RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 GRAPQ13588 217 aa23.69■■□□□ 1.38
MBD1-223ENST00000590215 CCDC152Q4G0S7 254 aa23.69■■□□□ 1.38
MBD1-223ENST00000590215 GRAPLQ8TC17 118 aaPredicted RBP23.69■■□□□ 1.38
MBD1-223ENST00000590215 FRAT1Q92837 279 aaPredicted RBP23.69■■□□□ 1.38
MBD1-223ENST00000590215 RTL9Q8NET4 1388 aa23.68■■□□□ 1.38
MBD1-223ENST00000590215 CSF1RP07333 972 aa23.68■■□□□ 1.38
MBD1-223ENST00000590215 ZKSCAN2Q63HK3 967 aa23.68■■□□□ 1.38
MBD1-223ENST00000590215 INTS3Q68E01 1043 aaKnown RBP23.68■■□□□ 1.38
MBD1-223ENST00000590215 ARHGAP27Q6ZUM4 889 aa23.68■■□□□ 1.38
MBD1-223ENST00000590215 USP44Q9H0E7 712 aa23.68■■□□□ 1.38
MBD1-223ENST00000590215 RCAN3Q9UKA8 241 aa23.68■■□□□ 1.38
MBD1-223ENST00000590215 CC2D2BQ6DHV5 1058 aa23.67■■□□□ 1.38
MBD1-223ENST00000590215 SNED1Q8TER0 1413 aa23.67■■□□□ 1.38
MBD1-223ENST00000590215 CACNA1SQ13698 1873 aa23.66■■□□□ 1.38
MBD1-223ENST00000590215 PPEF1O14829 653 aaPredicted RBP23.66■■□□□ 1.38
MBD1-223ENST00000590215 NBPF7P0C2Y1 421 aaPredicted RBP23.66■■□□□ 1.38
MBD1-223ENST00000590215 FOXO4P98177 505 aa23.66■■□□□ 1.38
MBD1-223ENST00000590215 TMC4Q7Z404 712 aa23.66■■□□□ 1.38
MBD1-223ENST00000590215 MYH3P11055 1940 aa23.66■■□□□ 1.38
MBD1-223ENST00000590215 CHD4Q14839 1912 aa23.65■■□□□ 1.38
MBD1-223ENST00000590215 NFKBIEO00221 500 aa23.65■■□□□ 1.38
MBD1-223ENST00000590215 CCDC93Q567U6 631 aa23.65■■□□□ 1.38
MBD1-223ENST00000590215 CELF1Q92879 486 aaKnown RBP23.65■■□□□ 1.38
MBD1-223ENST00000590215 ZNF219Q9P2Y4 722 aaPredicted RBP23.65■■□□□ 1.38
MBD1-223ENST00000590215 TNNQ9UQP3 1299 aa23.65■■□□□ 1.38
MBD1-223ENST00000590215 ATP6V0A2Q9Y487 856 aa23.65■■□□□ 1.38
MBD1-223ENST00000590215 LTBP3Q9NS15 1303 aa23.64■■□□□ 1.38
MBD1-223ENST00000590215 GRIPAP1Q4V328 841 aa23.64■■□□□ 1.37
MBD1-223ENST00000590215 OLFM4Q6UX06 510 aa23.64■■□□□ 1.37
MBD1-223ENST00000590215 SP8Q8IXZ3 490 aa23.64■■□□□ 1.37
MBD1-223ENST00000590215 RTKN2Q8IZC4 609 aa23.64■■□□□ 1.37
MBD1-223ENST00000590215 KAZALD1Q96I82 304 aa23.64■■□□□ 1.37
MBD1-223ENST00000590215 SEC31BQ9NQW1 1179 aa23.64■■□□□ 1.37
MBD1-223ENST00000590215 FER1L6Q2WGJ9 1857 aa23.64■■□□□ 1.37
MBD1-223ENST00000590215 RPS8P62241 208 aaKnown RBP23.63■■□□□ 1.37
MBD1-223ENST00000590215 EPHA10Q5JZY3 1008 aa23.63■■□□□ 1.37
MBD1-223ENST00000590215 SUCLG2Q96I99 432 aa23.63■■□□□ 1.37
MBD1-223ENST00000590215 GREM2Q9H772 168 aa23.63■■□□□ 1.37
MBD1-223ENST00000590215 TAF1P21675 1872 aa23.62■■□□□ 1.37
MBD1-223ENST00000590215 CCDC85AQ96PX6 553 aaPredicted RBP23.62■■□□□ 1.37
MBD1-223ENST00000590215 COL4A1P02462 1669 aa23.62■■□□□ 1.37
MBD1-223ENST00000590215 CLUAP1Q96AJ1 413 aa23.61■■□□□ 1.37
MBD1-223ENST00000590215 PRELPP51888 382 aa23.6■■□□□ 1.37
MBD1-223ENST00000590215 RASSF7Q02833 373 aa23.6■■□□□ 1.37
MBD1-223ENST00000590215 RABL6Q3YEC7 729 aaPredicted RBP23.6■■□□□ 1.37
MBD1-223ENST00000590215 SLC51AQ86UW1 340 aa23.6■■□□□ 1.37
MBD1-223ENST00000590215 DZIP1LQ8IYY4 767 aaKnown RBP23.6■■□□□ 1.37
MBD1-223ENST00000590215 CDC5LQ99459 802 aaKnown RBP23.6■■□□□ 1.37
MBD1-223ENST00000590215 PSMD1Q99460 953 aa23.6■■□□□ 1.37
MBD1-223ENST00000590215 TAOK3Q9H2K8 898 aa23.6■■□□□ 1.37
MBD1-223ENST00000590215 ITGA6P23229 1130 aa23.59■■□□□ 1.37
MBD1-223ENST00000590215 FKBP4Q02790 459 aaKnown RBP eCLIP23.59■■□□□ 1.37
MBD1-223ENST00000590215 FAM161AQ3B820 660 aa23.59■■□□□ 1.37
MBD1-223ENST00000590215 LMBR1LQ6UX01 489 aa23.59■■□□□ 1.37
MBD1-223ENST00000590215 TMEM57Q8N5G2 664 aa23.59■■□□□ 1.37
MBD1-223ENST00000590215 RLBP1P12271 317 aa23.58■■□□□ 1.37
MBD1-223ENST00000590215 LMNB1P20700 586 aa23.58■■□□□ 1.37
MBD1-223ENST00000590215 ANKRD18AQ8IVF6 992 aa23.58■■□□□ 1.37
MBD1-223ENST00000590215 TMX4Q9H1E5 349 aaPredicted RBP23.58■■□□□ 1.37
MBD1-223ENST00000590215 SBF1O95248 1867 aa23.58■■□□□ 1.36
MBD1-223ENST00000590215 LRRC37AA6NMS7 1700 aa23.57■■□□□ 1.36
MBD1-223ENST00000590215 ANKRD44Q8N8A2 993 aa23.57■■□□□ 1.36
MBD1-223ENST00000590215 MEIS3Q99687 375 aa23.57■■□□□ 1.36
MBD1-223ENST00000590215 RTFDC1Q9BY42 306 aaPredicted RBP23.57■■□□□ 1.36
MBD1-223ENST00000590215 BICC1Q9H694 974 aaKnown RBP23.57■■□□□ 1.36
MBD1-223ENST00000590215 UBTFL1P0CB47 393 aaPredicted RBP23.56■■□□□ 1.36
MBD1-223ENST00000590215 C9orf131Q5VYM1 1079 aa23.56■■□□□ 1.36
MBD1-223ENST00000590215 FTSJ3Q8IY81 847 aaKnown RBP23.56■■□□□ 1.36
MBD1-223ENST00000590215 BSDC1Q9NW68 430 aaPredicted RBP23.56■■□□□ 1.36
MBD1-223ENST00000590215 HDAC5Q9UQL6 1122 aa23.56■■□□□ 1.36
MBD1-223ENST00000590215 ANKRD18BA2A2Z9 1011 aa23.55■■□□□ 1.36
MBD1-223ENST00000590215 GNAI3P08754 354 aa23.55■■□□□ 1.36
MBD1-223ENST00000590215 MS4A1P11836 297 aa23.55■■□□□ 1.36
MBD1-223ENST00000590215 IFIT5Q13325 482 aaKnown RBP23.55■■□□□ 1.36
MBD1-223ENST00000590215 MPNDQ8N594 471 aa23.54■■□□□ 1.36
MBD1-223ENST00000590215 YY1P25490 414 aa23.53■■□□□ 1.36
MBD1-223ENST00000590215 IGHMBP2P38935 993 aaKnown RBP23.53■■□□□ 1.36
MBD1-223ENST00000590215 PODXL2Q9NZ53 605 aa23.53■■□□□ 1.36
MBD1-223ENST00000590215 RNF181Q9P0P0 153 aa23.53■■□□□ 1.36
MBD1-223ENST00000590215 CCDC57Q2TAC2 916 aa23.52■■□□□ 1.36
MBD1-223ENST00000590215 DPP8Q6V1X1 898 aaPredicted RBP23.52■■□□□ 1.36
MBD1-223ENST00000590215 VPS33BQ9H267 617 aa23.52■■□□□ 1.36
MBD1-223ENST00000590215 ZNF277Q9NRM2 450 aaPredicted RBP23.52■■□□□ 1.36
MBD1-223ENST00000590215 CHMP3Q9Y3E7 222 aa23.52■■□□□ 1.36
MBD1-223ENST00000590215 ZC3H4Q9UPT8 1303 aaKnown RBP23.52■■□□□ 1.36
MBD1-223ENST00000590215 PLIN1O60240 522 aa23.51■■□□□ 1.35
MBD1-223ENST00000590215 PANK1Q8TE04 598 aa23.51■■□□□ 1.35
MBD1-223ENST00000590215 MINPP1Q9UNW1 487 aa23.51■■□□□ 1.35
MBD1-223ENST00000590215 ZBTB7BO15156 539 aaPredicted RBP23.5■■□□□ 1.35
MBD1-223ENST00000590215 IARSP41252 1262 aaKnown RBP23.5■■□□□ 1.35
MBD1-223ENST00000590215 GPSM2P81274 684 aa23.5■■□□□ 1.35
MBD1-223ENST00000590215 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.5■■□□□ 1.35
MBD1-223ENST00000590215 SUPT20HQ8NEM7 779 aa23.5■■□□□ 1.35
MBD1-223ENST00000590215 LRRFIP2Q9Y608 721 aaKnown RBP23.5■■□□□ 1.35
MBD1-223ENST00000590215 LTBP1Q14766 1721 aa23.5■■□□□ 1.35
MBD1-223ENST00000590215 DUOX1Q9NRD9 1551 aa23.49■■□□□ 1.35
MBD1-223ENST00000590215 PDE3AQ14432 1141 aa23.49■■□□□ 1.35
MBD1-223ENST00000590215 ITPRIPQ8IWB1 547 aa23.49■■□□□ 1.35
MBD1-223ENST00000590215 MPHOSPH8Q99549 860 aa23.49■■□□□ 1.35
MBD1-223ENST00000590215 NSFL1CQ9UNZ2 370 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms