RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 VEGFAP15692 232 aaPredicted RBP15.49■□□□□ 0.07
CTDP1-206ENST00000590635 OLFM4Q6UX06 510 aa15.49■□□□□ 0.07
CTDP1-206ENST00000590635 MIER1Q8N108 512 aa15.49■□□□□ 0.07
CTDP1-206ENST00000590635 ZNF277Q9NRM2 450 aaPredicted RBP15.49■□□□□ 0.07
CTDP1-206ENST00000590635 CACNA1FO60840 1977 aa15.48■□□□□ 0.07
CTDP1-206ENST00000590635 RPS8P62241 208 aaKnown RBP15.48■□□□□ 0.07
CTDP1-206ENST00000590635 MPNDQ8N594 471 aa15.48■□□□□ 0.07
CTDP1-206ENST00000590635 RRAGCQ9HB90 399 aa15.48■□□□□ 0.07
CTDP1-206ENST00000590635 NMRK2Q9NPI5 230 aa15.48■□□□□ 0.07
CTDP1-206ENST00000590635 H7C1W4 665 aa15.47■□□□□ 0.07
CTDP1-206ENST00000590635 GCKRQ14397 625 aa15.47■□□□□ 0.07
CTDP1-206ENST00000590635 DPP8Q6V1X1 898 aaPredicted RBP15.47■□□□□ 0.07
CTDP1-206ENST00000590635 RTFDC1Q9BY42 306 aaPredicted RBP15.47■□□□□ 0.07
CTDP1-206ENST00000590635 CWF19L2Q2TBE0 894 aaKnown RBP15.46■□□□□ 0.07
CTDP1-206ENST00000590635 ALDH1L2Q3SY69 923 aa15.46■□□□□ 0.07
CTDP1-206ENST00000590635 TRMT2AQ8IZ69 625 aaKnown RBP15.46■□□□□ 0.07
CTDP1-206ENST00000590635 LARGE2Q8N3Y3 721 aa15.46■□□□□ 0.07
CTDP1-206ENST00000590635 SNED1Q8TER0 1413 aa15.45■□□□□ 0.06
CTDP1-206ENST00000590635 IQCA1LA6NCM1 817 aa15.45■□□□□ 0.06
CTDP1-206ENST00000590635 FZD9O00144 591 aa15.45■□□□□ 0.06
CTDP1-206ENST00000590635 EIF6P56537 245 aaKnown RBP15.45■□□□□ 0.06
CTDP1-206ENST00000590635 RBM46Q8TBY0 533 aaKnown RBP15.45■□□□□ 0.06
CTDP1-206ENST00000590635 CELF1Q92879 486 aaKnown RBP15.45■□□□□ 0.06
CTDP1-206ENST00000590635 CDC5LQ99459 802 aaKnown RBP15.45■□□□□ 0.06
CTDP1-206ENST00000590635 PTPRCP08575 1304 aa15.44■□□□□ 0.06
CTDP1-206ENST00000590635 CACNA1SQ13698 1873 aa15.44■□□□□ 0.06
CTDP1-206ENST00000590635 CTSWP56202 376 aa15.44■□□□□ 0.06
CTDP1-206ENST00000590635 BEND3Q5T5X7 828 aa15.44■□□□□ 0.06
CTDP1-206ENST00000590635 UBE3BQ7Z3V4 1068 aa15.44■□□□□ 0.06
CTDP1-206ENST00000590635 NIM1KQ8IY84 436 aa15.44■□□□□ 0.06
CTDP1-206ENST00000590635 CDCA7LQ96GN5 454 aa15.44■□□□□ 0.06
CTDP1-206ENST00000590635 PLA2G12BQ9BX93 195 aa15.44■□□□□ 0.06
CTDP1-206ENST00000590635 PPIP5K2O43314 1243 aa15.43■□□□□ 0.06
CTDP1-206ENST00000590635 ALDH1L1O75891 902 aa15.43■□□□□ 0.06
CTDP1-206ENST00000590635 FSTL1Q12841 308 aa15.43■□□□□ 0.06
CTDP1-206ENST00000590635 ANKRD18AQ8IVF6 992 aa15.43■□□□□ 0.06
CTDP1-206ENST00000590635 GPC2Q8N158 579 aa15.43■□□□□ 0.06
CTDP1-206ENST00000590635 MRPL50Q8N5N7 158 aaKnown RBP15.43■□□□□ 0.06
CTDP1-206ENST00000590635 TTLL11Q8NHH1 800 aa15.43■□□□□ 0.06
CTDP1-206ENST00000590635 JARID2Q92833 1246 aaPredicted RBP15.43■□□□□ 0.06
CTDP1-206ENST00000590635 NSFL1CQ9UNZ2 370 aaKnown RBP15.43■□□□□ 0.06
CTDP1-206ENST00000590635 F6X3S4 739 aa15.42■□□□□ 0.06
CTDP1-206ENST00000590635 DDNO94850 711 aaPredicted RBP15.42■□□□□ 0.06
CTDP1-206ENST00000590635 L3MBTL3Q96JM7 780 aaPredicted RBP15.42■□□□□ 0.06
CTDP1-206ENST00000590635 EYA3Q99504 573 aa15.42■□□□□ 0.06
CTDP1-206ENST00000590635 SRCIN1Q9C0H9 1055 aa15.42■□□□□ 0.06
CTDP1-206ENST00000590635 DICER1Q9UPY3 1922 aaKnown RBP15.42■□□□□ 0.06
CTDP1-206ENST00000590635 CCDC88AQ3V6T2 1871 aa15.42■□□□□ 0.06
CTDP1-206ENST00000590635 RTL9Q8NET4 1388 aa15.41■□□□□ 0.06
CTDP1-206ENST00000590635 KIAA2012Q0VF49 1180 aa15.41■□□□□ 0.06
CTDP1-206ENST00000590635 SLC4A10Q6U841 1118 aa15.41■□□□□ 0.06
CTDP1-206ENST00000590635 SMC1BQ8NDV3 1235 aa15.41■□□□□ 0.06
CTDP1-206ENST00000590635 SSH1Q8WYL5 1049 aa15.41■□□□□ 0.06
CTDP1-206ENST00000590635 SEC31BQ9NQW1 1179 aa15.41■□□□□ 0.06
CTDP1-206ENST00000590635 PODXL2Q9NZ53 605 aa15.41■□□□□ 0.06
CTDP1-206ENST00000590635 C9orf78Q9NZ63 289 aaPredicted RBP15.41■□□□□ 0.06
CTDP1-206ENST00000590635 ZNRF3Q9ULT6 936 aa15.41■□□□□ 0.06
CTDP1-206ENST00000590635 DDX60Q8IY21 1712 aaKnown RBP15.4■□□□□ 0.06
CTDP1-206ENST00000590635 GRM8O00222 908 aa15.4■□□□□ 0.06
CTDP1-206ENST00000590635 CSF1RP07333 972 aa15.4■□□□□ 0.06
CTDP1-206ENST00000590635 CASP7P55210 303 aa15.4■□□□□ 0.06
CTDP1-206ENST00000590635 WASHC4Q2M389 1173 aa15.4■□□□□ 0.06
CTDP1-206ENST00000590635 BSDC1Q9NW68 430 aaPredicted RBP15.4■□□□□ 0.06
CTDP1-206ENST00000590635 ANKIB1Q9P2G1 1089 aa15.4■□□□□ 0.06
CTDP1-206ENST00000590635 POTECB2RU33 542 aa15.39■□□□□ 0.05
CTDP1-206ENST00000590635 C6orf229H3BNL8 230 aa15.39■□□□□ 0.05
CTDP1-206ENST00000590635 HSPA6P17066 643 aa15.39■□□□□ 0.05
CTDP1-206ENST00000590635 IGHMBP2P38935 993 aaKnown RBP15.39■□□□□ 0.05
CTDP1-206ENST00000590635 BRPF1P55201 1214 aaPredicted RBP15.39■□□□□ 0.05
CTDP1-206ENST00000590635 AOC3Q16853 763 aa15.39■□□□□ 0.05
CTDP1-206ENST00000590635 CCDC85AQ96PX6 553 aaPredicted RBP15.39■□□□□ 0.05
CTDP1-206ENST00000590635 GREM2Q9H772 168 aa15.39■□□□□ 0.05
CTDP1-206ENST00000590635 SMC4Q9NTJ3 1288 aa15.39■□□□□ 0.05
CTDP1-206ENST00000590635 TIAM2Q8IVF5 1701 aa15.39■□□□□ 0.05
CTDP1-206ENST00000590635 LAMB2P55268 1798 aa15.39■□□□□ 0.05
CTDP1-206ENST00000590635 HNRNPUQ00839 825 aaKnown RBP eCLIP15.38■□□□□ 0.05
CTDP1-206ENST00000590635 TNIP1Q15025 636 aa15.38■□□□□ 0.05
CTDP1-206ENST00000590635 PNMA8AQ86V59 439 aaPredicted RBP15.38■□□□□ 0.05
CTDP1-206ENST00000590635 ZC3H12CQ9C0D7 883 aaKnown RBP15.38■□□□□ 0.05
CTDP1-206ENST00000590635 HACL1Q9UJ83 578 aa15.38■□□□□ 0.05
CTDP1-206ENST00000590635 GGA1Q9UJY5 639 aa15.38■□□□□ 0.05
CTDP1-206ENST00000590635 ZNF541Q9H0D2 1346 aa15.38■□□□□ 0.05
CTDP1-206ENST00000590635 WDR90Q96KV7 1748 aa15.37■□□□□ 0.05
CTDP1-206ENST00000590635 ITGA6P23229 1130 aa15.37■□□□□ 0.05
CTDP1-206ENST00000590635 LMOD1P29536 600 aaPredicted RBP15.37■□□□□ 0.05
CTDP1-206ENST00000590635 GPSM2P81274 684 aa15.37■□□□□ 0.05
CTDP1-206ENST00000590635 TBC1D16Q8TBP0 767 aa15.37■□□□□ 0.05
CTDP1-206ENST00000590635 MPHOSPH8Q99549 860 aa15.37■□□□□ 0.05
CTDP1-206ENST00000590635 GJA3Q9Y6H8 435 aa15.37■□□□□ 0.05
CTDP1-206ENST00000590635 XDHP47989 1333 aa15.37■□□□□ 0.05
CTDP1-206ENST00000590635 ANKRD18BA2A2Z9 1011 aa15.36■□□□□ 0.05
CTDP1-206ENST00000590635 G3V3G9 751 aa15.36■□□□□ 0.05
CTDP1-206ENST00000590635 ATP2B4P23634 1241 aa15.36■□□□□ 0.05
CTDP1-206ENST00000590635 IFIT5Q13325 482 aaKnown RBP15.36■□□□□ 0.05
CTDP1-206ENST00000590635 DCAF8Q5TAQ9 597 aa15.36■□□□□ 0.05
CTDP1-206ENST00000590635 TAF1DQ9H5J8 278 aaPredicted RBP15.36■□□□□ 0.05
CTDP1-206ENST00000590635 POLLQ9UGP5 575 aa15.36■□□□□ 0.05
CTDP1-206ENST00000590635 UFL1O94874 794 aa15.35■□□□□ 0.05
CTDP1-206ENST00000590635 APLP1P51693 650 aa15.35■□□□□ 0.05
CTDP1-206ENST00000590635 CCDC57Q2TAC2 916 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms