-205ENST00000591383 WDR63Q8IWG1 891 aa8.26□□□□□ -1.09
VPS4B-205ENST00000591383 GLMNQ92990 594 aa8.26□□□□□ -1.09
VPS4B-205ENST00000591383 CCDC87Q9NVE4 849 aa8.26□□□□□ -1.09
VPS4B-205ENST00000591383 BABAM1Q9NWV8 329 aa8.26□□□□□ -1.09
VPS4B-205ENST00000591383 TFCP2L1Q9NZI6 479 aa8.26□□□□□ -1.09
VPS4B-205ENST00000591383 ZBTB1Q9Y2K1 713 aa8.26□□□□□ -1.09
VPS4B-205ENST00000591383 KDM4AO75164 1064 aa8.25□□□□□ -1.09
VPS4B-205ENST00000591383 STARD3NLO95772 234 aa8.25□□□□□ -1.09
VPS4B-205ENST00000591383 SNRPA1P09661 255 aaKnown RBP8.25□□□□□ -1.09
VPS4B-205ENST00000591383 ZNF853P0CG23 659 aa8.25□□□□□ -1.09
VPS4B-205ENST00000591383 CANXP27824 592 aaKnown RBP8.25□□□□□ -1.09
VPS4B-205ENST00000591383 PIP4K2AP48426 406 aaPredicted RBP8.25□□□□□ -1.09
VPS4B-205ENST00000591383 HDGFL1Q5TGJ6 251 aa8.25□□□□□ -1.09
VPS4B-205ENST00000591383 PACS2Q86VP3 889 aa8.25□□□□□ -1.09
VPS4B-205ENST00000591383 E9PSI1 815 aa8.24□□□□□ -1.09
VPS4B-205ENST00000591383 ELL2O00472 640 aaPredicted RBP8.24□□□□□ -1.09
VPS4B-205ENST00000591383 GIGYF1O75420 1035 aaPredicted RBP8.24□□□□□ -1.09
VPS4B-205ENST00000591383 CYP19A1P11511 503 aaPredicted RBP8.24□□□□□ -1.09
VPS4B-205ENST00000591383 EIF2S2P20042 333 aaKnown RBP8.24□□□□□ -1.09
VPS4B-205ENST00000591383 SLC15A2Q16348 729 aa8.24□□□□□ -1.09
VPS4B-205ENST00000591383 DUSP27Q5VZP5 1158 aa8.24□□□□□ -1.09
VPS4B-205ENST00000591383 SMIM5Q71RC9 77 aa8.24□□□□□ -1.09
VPS4B-205ENST00000591383 RDH13Q8NBN7 331 aa8.24□□□□□ -1.09
VPS4B-205ENST00000591383 ARFGEF2Q9Y6D5 1785 aa8.24□□□□□ -1.09
VPS4B-205ENST00000591383 SOS1Q07889 1333 aaPredicted RBP8.24□□□□□ -1.09
VPS4B-205ENST00000591383 PNPLA7Q6ZV29 1317 aa8.24□□□□□ -1.09
VPS4B-205ENST00000591383 ANKRD36CQ5JPF3 1778 aa8.23□□□□□ -1.09
VPS4B-205ENST00000591383 SMAPO00193 183 aa8.23□□□□□ -1.09
VPS4B-205ENST00000591383 POTEJP0CG39 1038 aa8.23□□□□□ -1.09
VPS4B-205ENST00000591383 MYL6BP14649 208 aa8.23□□□□□ -1.09
VPS4B-205ENST00000591383 GCGRP47871 477 aa8.23□□□□□ -1.09
VPS4B-205ENST00000591383 EXOSC9Q06265 439 aaKnown RBP8.23□□□□□ -1.09
VPS4B-205ENST00000591383 IRF5Q13568 498 aa8.23□□□□□ -1.09
VPS4B-205ENST00000591383 AMIGO3Q86WK7 504 aa8.23□□□□□ -1.09
VPS4B-205ENST00000591383 C8orf58Q8NAV2 365 aa8.23□□□□□ -1.09
VPS4B-205ENST00000591383 TEX13AQ9BXU3 409 aaPredicted RBP8.23□□□□□ -1.09
VPS4B-205ENST00000591383 ZBTB3Q9H5J0 574 aa8.23□□□□□ -1.09
VPS4B-205ENST00000591383 RTCBQ9Y3I0 505 aaKnown RBP8.23□□□□□ -1.09
VPS4B-205ENST00000591383 HOXA2O43364 376 aa8.22□□□□□ -1.09
VPS4B-205ENST00000591383 ANXA1P04083 346 aa8.22□□□□□ -1.09
VPS4B-205ENST00000591383 A1BGP04217 495 aa8.22□□□□□ -1.09
VPS4B-205ENST00000591383 HOXB7P09629 217 aa8.22□□□□□ -1.09
VPS4B-205ENST00000591383 HMGB2P26583 209 aaKnown RBP8.22□□□□□ -1.09
VPS4B-205ENST00000591383 SSFA2P28290 1259 aa8.22□□□□□ -1.09
VPS4B-205ENST00000591383 USP46P62068 366 aa8.22□□□□□ -1.09
VPS4B-205ENST00000591383 TWISTNBQ3B726 338 aaPredicted RBP8.22□□□□□ -1.09
VPS4B-205ENST00000591383 MSL1Q68DK7 614 aa8.22□□□□□ -1.09
VPS4B-205ENST00000591383 INTS5Q6P9B9 1019 aaKnown RBP8.22□□□□□ -1.09
VPS4B-205ENST00000591383 TSPYL6Q8N831 410 aa8.22□□□□□ -1.09
VPS4B-205ENST00000591383 CHPF2Q9P2E5 772 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms