RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 BBOX1O75936 387 aa23.06■■□□□ 1.28
CIRBP-227ENST00000590188 SF3B3Q15393 1217 aaKnown RBP23.06■■□□□ 1.28
CIRBP-227ENST00000590188 COL4A1P02462 1669 aa23.06■■□□□ 1.28
CIRBP-227ENST00000590188 VEGFAP15692 232 aaPredicted RBP23.05■■□□□ 1.28
CIRBP-227ENST00000590188 COL4A5P29400 1685 aa23.04■■□□□ 1.28
CIRBP-227ENST00000590188 POTECB2RU33 542 aa23.04■■□□□ 1.28
CIRBP-227ENST00000590188 SP8Q8IXZ3 490 aa23.04■■□□□ 1.28
CIRBP-227ENST00000590188 LARGE2Q8N3Y3 721 aa23.04■■□□□ 1.28
CIRBP-227ENST00000590188 JDP2Q8WYK2 163 aa23.04■■□□□ 1.28
CIRBP-227ENST00000590188 SEC31BQ9NQW1 1179 aa23.04■■□□□ 1.28
CIRBP-227ENST00000590188 NEURL1BA8MQ27 555 aa23.03■■□□□ 1.28
CIRBP-227ENST00000590188 AOC3Q16853 763 aa23.03■■□□□ 1.28
CIRBP-227ENST00000590188 DIEXFQ68CQ4 756 aaKnown RBP23.03■■□□□ 1.28
CIRBP-227ENST00000590188 DPP8Q6V1X1 898 aaPredicted RBP23.03■■□□□ 1.28
CIRBP-227ENST00000590188 RBM46Q8TBY0 533 aaKnown RBP23.03■■□□□ 1.28
CIRBP-227ENST00000590188 DNAAF4Q8WXU2 420 aa23.03■■□□□ 1.28
CIRBP-227ENST00000590188 WDR90Q96KV7 1748 aa23.02■■□□□ 1.28
CIRBP-227ENST00000590188 F6X3S4 739 aa23.02■■□□□ 1.28
CIRBP-227ENST00000590188 PPIP5K2O43314 1243 aa23.02■■□□□ 1.28
CIRBP-227ENST00000590188 PDE8AO60658 829 aa23.02■■□□□ 1.28
CIRBP-227ENST00000590188 HSPA6P17066 643 aa23.02■■□□□ 1.28
CIRBP-227ENST00000590188 GRIPAP1Q4V328 841 aa23.02■■□□□ 1.28
CIRBP-227ENST00000590188 MPNDQ8N594 471 aa23.02■■□□□ 1.28
CIRBP-227ENST00000590188 CDCA7LQ96GN5 454 aa23.01■■□□□ 1.27
CIRBP-227ENST00000590188 E9PSI1 815 aa23■■□□□ 1.27
CIRBP-227ENST00000590188 FZD9O00144 591 aa23■■□□□ 1.27
CIRBP-227ENST00000590188 HSP90B1P14625 803 aaKnown RBP23■■□□□ 1.27
CIRBP-227ENST00000590188 CCDC152Q4G0S7 254 aa23■■□□□ 1.27
CIRBP-227ENST00000590188 MIER1Q8N108 512 aa23■■□□□ 1.27
CIRBP-227ENST00000590188 UBE3BQ7Z3V4 1068 aa22.99■■□□□ 1.27
CIRBP-227ENST00000590188 NIM1KQ8IY84 436 aa22.99■■□□□ 1.27
CIRBP-227ENST00000590188 GJA3Q9Y6H8 435 aa22.99■■□□□ 1.27
CIRBP-227ENST00000590188 CDHR2Q9BYE9 1310 aa22.99■■□□□ 1.27
CIRBP-227ENST00000590188 EIF6P56537 245 aaKnown RBP22.98■■□□□ 1.27
CIRBP-227ENST00000590188 SLFN5Q08AF3 891 aa22.98■■□□□ 1.27
CIRBP-227ENST00000590188 TMC4Q7Z404 712 aa22.98■■□□□ 1.27
CIRBP-227ENST00000590188 SUPT20HQ8NEM7 779 aa22.98■■□□□ 1.27
CIRBP-227ENST00000590188 CTSWP56202 376 aa22.97■■□□□ 1.27
CIRBP-227ENST00000590188 RPS8P62241 208 aaKnown RBP22.97■■□□□ 1.27
CIRBP-227ENST00000590188 GCKRQ14397 625 aa22.97■■□□□ 1.27
CIRBP-227ENST00000590188 RTFDC1Q9BY42 306 aaPredicted RBP22.97■■□□□ 1.27
CIRBP-227ENST00000590188 NSFL1CQ9UNZ2 370 aaKnown RBP22.97■■□□□ 1.27
CIRBP-227ENST00000590188 CACNA1FO60840 1977 aa22.96■■□□□ 1.27
CIRBP-227ENST00000590188 POTEIP0CG38 1075 aa22.96■■□□□ 1.27
CIRBP-227ENST00000590188 POTEJP0CG39 1038 aa22.96■■□□□ 1.27
CIRBP-227ENST00000590188 GPSM2P81274 684 aa22.96■■□□□ 1.27
CIRBP-227ENST00000590188 SMC1BQ8NDV3 1235 aa22.96■■□□□ 1.27
CIRBP-227ENST00000590188 LINS1Q8NG48 757 aa22.96■■□□□ 1.27
CIRBP-227ENST00000590188 LRRC37AA6NMS7 1700 aa22.96■■□□□ 1.27
CIRBP-227ENST00000590188 H7C1W4 665 aa22.95■■□□□ 1.26
CIRBP-227ENST00000590188 FSTL1Q12841 308 aa22.95■■□□□ 1.26
CIRBP-227ENST00000590188 GPR101Q96P66 508 aaPredicted RBP22.95■■□□□ 1.26
CIRBP-227ENST00000590188 DUOX1Q9NRD9 1551 aa22.95■■□□□ 1.26
CIRBP-227ENST00000590188 SLC4A10Q6U841 1118 aa22.94■■□□□ 1.26
CIRBP-227ENST00000590188 L3MBTL3Q96JM7 780 aaPredicted RBP22.94■■□□□ 1.26
CIRBP-227ENST00000590188 BCL2L13Q9BXK5 485 aa22.94■■□□□ 1.26
CIRBP-227ENST00000590188 GREM2Q9H772 168 aa22.94■■□□□ 1.26
CIRBP-227ENST00000590188 IQCA1LA6NCM1 817 aa22.93■■□□□ 1.26
CIRBP-227ENST00000590188 C6orf229H3BNL8 230 aa22.93■■□□□ 1.26
CIRBP-227ENST00000590188 RIMBP2O15034 1052 aa22.93■■□□□ 1.26
CIRBP-227ENST00000590188 KIAA2012Q0VF49 1180 aa22.93■■□□□ 1.26
CIRBP-227ENST00000590188 EAPPQ56P03 285 aaPredicted RBP22.93■■□□□ 1.26
CIRBP-227ENST00000590188 BEND3Q5T5X7 828 aa22.93■■□□□ 1.26
CIRBP-227ENST00000590188 ANKRD18AQ8IVF6 992 aa22.93■■□□□ 1.26
CIRBP-227ENST00000590188 GPC2Q8N158 579 aa22.93■■□□□ 1.26
CIRBP-227ENST00000590188 TTLL11Q8NHH1 800 aa22.93■■□□□ 1.26
CIRBP-227ENST00000590188 HACL1Q9UJ83 578 aa22.93■■□□□ 1.26
CIRBP-227ENST00000590188 HTRA3P83110 453 aa22.92■■□□□ 1.26
CIRBP-227ENST00000590188 MRPL50Q8N5N7 158 aaKnown RBP22.92■■□□□ 1.26
CIRBP-227ENST00000590188 TAF1DQ9H5J8 278 aaPredicted RBP22.92■■□□□ 1.26
CIRBP-227ENST00000590188 POLLQ9UGP5 575 aa22.92■■□□□ 1.26
CIRBP-227ENST00000590188 CASP7P55210 303 aa22.91■■□□□ 1.26
CIRBP-227ENST00000590188 VPS33BQ9H267 617 aa22.91■■□□□ 1.26
CIRBP-227ENST00000590188 ANKIB1Q9P2G1 1089 aa22.91■■□□□ 1.26
CIRBP-227ENST00000590188 WASHC4Q2M389 1173 aa22.9■■□□□ 1.26
CIRBP-227ENST00000590188 SSH1Q8WYL5 1049 aa22.9■■□□□ 1.26
CIRBP-227ENST00000590188 CDC5LQ99459 802 aaKnown RBP22.9■■□□□ 1.26
CIRBP-227ENST00000590188 ZNRF3Q9ULT6 936 aa22.9■■□□□ 1.26
CIRBP-227ENST00000590188 MYH3P11055 1940 aa22.89■■□□□ 1.25
CIRBP-227ENST00000590188 RAD17O75943 681 aa22.89■■□□□ 1.25
CIRBP-227ENST00000590188 UFL1O94874 794 aa22.89■■□□□ 1.25
CIRBP-227ENST00000590188 EPHX2P34913 555 aa22.89■■□□□ 1.25
CIRBP-227ENST00000590188 APLP1P51693 650 aa22.89■■□□□ 1.25
CIRBP-227ENST00000590188 CXCL9Q07325 125 aa22.89■■□□□ 1.25
CIRBP-227ENST00000590188 TBC1D16Q8TBP0 767 aa22.89■■□□□ 1.25
CIRBP-227ENST00000590188 DBNDD1Q9H9R9 158 aa22.89■■□□□ 1.25
CIRBP-227ENST00000590188 SCN4AP35499 1836 aa22.89■■□□□ 1.25
CIRBP-227ENST00000590188 SPEF2Q9C093 1822 aa22.88■■□□□ 1.25
CIRBP-227ENST00000590188 DOK7Q18PE1 504 aa22.88■■□□□ 1.25
CIRBP-227ENST00000590188 FAM161AQ3B820 660 aa22.88■■□□□ 1.25
CIRBP-227ENST00000590188 CLEC11AQ9Y240 323 aa22.88■■□□□ 1.25
CIRBP-227ENST00000590188 YDJCA8MPS7 323 aa22.87■■□□□ 1.25
CIRBP-227ENST00000590188 LMOD1P29536 600 aaPredicted RBP22.87■■□□□ 1.25
CIRBP-227ENST00000590188 CHADLQ6NUI6 762 aa22.87■■□□□ 1.25
CIRBP-227ENST00000590188 EYA3Q99504 573 aa22.87■■□□□ 1.25
CIRBP-227ENST00000590188 PLA2G12BQ9BX93 195 aa22.87■■□□□ 1.25
CIRBP-227ENST00000590188 GGA1Q9UJY5 639 aa22.87■■□□□ 1.25
CIRBP-227ENST00000590188 CHMP3Q9Y3E7 222 aa22.87■■□□□ 1.25
CIRBP-227ENST00000590188 LTBP1Q14766 1721 aa22.86■■□□□ 1.25
CIRBP-227ENST00000590188 ITGA6P23229 1130 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms