RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 CEP152O94986 1710 aa19.94■□□□□ 0.78
SMARCA4-215ENST00000590574 SLC27A2O14975 620 aa19.94■□□□□ 0.78
SMARCA4-215ENST00000590574 CHRNA2Q15822 529 aa19.94■□□□□ 0.78
SMARCA4-215ENST00000590574 GNL3LQ9NVN8 582 aaKnown RBP19.94■□□□□ 0.78
SMARCA4-215ENST00000590574 TMOD3Q9NYL9 352 aa19.94■□□□□ 0.78
SMARCA4-215ENST00000590574 TBX22Q9Y458 520 aa19.94■□□□□ 0.78
SMARCA4-215ENST00000590574 TMC6Q7Z403 805 aa19.94■□□□□ 0.78
SMARCA4-215ENST00000590574 NFATC2IPQ8NCF5 419 aa19.94■□□□□ 0.78
SMARCA4-215ENST00000590574 RAD21O60216 631 aa19.93■□□□□ 0.78
SMARCA4-215ENST00000590574 LUZP1Q86V48 1076 aa19.93■□□□□ 0.78
SMARCA4-215ENST00000590574 IL17REQ8NFR9 667 aa19.93■□□□□ 0.78
SMARCA4-215ENST00000590574 PTGS1P23219 599 aa19.93■□□□□ 0.78
SMARCA4-215ENST00000590574 SETBP1Q9Y6X0 1596 aa19.93■□□□□ 0.78
SMARCA4-215ENST00000590574 HSP90B2PQ58FF3 399 aa19.93■□□□□ 0.78
SMARCA4-215ENST00000590574 SPDYE4A6NLX3 237 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 HOXB7P09629 217 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 CEP135Q66GS9 1140 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 ISM2Q6H9L7 571 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 SSH3Q8TE77 659 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 LRP2BPQ9P2M1 347 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 TXLNAP40222 546 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 GSDMDP57764 484 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 KLHDC4Q8TBB5 520 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 CDK12Q9NYV4 1490 aaPredicted RBP19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 CGNQ9P2M7 1197 aaKnown RBP19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 TMEM2Q9UHN6 1383 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 SSH2Q76I76 1423 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 CCDC66A2RUB6 948 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 RPS6KB1P23443 525 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 CCDC144CPQ8IYA2 1237 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 NPHP3Q7Z494 1330 aa19.92■□□□□ 0.78
SMARCA4-215ENST00000590574 EIF4A1P60842 406 aaKnown RBP19.91■□□□□ 0.78
SMARCA4-215ENST00000590574 NAPBQ9H115 298 aa19.91■□□□□ 0.78
SMARCA4-215ENST00000590574 IQGAP1P46940 1657 aa19.91■□□□□ 0.78
SMARCA4-215ENST00000590574 GCP02774 474 aa19.91■□□□□ 0.78
SMARCA4-215ENST00000590574 FAM173BQ6P4H8 233 aa19.91■□□□□ 0.78
SMARCA4-215ENST00000590574 CCDC82Q8N4S0 544 aa19.91■□□□□ 0.78
SMARCA4-215ENST00000590574 ZMYND15Q9H091 742 aa19.91■□□□□ 0.78
SMARCA4-215ENST00000590574 ACBD3Q9H3P7 528 aa19.91■□□□□ 0.78
SMARCA4-215ENST00000590574 OSBPL3Q9H4L5 887 aa19.91■□□□□ 0.78
SMARCA4-215ENST00000590574 PAG1Q9NWQ8 432 aa19.91■□□□□ 0.78
SMARCA4-215ENST00000590574 NCOA7Q8NI08 942 aa19.91■□□□□ 0.78
SMARCA4-215ENST00000590574 UBXN4Q92575 508 aa19.91■□□□□ 0.78
SMARCA4-215ENST00000590574 KLF18A0A0U1RQI7 1052 aa19.9■□□□□ 0.78
SMARCA4-215ENST00000590574 APOBRQ0VD83 1088 aa19.9■□□□□ 0.78
SMARCA4-215ENST00000590574 DDX21Q9NR30 783 aaKnown RBP eCLIP19.9■□□□□ 0.78
SMARCA4-215ENST00000590574 RAI14Q9P0K7 980 aa19.9■□□□□ 0.78
SMARCA4-215ENST00000590574 SLC12A7Q9Y666 1083 aa19.9■□□□□ 0.78
SMARCA4-215ENST00000590574 GOLGA8AA7E2F4 631 aa19.9■□□□□ 0.78
SMARCA4-215ENST00000590574 TOP1P11387 765 aaKnown RBP19.9■□□□□ 0.78
SMARCA4-215ENST00000590574 CHST3Q7LGC8 479 aa19.9■□□□□ 0.78
SMARCA4-215ENST00000590574 UNC5CLQ8IV45 518 aa19.9■□□□□ 0.78
SMARCA4-215ENST00000590574 CAGE1Q8TC20 777 aa19.9■□□□□ 0.78
SMARCA4-215ENST00000590574 GPTP24298 496 aa19.89■□□□□ 0.78
SMARCA4-215ENST00000590574 NBPF6Q5VWK0 638 aa19.89■□□□□ 0.78
SMARCA4-215ENST00000590574 NBPF4Q96M43 638 aa19.89■□□□□ 0.78
SMARCA4-215ENST00000590574 PAXBP1Q9Y5B6 917 aa19.89■□□□□ 0.78
SMARCA4-215ENST00000590574 CNNM3Q8NE01 707 aa19.89■□□□□ 0.77
SMARCA4-215ENST00000590574 SUCLG2Q96I99 432 aa19.89■□□□□ 0.77
SMARCA4-215ENST00000590574 CCDC129Q6ZRS4 1044 aa19.89■□□□□ 0.77
SMARCA4-215ENST00000590574 EPB41L2O43491 1005 aaKnown RBP19.89■□□□□ 0.77
SMARCA4-215ENST00000590574 MAGEC2Q9UBF1 373 aaPredicted RBP19.89■□□□□ 0.77
SMARCA4-215ENST00000590574 NAP1L1P55209 391 aaKnown RBP19.89■□□□□ 0.77
SMARCA4-215ENST00000590574 C17orf53Q8N3J3 647 aaPredicted RBP19.89■□□□□ 0.77
SMARCA4-215ENST00000590574 TULP4Q9NRJ4 1543 aa19.88■□□□□ 0.77
SMARCA4-215ENST00000590574 CEP131Q9UPN4 1083 aa19.88■□□□□ 0.77
SMARCA4-215ENST00000590574 ANKRD18BA2A2Z9 1011 aa19.88■□□□□ 0.77
SMARCA4-215ENST00000590574 SKILP12757 684 aa19.88■□□□□ 0.77
SMARCA4-215ENST00000590574 MRPS27Q92552 414 aaKnown RBP19.88■□□□□ 0.77
SMARCA4-215ENST00000590574 SSRP1Q08945 709 aaKnown RBP19.88■□□□□ 0.77
SMARCA4-215ENST00000590574 MICU3Q86XE3 530 aa19.88■□□□□ 0.77
SMARCA4-215ENST00000590574 PTPDC1A2A3K4 754 aa19.88■□□□□ 0.77
SMARCA4-215ENST00000590574 IFIT3O14879 490 aaKnown RBP19.88■□□□□ 0.77
SMARCA4-215ENST00000590574 LTKP29376 864 aa19.88■□□□□ 0.77
SMARCA4-215ENST00000590574 METAP2P50579 478 aaKnown RBP eCLIP19.88■□□□□ 0.779e-7■■□□□ 12.7
SMARCA4-215ENST00000590574 AOPEPQ8N6M6 819 aa19.88■□□□□ 0.77
SMARCA4-215ENST00000590574 TRMT112Q9UI30 125 aaKnown RBP19.88■□□□□ 0.77
SMARCA4-215ENST00000590574 KCNQ3O43525 872 aa19.87■□□□□ 0.77
SMARCA4-215ENST00000590574 PIBF1Q8WXW3 757 aa19.87■□□□□ 0.77
SMARCA4-215ENST00000590574 ABCF2Q9UG63 623 aa19.87■□□□□ 0.77
SMARCA4-215ENST00000590574 RGS12O14924 1447 aa19.87■□□□□ 0.77
SMARCA4-215ENST00000590574 IL15P40933 162 aaPredicted RBP19.87■□□□□ 0.77
SMARCA4-215ENST00000590574 LDHAL6AQ6ZMR3 332 aa19.87■□□□□ 0.77
SMARCA4-215ENST00000590574 IQSEC2Q5JU85 1478 aa19.87■□□□□ 0.77
SMARCA4-215ENST00000590574 ZSCAN12O43309 604 aa19.87■□□□□ 0.77
SMARCA4-215ENST00000590574 URI1O94763 535 aaPredicted RBP19.87■□□□□ 0.77
SMARCA4-215ENST00000590574 SNW1Q13573 536 aaKnown RBP19.87■□□□□ 0.77
SMARCA4-215ENST00000590574 STAP2Q9UGK3 403 aa19.87■□□□□ 0.77
SMARCA4-215ENST00000590574 IGHMBP2P38935 993 aaKnown RBP19.86■□□□□ 0.77
SMARCA4-215ENST00000590574 PTH1RQ03431 593 aa19.86■□□□□ 0.77
SMARCA4-215ENST00000590574 CDC37L1Q7L3B6 337 aa19.86■□□□□ 0.77
SMARCA4-215ENST00000590574 PRR36Q9H6K5 1346 aa19.86■□□□□ 0.77
SMARCA4-215ENST00000590574 MINDY4BA8MYZ0 360 aa19.86■□□□□ 0.77
SMARCA4-215ENST00000590574 MAP3K12Q12852 859 aa19.86■□□□□ 0.77
SMARCA4-215ENST00000590574 DHX32Q7L7V1 743 aaKnown RBP19.86■□□□□ 0.77
SMARCA4-215ENST00000590574 IARSP41252 1262 aaKnown RBP19.86■□□□□ 0.77
SMARCA4-215ENST00000590574 KLHL10Q6JEL2 608 aa19.85■□□□□ 0.77
SMARCA4-215ENST00000590574 ME3Q16798 604 aa19.85■□□□□ 0.77
SMARCA4-215ENST00000590574 TMEM67Q5HYA8 995 aa19.85■□□□□ 0.77
SMARCA4-215ENST00000590574 KCNG4Q8TDN1 519 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms