RNA–Protein interactions for RNA: ENST00000591259.5

HKR1-220, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 1 (best) BASIC

Gene HKR1, Length 734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-220ENST00000591259 GRAPQ13588 217 aa17.3■□□□□ 0.36
HKR1-220ENST00000591259 GRAPLQ8TC17 118 aaPredicted RBP17.3■□□□□ 0.36
HKR1-220ENST00000591259 SRCIN1Q9C0H9 1055 aa17.3■□□□□ 0.36
HKR1-220ENST00000591259 TAOK3Q9H2K8 898 aa17.3■□□□□ 0.36
HKR1-220ENST00000591259 NOB1Q9ULX3 412 aaKnown RBP17.3■□□□□ 0.36
HKR1-220ENST00000591259 CACNA1FO60840 1977 aa17.29■□□□□ 0.36
HKR1-220ENST00000591259 LMNB1P20700 586 aa17.29■□□□□ 0.36
HKR1-220ENST00000591259 CASP7P55210 303 aa17.29■□□□□ 0.36
HKR1-220ENST00000591259 CTSWP56202 376 aa17.29■□□□□ 0.36
HKR1-220ENST00000591259 CCDC152Q4G0S7 254 aa17.29■□□□□ 0.36
HKR1-220ENST00000591259 RTKN2Q8IZC4 609 aa17.29■□□□□ 0.36
HKR1-220ENST00000591259 CHD4Q14839 1912 aa17.29■□□□□ 0.36
HKR1-220ENST00000591259 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
HKR1-220ENST00000591259 LAMB2P55268 1798 aa17.28■□□□□ 0.36
HKR1-220ENST00000591259 ALDH1L1O75891 902 aa17.28■□□□□ 0.36
HKR1-220ENST00000591259 BBOX1O75936 387 aa17.28■□□□□ 0.36
HKR1-220ENST00000591259 BRPF1P55201 1214 aaPredicted RBP17.28■□□□□ 0.36
HKR1-220ENST00000591259 ZNF784Q8NCA9 323 aaPredicted RBP17.28■□□□□ 0.36
HKR1-220ENST00000591259 CELF1Q92879 486 aaKnown RBP17.28■□□□□ 0.36
HKR1-220ENST00000591259 SEC31BQ9NQW1 1179 aa17.28■□□□□ 0.36
HKR1-220ENST00000591259 ATP6V0A2Q9Y487 856 aa17.28■□□□□ 0.36
HKR1-220ENST00000591259 LTBP3Q9NS15 1303 aa17.27■□□□□ 0.36
HKR1-220ENST00000591259 GRM8O00222 908 aa17.27■□□□□ 0.36
HKR1-220ENST00000591259 NPM3O75607 178 aaKnown RBP17.27■□□□□ 0.36
HKR1-220ENST00000591259 BCAR3O75815 825 aa17.27■□□□□ 0.36
HKR1-220ENST00000591259 FKBP4Q02790 459 aaKnown RBP eCLIP17.27■□□□□ 0.36
HKR1-220ENST00000591259 CC2D2BQ6DHV5 1058 aa17.27■□□□□ 0.36
HKR1-220ENST00000591259 TMX4Q9H1E5 349 aaPredicted RBP17.27■□□□□ 0.36
HKR1-220ENST00000591259 C9orf78Q9NZ63 289 aaPredicted RBP17.27■□□□□ 0.36
HKR1-220ENST00000591259 KIF16BQ96L93 1317 aa17.26■□□□□ 0.35
HKR1-220ENST00000591259 TTLL11Q8NHH1 800 aa17.26■□□□□ 0.35
HKR1-220ENST00000591259 PLA2G12BQ9BX93 195 aa17.26■□□□□ 0.35
HKR1-220ENST00000591259 ZNF277Q9NRM2 450 aaPredicted RBP17.26■□□□□ 0.35
HKR1-220ENST00000591259 SNED1Q8TER0 1413 aa17.26■□□□□ 0.35
HKR1-220ENST00000591259 SP8Q8IXZ3 490 aa17.25■□□□□ 0.35
HKR1-220ENST00000591259 ZNF526Q8TF50 670 aaPredicted RBP17.25■□□□□ 0.35
HKR1-220ENST00000591259 API5Q9BZZ5 524 aaKnown RBP17.25■□□□□ 0.35
HKR1-220ENST00000591259 GREM2Q9H772 168 aa17.25■□□□□ 0.35
HKR1-220ENST00000591259 COL4A1P02462 1669 aa17.25■□□□□ 0.35
HKR1-220ENST00000591259 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
HKR1-220ENST00000591259 TMC4Q7Z404 712 aa17.24■□□□□ 0.35
HKR1-220ENST00000591259 FRAT1Q92837 279 aaPredicted RBP17.24■□□□□ 0.35
HKR1-220ENST00000591259 GRIPAP1Q4V328 841 aa17.23■□□□□ 0.35
HKR1-220ENST00000591259 PSMD1Q99460 953 aa17.23■□□□□ 0.35
HKR1-220ENST00000591259 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
HKR1-220ENST00000591259 NBPF7P0C2Y1 421 aaPredicted RBP17.22■□□□□ 0.35
HKR1-220ENST00000591259 FOXO4P98177 505 aa17.22■□□□□ 0.35
HKR1-220ENST00000591259 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
HKR1-220ENST00000591259 DPP8Q6V1X1 898 aaPredicted RBP17.22■□□□□ 0.35
HKR1-220ENST00000591259 ANKRD18AQ8IVF6 992 aa17.22■□□□□ 0.35
HKR1-220ENST00000591259 ARHGAP45Q92619 1136 aa17.22■□□□□ 0.35
HKR1-220ENST00000591259 CDC5LQ99459 802 aaKnown RBP17.22■□□□□ 0.35
HKR1-220ENST00000591259 RTL9Q8NET4 1388 aa17.21■□□□□ 0.35
HKR1-220ENST00000591259 IPO8O15397 1037 aaKnown RBP17.21■□□□□ 0.35
HKR1-220ENST00000591259 CSF1RP07333 972 aa17.21■□□□□ 0.35
HKR1-220ENST00000591259 IARSP41252 1262 aaKnown RBP17.21■□□□□ 0.35
HKR1-220ENST00000591259 CCT4P50991 539 aaKnown RBP17.21■□□□□ 0.35
HKR1-220ENST00000591259 EPHA10Q5JZY3 1008 aa17.21■□□□□ 0.35
HKR1-220ENST00000591259 MPNDQ8N594 471 aa17.21■□□□□ 0.35
HKR1-220ENST00000591259 SUCLG2Q96I99 432 aa17.21■□□□□ 0.35
HKR1-220ENST00000591259 YTHDC1Q96MU7 727 aaKnown RBP17.21■□□□□ 0.35
HKR1-220ENST00000591259 CHMP3Q9Y3E7 222 aa17.21■□□□□ 0.35
HKR1-220ENST00000591259 UTYO14607 1347 aa17.21■□□□□ 0.34
HKR1-220ENST00000591259 TRIM27P14373 513 aa17.2■□□□□ 0.34
HKR1-220ENST00000591259 ITGA6P23229 1130 aa17.2■□□□□ 0.34
HKR1-220ENST00000591259 LMBR1LQ6UX01 489 aa17.2■□□□□ 0.34
HKR1-220ENST00000591259 GPBP1L1Q9HC44 474 aaPredicted RBP17.2■□□□□ 0.34
HKR1-220ENST00000591259 TNNQ9UQP3 1299 aa17.2■□□□□ 0.34
HKR1-220ENST00000591259 ZC3H4Q9UPT8 1303 aaKnown RBP17.2■□□□□ 0.34
HKR1-220ENST00000591259 GPSM2P81274 684 aa17.19■□□□□ 0.34
HKR1-220ENST00000591259 ATF7IPQ6VMQ6 1270 aa17.19■□□□□ 0.34
HKR1-220ENST00000591259 RTFDC1Q9BY42 306 aaPredicted RBP17.19■□□□□ 0.34
HKR1-220ENST00000591259 USP44Q9H0E7 712 aa17.19■□□□□ 0.34
HKR1-220ENST00000591259 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
HKR1-220ENST00000591259 TAF1P21675 1872 aa17.18■□□□□ 0.34
HKR1-220ENST00000591259 AOC3Q16853 763 aa17.18■□□□□ 0.34
HKR1-220ENST00000591259 LARGE2Q8N3Y3 721 aa17.18■□□□□ 0.34
HKR1-220ENST00000591259 SUPT20HQ8NEM7 779 aa17.18■□□□□ 0.34
HKR1-220ENST00000591259 CLUAP1Q96AJ1 413 aa17.18■□□□□ 0.34
HKR1-220ENST00000591259 KAZALD1Q96I82 304 aa17.18■□□□□ 0.34
HKR1-220ENST00000591259 SBF1O95248 1867 aa17.18■□□□□ 0.34
HKR1-220ENST00000591259 ANKRD18BA2A2Z9 1011 aa17.17■□□□□ 0.34
HKR1-220ENST00000591259 PPIP5K2O43314 1243 aa17.17■□□□□ 0.34
HKR1-220ENST00000591259 IGHMBP2P38935 993 aaKnown RBP17.17■□□□□ 0.34
HKR1-220ENST00000591259 IFIT5Q13325 482 aaKnown RBP17.17■□□□□ 0.34
HKR1-220ENST00000591259 ZKSCAN2Q63HK3 967 aa17.17■□□□□ 0.34
HKR1-220ENST00000591259 BICC1Q9H694 974 aaKnown RBP17.17■□□□□ 0.34
HKR1-220ENST00000591259 JDP2Q8WYK2 163 aa17.16■□□□□ 0.34
HKR1-220ENST00000591259 BSDC1Q9NW68 430 aaPredicted RBP17.16■□□□□ 0.34
HKR1-220ENST00000591259 ANKIB1Q9P2G1 1089 aa17.16■□□□□ 0.34
HKR1-220ENST00000591259 KDM2BQ8NHM5 1336 aa17.16■□□□□ 0.34
HKR1-220ENST00000591259 LRRC37AA6NMS7 1700 aa17.16■□□□□ 0.34
HKR1-220ENST00000591259 TIAM2Q8IVF5 1701 aa17.16■□□□□ 0.34
HKR1-220ENST00000591259 DUOX1Q9NRD9 1551 aa17.15■□□□□ 0.34
HKR1-220ENST00000591259 GLTPD2A6NH11 291 aa17.15■□□□□ 0.34
HKR1-220ENST00000591259 C6orf229H3BNL8 230 aa17.15■□□□□ 0.34
HKR1-220ENST00000591259 UBTFL1P0CB47 393 aaPredicted RBP17.15■□□□□ 0.34
HKR1-220ENST00000591259 CCDC57Q2TAC2 916 aa17.15■□□□□ 0.34
HKR1-220ENST00000591259 INTS3Q68E01 1043 aaKnown RBP17.15■□□□□ 0.34
HKR1-220ENST00000591259 ANKRD44Q8N8A2 993 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms